Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05172 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.6e-85 317.0 148 100.0
Thecc.02G260600 Theobroma cacao HOM05D000004 ORTHO05D000002 7.1e-14 81.3 164 33.5
ECA246G4747 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-11 73.2 52 63.5
ECA246G1983 Erigeron canadensis HOM05D000006 ORTHO05D000002 3.6e-10 68.9 52 61.5
ECA233G5904 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.2e-10 68.2 45 68.9
ECA238G4528 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 67.4 47 63.8
SEGI_31387 Sequoiadendron giganteum HOM05D011014 ORTHO05D018383 1.1e-09 67.4 50 62.0
ECA238G2710 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-09 66.6 45 66.7
FvH4_2g19253 Fragaria vesca HOM05D000004 ORTHO05D000002 1.8e-09 66.6 52 61.5
ECA236G4266 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-09 65.9 45 66.7
PGR119G1043 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-08 63.5 45 68.9
RcHm_v2.0_Chr5g0015161 Rosa chinensis HOM05D000004 ORTHO05D000002 1.5e-08 63.5 45 64.4
Thecc.03G066200 Theobroma cacao HOM05D000004 ORTHO05D000002 1.5e-08 63.5 51 54.9
ECA240G2139 Erigeron canadensis HOM05D000006 ORTHO05D000002 2.0e-08 63.2 52 57.7
ECA246G1685 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.0e-08 63.2 52 51.9
ECA248G3755 Erigeron canadensis HOM05D000006 ORTHO05D000002 2.0e-08 63.2 52 51.9
PGR031G1747 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-08 63.2 45 68.9
QL02p062220 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-08 63.2 45 62.2
QL05p084077 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-08 63.2 45 62.2
QL93p0053_0688 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-08 63.2 45 62.2
HanXRQChr10g0318501 Helianthus annuus HOM05D000004 ORTHO05D000002 2.6e-08 62.8 52 51.9
QL04p062382 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-08 62.8 45 62.2
QL05p006270 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-08 62.8 45 60.0
HanXRQChr10g0295111 Helianthus annuus HOM05D000004 ORTHO05D000002 3.4e-08 62.4 47 61.7
QL12p028861 Quercus lobata HOM05D000004 ORTHO05D000002 3.4e-08 62.4 42 64.3
BraA04t16042Z Brassica rapa HOM05D000104 ORTHO05D005891 4.4e-08 62.0 46 58.7
ECA246G2782 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-08 62.0 47 57.4
PSO675G2742 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-08 62.0 45 60.0
QL93p0107_0358 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-08 62.0 45 57.8
PSO801G0002 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-08 61.6 45 64.4
SHI15021 Sapria himalayana HOM05D000004 ORTHO05D000002 5.8e-08 61.6 45 64.4
FvH4_4g12741 Fragaria vesca HOM05D000004 ORTHO05D000002 7.6e-08 61.2 53 52.8
Atru.chr7.393 Acer truncatum HOM05D000004 ORTHO05D000002 9.9e-08 60.8 44 63.6
CsaV3_1G014410 Cucumis sativus L. HOM05D000004 ORTHO05D000002 9.9e-08 60.8 45 60.0
ECA236G4557 Erigeron canadensis HOM05D000006 ORTHO05D000002 9.9e-08 60.8 47 59.6
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.9e-08 60.8 52 53.8
ECA248G2613 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.9e-08 60.8 47 59.6
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 9.9e-08 60.8 45 60.0
SEGI_10649 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 9.9e-08 60.8 52 55.8
Atru.chr12.2199 Acer truncatum HOM05D000004 ORTHO05D000002 1.3e-07 60.5 47 59.6
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 47 59.6
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 1.3e-07 60.5 47 59.6
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 1.3e-07 60.5 47 59.6
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 1.3e-07 60.5 47 59.6
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 60.5 45 57.8
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 1.3e-07 60.5 45 57.8
HanXRQChr02g0039061 Helianthus annuus HOM05D000004 ORTHO05D000002 1.7e-07 60.1 47 59.6
QL04p013037 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 60.0
QL05p008770 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 57.8
QL11p032775 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 60.0
SHI07308 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 60.0
SHI08945 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI20505 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI33973 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI50378 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI50759 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI50872 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI51648 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI51847 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI51873 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
SHI54723 Sapria himalayana HOM05D000004 ORTHO05D000002 1.7e-07 60.1 45 62.2
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 2.2e-07 59.7 47 57.4
QL01p015808 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-07 59.7 45 57.8
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-07 59.7 45 57.8
SHI03109 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 59.7 45 62.2
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-07 59.3 47 57.4
SHI54655 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-07 59.3 51 54.9
SHI55032 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-07 59.3 51 54.9
SEGI_18177 Sequoiadendron giganteum HOM05D000291 ORTHO05D001358 2.9e-07 59.3 51 56.9
TWI59G1271 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.9e-07 59.3 50 60.0
CBR_g51637 Chara braunii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 62 46.8
TWI36G1097 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 47 55.3
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-07 58.5 50 56.0
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-07 58.5 50 56.0
Manes.10G036329 Manihot esculenta HOM05D000004 ORTHO05D000002 4.9e-07 58.5 51 54.9
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-07 58.5 57 50.9
SHI47463 Sapria himalayana HOM05D000004 ORTHO05D000002 4.9e-07 58.5 45 60.0
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.9e-07 58.5 48 54.2
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 6.4e-07 58.2 46 54.3
TWI12G0374 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-07 58.2 47 55.3
TWI38G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-07 58.2 45 55.6
TWI74G1083 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-07 58.2 47 55.3
ClCG02G009860 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.4e-07 57.8 46 54.3
PSO591G0211 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-07 57.8 47 57.4
QL05p061522 Quercus lobata HOM05D000004 ORTHO05D000002 8.4e-07 57.8 45 57.8
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 8.4e-07 57.8 43 60.5
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.4e-07 57.8 45 55.6
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 57.4 48 56.2
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 1.1e-06 57.4 47 57.4
Atru.chr10.1013 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 47 53.2
CSS0004631 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-06 56.6 50 54.0
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-06 56.6 45 57.8
QL02p103579 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-06 56.6 84 41.7
RcHm_v2.0_Chr3g0452401 Rosa chinensis HOM05D000004 ORTHO05D000002 1.9e-06 56.6 44 54.5
SEGI_39755 Sequoiadendron giganteum HOM05D001337 ORTHO05D000002 1.9e-06 56.6 52 53.8
CBR_g49087 Chara braunii HOM05D000004 ORTHO05D000002 2.4e-06 56.2 63 44.4
ECA240G3715 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-06 56.2 47 55.3
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-06 55.8 50 54.0
CBR_g31545 Chara braunii HOM05D000004 ORTHO05D000002 3.2e-06 55.8 62 45.2
ECA247G0539 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.2e-06 55.8 52 50.0
SGA_v2.0_scaffold147G36312 Striga asiatica HOM05D000004 ORTHO05D000002 3.2e-06 55.8 45 62.2
TWI39G0034 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.2e-06 55.8 47 53.2
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 50 54.0
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 50 52.0
CBR_g40461 Chara braunii HOM05D000004 ORTHO05D000002 4.2e-06 55.5 64 43.8
ECA232G3998 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 47 55.3
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 4.2e-06 55.5 39 59.0
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.2e-06 55.5 42 59.5
CAN.G195.22 Capsicum annuum HOM05D000004 ORTHO05D000002 5.4e-06 55.1 43 58.1
CBR_g23024 Chara braunii HOM05D000004 ORTHO05D000002 5.4e-06 55.1 62 45.2
CBR_g32086 Chara braunii HOM05D000004 ORTHO05D000002 5.4e-06 55.1 62 45.2
ECA236G1880 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.4e-06 55.1 47 55.3
ECA240G3660 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.4e-06 55.1 47 53.2
ECA246G5264 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.4e-06 55.1 47 55.3
PSO017G4948 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-06 55.1 45 55.6
SEGI_27746 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.4e-06 55.1 38 63.2
Ah.01g015870 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.1e-06 54.7 52 50.0
Ah.10g032230 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.1e-06 54.7 52 50.0
CBR_g11021 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 45 55.6
CBR_g19380 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 45 55.6
CBR_g22860 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 45.2
CBR_g31825 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 43.5
CBR_g34244 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 43.5
CBR_g38496 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 45.2
CBR_g44522 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 45.2
CBR_g49900 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 45.2
CBR_g59767 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 43.5
CBR_g919 Chara braunii HOM05D000004 ORTHO05D000002 7.1e-06 54.7 62 45.2
ECA236G3268 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 54.7 47 55.3
ECA238G0032 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-06 54.7 42 57.1
PSO063G7105 Papaver somniferum HOM05D010112 ORTHO05D000002 7.1e-06 54.7 44 56.8
CBR_g18819 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 61 45.9
CBR_g28578 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g29674 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g30277 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 60 46.7
CBR_g32560 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 60 46.7
CBR_g34894 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g4011 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 45.2
CBR_g40460 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g40849 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g44302 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g46626 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g52248 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g5755 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g8255 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
CBR_g8655 Chara braunii HOM05D000004 ORTHO05D000002 9.2e-06 54.3 62 43.5
ECA232G0139 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-06 54.3 52 50.0
ECA232G0404 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-06 54.3 47 57.4
ECA238G1014 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-06 54.3 47 55.3
ECA246G4700 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-06 54.3 46 52.2


User provided reference genes

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