Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05118 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 9.9e-83 310.1 156 100.0
SEGI_04582 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 7.3e-62 240.7 126 96.8
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 1.8e-20 103.2 78 59.0
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 9.1e-20 100.9 78 57.7
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 1.3e-18 97.1 78 55.1
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 2.9e-18 95.9 83 51.8
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 1.1e-17 94.0 81 53.1
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 1.4e-17 93.6 78 52.6
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 2.5e-17 92.8 81 49.4
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 2.5e-17 92.8 78 52.6
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 3.2e-17 92.4 78 51.3
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 5.5e-17 91.7 78 48.7
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 5.5e-17 91.7 84 50.0
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 5.5e-17 91.7 84 50.0
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 7.2e-17 91.3 80 51.2
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 7.2e-17 91.3 82 51.2
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 7.2e-17 91.3 78 53.8
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 9.4e-17 90.9 84 50.0
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 9.4e-17 90.9 82 51.2
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 1.2e-16 90.5 79 54.4
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 1.2e-16 90.5 79 51.9
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 1.2e-16 90.5 82 51.2
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 1.2e-16 90.5 86 47.7
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 1.6e-16 90.1 78 48.7
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.6e-16 90.1 82 51.2
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 1.6e-16 90.1 78 50.0
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 2.1e-16 89.7 78 52.6
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 3.6e-16 89.0 78 51.3
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 4.7e-16 88.6 78 51.3
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 6.1e-16 88.2 78 50.0
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 6.1e-16 88.2 78 50.0
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 8.0e-16 87.8 78 51.3
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 8.0e-16 87.8 78 47.4
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 8.0e-16 87.8 78 50.0
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 1.0e-15 87.4 78 48.7
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 1.0e-15 87.4 78 50.0
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 1.4e-15 87.0 78 51.3
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 1.8e-15 86.7 78 48.7
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 2.3e-15 86.3 67 55.2
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 2.3e-15 86.3 80 48.8
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 2.3e-15 86.3 78 51.3
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 2.3e-15 86.3 78 51.3
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 3.9e-15 85.5 78 50.0
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 3.9e-15 85.5 78 50.0
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 5.2e-15 85.1 78 51.3
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 5.2e-15 85.1 105 40.0
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 6.7e-15 84.7 78 47.4
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 6.7e-15 84.7 78 48.7
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 6.7e-15 84.7 86 46.5
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 6.7e-15 84.7 78 50.0
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 8.8e-15 84.3 78 50.0
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 8.8e-15 84.3 78 47.4
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 1.1e-14 84.0 78 48.7
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 1.5e-14 83.6 78 48.7
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 1.5e-14 83.6 82 47.6
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 1.5e-14 83.6 78 47.4
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 2.0e-14 83.2 78 47.4
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 2.0e-14 83.2 93 47.3
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 2.6e-14 82.8 78 47.4
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 2.6e-14 82.8 78 47.4
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 2.6e-14 82.8 78 47.4
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 5.7e-14 81.6 78 50.0
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 5.7e-14 81.6 78 48.7
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 1.3e-13 80.5 78 48.7
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 1.3e-13 80.5 74 48.6
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 2.2e-13 79.7 78 44.9
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 4.8e-13 78.6 89 44.9
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 4.8e-13 78.6 89 44.9
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 2.4e-12 76.3 84 45.2
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 2.4e-12 76.3 84 45.2
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 2.4e-12 76.3 84 45.2
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 2.4e-12 76.3 77 46.8
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 2.4e-12 76.3 84 44.0
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 4.1e-12 75.5 84 42.9
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 5.3e-12 75.1 84 44.0
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 5.3e-12 75.1 84 45.2
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 7.0e-12 74.7 78 47.4
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 9.1e-12 74.3 68 48.5
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 1.2e-11 73.9 84 42.9
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 1.6e-11 73.6 73 46.6
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 5.9e-11 71.6 84 42.9
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 7.7e-11 71.2 84 42.9
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 7.7e-11 71.2 78 44.9
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 1.0e-10 70.9 69 42.0
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 1.3e-10 70.5 69 46.4
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 2.2e-10 69.7 78 42.3
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 2.9e-10 69.3 106 35.8
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 3.8e-10 68.9 102 34.3
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 5.0e-10 68.6 68 45.6
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 5.0e-10 68.6 84 40.5
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 6.5e-10 68.2 155 32.3
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 1.9e-09 66.6 68 41.2
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 3.2e-09 65.9 85 38.8
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 7.2e-09 64.7 69 43.5
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 9.4e-09 64.3 50 54.0
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 1.6e-08 63.5 78 42.3
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 4.7e-08 62.0 69 42.0
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 1.0e-07 60.8 137 29.2
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 2.0e-06 56.6 76 35.5
CBR_g52628 Chara braunii HOM05D006959 ORTHO05D008808 2.6e-06 56.2 62 46.8
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 7.5e-06 54.7 78 37.2


User provided reference genes

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