Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05043 Sequoiadendron giganteum HOM05D001710 ORTHO05D386609 2.3e-48 195.3 101 100.0
SEGI_21832 Sequoiadendron giganteum HOM05D001710 ORTHO05D001939 1.5e-15 86.3 116 48.3
Mapoly0056s0142 Marchantia polymorpha HOM05D001710 ORTHO05D001939 8.8e-08 60.5 56 55.4
Mapoly0048s0006 Marchantia polymorpha HOM05D001710 ORTHO05D001939 2.0e-07 59.3 56 55.4
Pp3c15_23960 Physcomitrium patens HOM05D001710 ORTHO05D001939 2.0e-07 59.3 56 57.1
AagrBONN_evm.TU.Sc2ySwM_362.2278 Anthoceros agrestis HOM05D001710 ORTHO05D001939 9.7e-07 57.0 56 51.8
Pp3c9_24310 Physcomitrium patens HOM05D001710 ORTHO05D001939 9.7e-07 57.0 56 51.8
Nn8g38736 Nelumbo nucifera HOM05D001710 ORTHO05D001939 1.3e-06 56.6 56 53.6
Nn6g35579 Nelumbo nucifera HOM05D001710 ORTHO05D001939 1.7e-06 56.2 56 51.8
Solyc04g005160.3 Solanum lycopersicum HOM05D001710 ORTHO05D001939 1.7e-06 56.2 56 53.6
Sopen04g001170 Solanum pennellii HOM05D001710 ORTHO05D001939 1.7e-06 56.2 56 53.6
PGSC0003DMG400001932 Solanum tuberosum HOM05D001710 ORTHO05D001939 1.7e-06 56.2 56 53.6
CAN.G184.14 Capsicum annuum HOM05D001710 ORTHO05D001939 2.2e-06 55.8 56 51.8
CARHR212890 Cardamine hirsuta HOM05D001710 ORTHO05D001939 2.2e-06 55.8 56 51.8
Solyc12g040570.1 Solanum lycopersicum HOM05D001710 ORTHO05D001939 2.2e-06 55.8 56 51.8
PGSC0003DMG400025121 Solanum tuberosum HOM05D001710 ORTHO05D001939 2.2e-06 55.8 56 51.8
BcaB06g27642 Brassica carinata HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
BcaC02g08939 Brassica carinata HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
A04p14780 Brassica napus HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
C04p48710 Brassica napus HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
BolC4t26459H Brassica oleracea HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
BraA04t17116Z Brassica rapa HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
CiPaw.12G086400 Carya illinoinensis HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 51.8
PSO421G0217 Papaver somniferum HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 50.0
Rhsim02G0239600 Rhododendron simsii HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 51.8
Solyc05g010260.4 Solanum lycopersicum HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 51.8
Sopen05g006030 Solanum pennellii HOM05D001710 ORTHO05D001939 2.8e-06 55.5 56 51.8
CiPaw.11G125800 Carya illinoinensis HOM05D001710 ORTHO05D001939 3.7e-06 55.1 56 51.8
Nitab4.5_0000149g0150 Nicotiana tabacum HOM05D001710 ORTHO05D001939 3.7e-06 55.1 56 51.8
Nitab4.5_0005310g0010 Nicotiana tabacum HOM05D001710 ORTHO05D001939 3.7e-06 55.1 56 51.8
Thecc.03G291000 Theobroma cacao HOM05D001710 ORTHO05D001939 3.7e-06 55.1 56 50.0
TAR383G0852 Trochodendron aralioides HOM05D001710 ORTHO05D001939 3.7e-06 55.1 56 51.8
CAN.G868.14 Capsicum annuum HOM05D001710 ORTHO05D001939 4.8e-06 54.7 56 50.0
Hma1.2p1_1369F.1_g278580 Hydrangea macrophylla HOM05D001710 ORTHO05D001939 4.8e-06 54.7 56 50.0
TAR624G0361 Trochodendron aralioides HOM05D001710 ORTHO05D014486 4.8e-06 54.7 56 48.2
Aqoxy4G02823 Aquilegia oxysepala HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 50.0
COL.COLO4_21743 Corchorus olitorius HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 50.0
Peaxi162Scf00396g00134 Petunia axillaris HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 51.8
Solyc12g056120.1 Solanum lycopersicum HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 50.0
Sopen12g028630 Solanum pennellii HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 50.0
PGSC0003DMG400043373 Solanum tuberosum HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 50.0
TWI60G1257 Tripterygium wilfordii HOM05D001710 ORTHO05D001939 6.3e-06 54.3 64 46.9
TWI81G0007 Tripterygium wilfordii HOM05D001710 ORTHO05D001939 6.3e-06 54.3 64 46.9
vmacro11463 Vaccinium macrocarpon HOM05D001710 ORTHO05D001939 6.3e-06 54.3 56 50.0
Actinidia04220 Actinidia chinensis HOM05D001710 ORTHO05D001939 8.2e-06 53.9 56 50.0
CANSAT21G2225 Cannabis sativa HOM05D001710 ORTHO05D001939 8.2e-06 53.9 56 50.0
Phvul.002G295300 Phaseolus vulgaris HOM05D001710 ORTHO05D001939 8.2e-06 53.9 56 51.8
PGR031G0666 Punica granatum HOM05D001710 ORTHO05D001939 8.2e-06 53.9 56 50.0
TPR.G14742 Trifolium pratense HOM05D001710 ORTHO05D001939 8.2e-06 53.9 56 50.0


User provided reference genes

Program Settings