Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04975 Sequoiadendron giganteum HOM05D002103 ORTHO05D007890 1.9e-150 535.8 268 100.0
Nn5g30226 Nelumbo nucifera HOM05D002103 ORTHO05D007890 4.0e-23 112.8 187 37.4
CARHR261220 Cardamine hirsuta HOM05D002103 ORTHO05D007890 5.7e-22 109.0 182 36.3
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 1.3e-21 107.8 191 35.1
Ciclev10003422m.g Citrus clementina HOM05D002103 ORTHO05D007890 3.7e-21 106.3 189 36.0
Potri.014G032000 Populus trichocarpa HOM05D002103 ORTHO05D007890 3.7e-21 106.3 187 34.8
HPP92_016731 Vanilla planifolia HOM05D002103 ORTHO05D007890 4.8e-21 105.9 194 34.5
Aqoxy1G02088 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 6.3e-21 105.5 197 35.0
Haze_18960 Corylus avellana HOM05D002103 ORTHO05D007890 6.3e-21 105.5 181 34.8
Os09g0460000 Oryza sativa ssp. japonica HOM05D002103 ORTHO05D007890 8.3e-21 105.1 183 34.4
Phvul.011G031400 Phaseolus vulgaris HOM05D002103 ORTHO05D007890 8.3e-21 105.1 205 37.1
TAR381G1315 Trochodendron aralioides HOM05D002103 ORTHO05D007890 8.3e-21 105.1 186 34.9
arahy.Tifrunner.gnm1.ann1.7RGS7A Arachis hypogaea HOM05D002103 ORTHO05D007890 1.1e-20 104.8 205 36.6
ClCG08G015720 Citrullus lanatus HOM05D002103 ORTHO05D007890 1.1e-20 104.8 181 36.5
Mapoly0103s0014 Marchantia polymorpha HOM05D002103 ORTHO05D007890 1.1e-20 104.8 202 34.7
Lalb_Chr23g0267731 Lupinus albus HOM05D002103 ORTHO05D007890 1.4e-20 104.4 196 36.2
Aqoxy1G04301 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 1.8e-20 104.0 198 34.3
Aqoxy7G04203 Aquilegia oxysepala HOM05D002103 ORTHO05D007890 1.8e-20 104.0 197 34.5
PSO339G5974 Papaver somniferum HOM05D002103 ORTHO05D007890 1.8e-20 104.0 195 34.9
VMungo1127G1488 Vigna mungo HOM05D002103 ORTHO05D007890 1.8e-20 104.0 202 34.7
PSO801G0348 Papaver somniferum HOM05D002103 ORTHO05D007890 2.4e-20 103.6 195 34.4
QL02p005396 Quercus lobata HOM05D002103 ORTHO05D007890 2.4e-20 103.6 181 34.8
Sed0021207 Sechium edule HOM05D002103 ORTHO05D007890 2.4e-20 103.6 181 37.0
Thecc.08G011000 Theobroma cacao HOM05D002103 ORTHO05D007890 2.4e-20 103.6 182 36.3
arahy.Tifrunner.gnm1.ann1.MW41KC Arachis hypogaea HOM05D002103 ORTHO05D007890 3.1e-20 103.2 183 37.7
Haze_17544 Corylus avellana HOM05D002103 ORTHO05D004020 3.1e-20 103.2 181 34.3
Haze_17553 Corylus avellana HOM05D002103 ORTHO05D004020 3.1e-20 103.2 181 34.3
MELO3C010884.2 Cucumis melo HOM05D002103 ORTHO05D007890 3.1e-20 103.2 184 35.9
THA.LOC104802577 Tarenaya hassleriana HOM05D002103 ORTHO05D007890 3.1e-20 103.2 189 33.3
CsaV3_2G028050 Cucumis sativus L. HOM05D002103 ORTHO05D007890 4.1e-20 102.8 181 35.9
CiPaw.16G045900 Carya illinoinensis HOM05D002103 ORTHO05D007890 5.4e-20 102.4 185 34.1
ATR0605G347 Amborella trichopoda HOM05D002103 ORTHO05D007890 7.0e-20 102.1 185 34.6
Dinv35973 Davidia involucrata HOM05D002103 ORTHO05D004020 7.0e-20 102.1 180 35.0
Glyma.11G102400 Glycine max HOM05D002103 ORTHO05D007890 9.1e-20 101.7 194 35.1
Gohir.A03G078312 Gossypium hirsutum HOM05D002103 ORTHO05D007890 9.1e-20 101.7 191 37.7
Os08g0474600 Oryza sativa ssp. japonica HOM05D002103 ORTHO05D007890 9.1e-20 101.7 199 34.2
Cfa018527 Carpinus fangiana HOM05D002103 ORTHO05D004020 1.2e-19 101.3 180 35.0
Lj4C53T13 Lonicera japonica HOM05D002103 ORTHO05D007890 1.6e-19 100.9 181 34.3
Sabra14G0022500 Salix brachista HOM05D002103 ORTHO05D007890 1.6e-19 100.9 187 34.2
TAR628G0377 Trochodendron aralioides HOM05D000369 ORTHO05D007890 1.6e-19 100.9 180 35.6
COL.COLO4_26477 Corchorus olitorius HOM05D002103 ORTHO05D007890 2.0e-19 100.5 182 36.8
Lsat_1_v5_gn_1_20241 Lactuca sativa HOM05D002103 ORTHO05D007890 2.0e-19 100.5 192 34.9
Lj3g0001779 Lotus japonicus HOM05D002103 ORTHO05D007890 2.0e-19 100.5 201 34.8
CSS0015524 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D007890 2.7e-19 100.1 182 35.2
PSO210G1636 Papaver somniferum HOM05D002103 ORTHO05D007890 2.7e-19 100.1 195 33.8
TWI56G0989 Tripterygium wilfordii HOM05D002103 ORTHO05D007890 2.7e-19 100.1 181 35.9
Manes.03G089400 Manihot esculenta HOM05D002103 ORTHO05D007890 3.5e-19 99.8 183 33.3
Sc02g0007040 Simmondsia chinensis HOM05D002103 ORTHO05D004020 3.5e-19 99.8 192 32.8
ECA247G1332 Erigeron canadensis HOM05D002103 ORTHO05D007890 5.9e-19 99.0 184 35.9
FAN15G2894 Fragaria x ananassa HOM05D002103 ORTHO05D004020 5.9e-19 99.0 181 33.7
Carub.0006s2870 Capsella rubella HOM05D002103 ORTHO05D007890 7.7e-19 98.6 182 34.6
Cpa.g.c24415.2 Carica papaya HOM05D002103 ORTHO05D007890 7.7e-19 98.6 188 33.0
Thhalv10029407m.g Eutrema salsugineum HOM05D002103 ORTHO05D007890 1.0e-18 98.2 181 34.8
Gorai.005G103400 Gossypium raimondii HOM05D002103 ORTHO05D007890 1.0e-18 98.2 190 35.8
A09p28810 Brassica napus HOM05D002103 ORTHO05D007890 1.3e-18 97.8 185 31.9
BraA09t38443Z Brassica rapa HOM05D002103 ORTHO05D007890 1.3e-18 97.8 185 31.9
FvH4_2g34630 Fragaria vesca HOM05D002103 ORTHO05D007890 1.3e-18 97.8 181 33.7
FAN27G2960 Fragaria x ananassa HOM05D002103 ORTHO05D007890 1.7e-18 97.4 181 34.3
HanXRQChr12g0375061 Helianthus annuus HOM05D002103 ORTHO05D007890 1.7e-18 97.4 186 34.9
Hma1.2p1_0982F.1_g243870 Hydrangea macrophylla HOM05D002103 ORTHO05D007890 1.7e-18 97.4 185 34.6
Lj3P736T14 Lonicera japonica HOM05D002103 ORTHO05D007890 1.7e-18 97.4 181 33.7
AL6G43940 Arabidopsis lyrata HOM05D002103 ORTHO05D007890 2.3e-18 97.1 181 34.8
CSS0029487 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D007890 2.3e-18 97.1 182 36.3
Atru.chr13.649 Acer truncatum HOM05D002103 ORTHO05D007890 3.8e-18 96.3 185 34.1
Cc10_g04330 Coffea canephora HOM05D002103 ORTHO05D007890 3.8e-18 96.3 190 31.1
Lj1g0021003 Lotus japonicus HOM05D002103 ORTHO05D007890 3.8e-18 96.3 214 32.7
AT4G10130 Arabidopsis thaliana HOM05D002103 ORTHO05D007890 5.0e-18 95.9 181 34.3
Eucgr.F00241 Eucalyptus grandis HOM05D002103 ORTHO05D007890 5.0e-18 95.9 181 32.0
RcHm_v2.0_Chr7g0208301 Rosa chinensis HOM05D002103 ORTHO05D007890 5.0e-18 95.9 181 33.1
TPR.G32346 Trifolium pratense HOM05D002103 ORTHO05D007890 6.6e-18 95.5 200 32.0
Psat5g230280 Pisum sativum HOM05D002103 ORTHO05D007890 8.6e-18 95.1 205 32.7
Aa31LG9G11870 Aethionema arabicum HOM05D002103 ORTHO05D007890 1.1e-17 94.7 181 33.7
EL10Ac3g05247 Beta vulgaris HOM05D002103 ORTHO05D007890 1.1e-17 94.7 181 34.8
HanXRQChr02g0037671 Helianthus annuus HOM05D002103 ORTHO05D007890 1.1e-17 94.7 182 34.6
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 1.5e-17 94.4 193 34.2
Duzib093G0968 Durio zibethinus HOM05D002103 ORTHO05D007890 1.5e-17 94.4 182 34.6
Gohir.D02G092000 Gossypium hirsutum HOM05D002103 ORTHO05D007890 1.5e-17 94.4 191 36.1
MSTRG.22267 Avicennia marina HOM05D002103 ORTHO05D007890 2.5e-17 93.6 181 34.3
Prupe.1G438600 Prunus persica HOM05D002103 ORTHO05D007890 2.5e-17 93.6 181 31.5
RcHm_v2.0_Chr6g0307451 Rosa chinensis HOM05D002103 ORTHO05D007890 2.5e-17 93.6 181 32.6
Zm00001eb315040 Zea mays HOM05D002103 ORTHO05D007890 2.5e-17 93.6 209 32.5
BcaC04g21020 Brassica carinata HOM05D002103 ORTHO05D007890 3.3e-17 93.2 180 32.8
C09p36600 Brassica napus HOM05D002103 ORTHO05D007890 3.3e-17 93.2 180 32.8
BolC9t56492H Brassica oleracea HOM05D002103 ORTHO05D007890 3.3e-17 93.2 180 32.8
Sc19g0008280 Simmondsia chinensis HOM05D002103 ORTHO05D007890 4.2e-17 92.8 184 31.5
Ca_14028_v3 Cicer arietinum L. HOM05D002103 ORTHO05D007890 5.5e-17 92.4 183 33.9
Dinv39329 Davidia involucrata HOM05D002103 ORTHO05D007890 5.5e-17 92.4 180 33.9
BcaB01g01453 Brassica carinata HOM05D002103 ORTHO05D007890 7.2e-17 92.0 181 32.6
FAN20G2285 Fragaria x ananassa HOM05D002103 ORTHO05D007890 7.2e-17 92.0 181 32.6
Migut.N02701 Erythranthe guttata HOM05D002103 ORTHO05D007890 9.5e-17 91.7 180 33.3
SHI08293 Sapria himalayana HOM05D002103 ORTHO05D007890 9.5e-17 91.7 187 29.4
MD15G1084800 Malus domestica HOM05D002103 ORTHO05D007890 1.6e-16 90.9 181 34.3
Medtr3g006810 Medicago truncatula HOM05D002103 ORTHO05D007890 2.1e-16 90.5 199 31.7
Sp6g07290 Schrenkiella parvula HOM05D002103 ORTHO05D007890 2.8e-16 90.1 182 33.0
SpUn0121_0020 Schrenkiella parvula HOM05D002103 ORTHO05D007890 2.8e-16 90.1 182 33.0
Medtr6g003930 Medicago truncatula HOM05D002103 ORTHO05D007890 4.7e-16 89.4 199 31.2
Oeu011560.1 Olea europaea HOM05D002103 ORTHO05D007890 6.1e-16 89.0 193 33.2
BcaB05g23918 Brassica carinata HOM05D002103 ORTHO05D007890 8.0e-16 88.6 186 33.3
SGA_v2.0_scaffold168G38534 Striga asiatica HOM05D002103 ORTHO05D007890 8.0e-16 88.6 195 33.8
SGA_v2.0_scaffold62G21581 Striga asiatica HOM05D002103 ORTHO05D007890 1.0e-15 88.2 197 32.0
Medtr4g074580 Medicago truncatula HOM05D002103 ORTHO05D007890 1.8e-15 87.4 179 32.4
Oeu011541.1 Olea europaea HOM05D002103 ORTHO05D007890 2.3e-15 87.0 189 32.8
Duzib116G0248 Durio zibethinus HOM05D002103 ORTHO05D007890 6.8e-15 85.5 85 51.8
Pp3c18_17490 Physcomitrium patens HOM05D002103 ORTHO05D007890 1.5e-14 84.3 191 31.9
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.0e-14 84.0 185 29.7
Sopen12g030780 Solanum pennellii HOM05D002103 ORTHO05D007890 2.6e-14 83.6 185 30.3
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.4e-14 83.2 185 30.3
SGA_v2.0_scaffold208G41999 Striga asiatica HOM05D002103 ORTHO05D007890 3.4e-14 83.2 182 32.4
FAN15G1587 Fragaria x ananassa HOM05D002103 ORTHO05D007890 5.7e-14 82.4 179 31.8
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.7e-14 82.4 185 30.3
PGSC0003DMG400015418 Solanum tuberosum HOM05D002103 ORTHO05D007890 5.7e-14 82.4 185 29.7
CANSAT11G1050 Cannabis sativa HOM05D002103 ORTHO05D007890 7.5e-14 82.0 186 32.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 7.5e-14 82.0 185 31.4
PGR083G1082 Punica granatum HOM05D002103 ORTHO05D007890 7.5e-14 82.0 181 30.9
PSO170G0070 Papaver somniferum HOM05D002103 ORTHO05D007890 1.3e-13 81.3 93 47.3
CAN.G1422.7 Capsicum annuum HOM05D002103 ORTHO05D007890 1.7e-13 80.9 185 29.2
Nitab4.5_0004376g0080 Nicotiana tabacum HOM05D002103 ORTHO05D007890 1.7e-13 80.9 180 29.4
MD08G1103500 Malus domestica HOM05D002103 ORTHO05D007890 4.9e-13 79.3 184 29.3
unitig_19.g30010 Utricularia gibba HOM05D002103 ORTHO05D007890 1.4e-12 77.8 196 30.1
unitig_8.g5018 Utricularia gibba HOM05D002103 ORTHO05D007890 1.4e-12 77.8 196 30.1
Actinidia22618 Actinidia chinensis HOM05D002103 ORTHO05D004020 4.1e-12 76.3 79 46.8
AagrBONN_evm.TU.Sc2ySwM_344.4853 Anthoceros agrestis HOM05D002103 ORTHO05D007890 4.1e-12 76.3 179 32.4
CBR_g3068 Chara braunii HOM05D002103 ORTHO05D007890 1.9e-09 67.4 252 24.2
Psat7g173600 Pisum sativum HOM05D002103 ORTHO05D007890 5.6e-09 65.9 83 41.0
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 6.8e-07 58.9 58 43.1
MCO13G142 Micromonas commoda HOM05D002103 ORTHO05D007890 4.4e-06 56.2 101 34.7


User provided reference genes

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