Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04951 Sequoiadendron giganteum HOM05D002058 ORTHO05D000014 2.5e-68 261.9 129 100.0
SEGI_35541 Sequoiadendron giganteum HOM05D004798 ORTHO05D005809 1.6e-14 83.2 45 80.0
SEGI_27926 Sequoiadendron giganteum HOM05D004798 ORTHO05D000014 8.0e-14 80.9 47 80.9
SEGI_18801 Sequoiadendron giganteum HOM05D000169 ORTHO05D003054 2.6e-12 75.9 46 78.3
SEGI_40130 Sequoiadendron giganteum HOM05D001811 ORTHO05D001738 1.3e-11 73.6 44 72.7
SEGI_04939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 6.4e-11 71.2 45 68.9
SEGI_09258 Sequoiadendron giganteum HOM05D004947 ORTHO05D006077 9.2e-10 67.4 44 68.2
SEGI_08564 Sequoiadendron giganteum HOM05D000324 ORTHO05D012641 3.9e-08 62.0 60 50.0
SEGI_27469 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.6e-08 61.2 57 47.4
SEGI_03566 Sequoiadendron giganteum HOM05D002058 ORTHO05D003758 1.1e-07 60.5 61 55.7
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 75 37.3
SEGI_27630 Sequoiadendron giganteum HOM05D005122 ORTHO05D006057 3.3e-07 58.9 61 47.5
SGA_v2.0_scaffold2G01295 Striga asiatica HOM05D002058 ORTHO05D003758 1.2e-06 57.0 56 48.2
MSTRG.2530 Avicennia marina HOM05D002058 ORTHO05D003758 1.6e-06 56.6 60 48.3
CSS0049201 Camellia sinensis var. sinensis HOM05D002058 ORTHO05D003758 1.6e-06 56.6 60 48.3
CDE04G1180 Ceratophyllum demersum HOM05D002058 ORTHO05D003758 1.6e-06 56.6 61 50.8
SEGI_37625 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.8e-06 55.8 45 51.1
Atru.chr7.2034_Atru.chr7.2035 Acer truncatum HOM05D002058 ORTHO05D003758 3.6e-06 55.5 60 43.3
Manes.13G076034 Manihot esculenta HOM05D002058 ORTHO05D003758 3.6e-06 55.5 56 50.0
PSO541G4291 Papaver somniferum HOM05D002058 ORTHO05D003758 3.6e-06 55.5 55 49.1
Duzib264G1213 Durio zibethinus HOM05D002058 ORTHO05D003758 4.7e-06 55.1 60 46.7
Manes.12G142800 Manihot esculenta HOM05D002058 ORTHO05D003758 4.7e-06 55.1 60 43.3
CiPaw.03G134200 Carya illinoinensis HOM05D002058 ORTHO05D003758 6.2e-06 54.7 60 46.7
SGA_v2.0_scaffold51G18754 Striga asiatica HOM05D002058 ORTHO05D003758 6.2e-06 54.7 49 55.1
ATR0582G150 Amborella trichopoda HOM05D002058 ORTHO05D009216 8.1e-06 54.3 55 45.5
Thecc.01G113000 Theobroma cacao HOM05D002058 ORTHO05D003758 8.1e-06 54.3 60 46.7


User provided reference genes

Program Settings