Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04946 Sequoiadendron giganteum HOM05D002335 ORTHO05D006692 4.5e-70 267.7 124 100.0
ATR0598G258 Amborella trichopoda HOM05D002335 ORTHO05D006692 2.0e-54 215.7 124 76.6
Mapoly0146s0032 Marchantia polymorpha HOM05D002335 ORTHO05D006692 2.3e-50 202.2 122 71.3
CDE05G1851 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 2.8e-48 195.3 120 70.8
HPP92_013380 Vanilla planifolia HOM05D002335 ORTHO05D006692 3.7e-48 194.9 122 68.9
MBI13_g42820_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 6.9e-47 190.7 118 66.9
PSO135G0567 Papaver somniferum HOM05D002335 ORTHO05D006692 2.0e-46 189.1 121 69.4
Zm00001eb081660 Zea mays HOM05D002335 ORTHO05D006692 2.6e-46 188.7 120 67.5
Nn6g35620 Nelumbo nucifera HOM05D002335 ORTHO05D006692 3.4e-46 188.3 122 65.6
Cfa002991 Carpinus fangiana HOM05D002335 ORTHO05D006692 4.5e-46 188.0 121 68.6
Haze_26010 Corylus avellana HOM05D002335 ORTHO05D006692 4.5e-46 188.0 121 68.6
MBI19_g11823_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 1.0e-45 186.8 119 67.2
MBI19_g37791_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 1.0e-45 186.8 119 67.2
GSVIVG01015085001 Vitis vinifera HOM05D002335 ORTHO05D006692 1.3e-45 186.4 122 68.0
TAR626G0579 Trochodendron aralioides HOM05D002335 ORTHO05D006692 2.2e-45 185.7 123 67.5
TWI34G0950 Tripterygium wilfordii HOM05D002335 ORTHO05D006692 3.8e-45 184.9 123 67.5
TPR.G12576 Trifolium pratense HOM05D002335 ORTHO05D006692 6.5e-45 184.1 121 66.1
Hma1.2p1_0169F.1_g074550 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 8.5e-45 183.7 122 68.0
Hma1.2p1_0169F.1_g074601 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 8.5e-45 183.7 122 68.0
Psat4g017640 Pisum sativum HOM05D002335 ORTHO05D006692 1.1e-44 183.3 121 66.1
CiPaw.04G143300 Carya illinoinensis HOM05D002335 ORTHO05D006692 1.4e-44 183.0 121 66.9
Lj4g0006964 Lotus japonicus HOM05D002335 ORTHO05D006692 1.4e-44 183.0 121 66.1
Potri.018G065800 Populus trichocarpa HOM05D002335 ORTHO05D006692 1.4e-44 183.0 123 65.9
CSS0035766 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 1.9e-44 182.6 122 67.2
CSS0046237 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 1.9e-44 182.6 122 67.2
Phvul.003G130900 Phaseolus vulgaris HOM05D002335 ORTHO05D006692 2.5e-44 182.2 121 66.9
Glyma.17G049400 Glycine max HOM05D002335 ORTHO05D006692 3.2e-44 181.8 120 67.5
ClCG03G015100 Citrullus lanatus HOM05D002335 ORTHO05D006692 4.2e-44 181.4 121 63.6
MELO3C015519.2 Cucumis melo HOM05D002335 ORTHO05D006692 4.2e-44 181.4 121 63.6
Glyma.13G110300 Glycine max HOM05D002335 ORTHO05D006692 4.2e-44 181.4 120 67.5
CsaV3_1G041010 Cucumis sativus L. HOM05D002335 ORTHO05D006692 5.5e-44 181.0 120 64.2
Sc18g0002530 Simmondsia chinensis HOM05D002335 ORTHO05D006692 1.2e-43 179.9 121 64.5
Ciclev10009634m.g Citrus clementina HOM05D002335 ORTHO05D006692 2.1e-43 179.1 123 64.2
Potri.006G142000 Populus trichocarpa HOM05D002335 ORTHO05D006692 2.1e-43 179.1 120 65.0
Actinidia29931 Actinidia chinensis HOM05D002335 ORTHO05D006692 2.7e-43 178.7 121 66.9
Manes.03G040300 Manihot esculenta HOM05D002335 ORTHO05D006692 6.1e-43 177.6 123 62.6
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 7.9e-43 177.2 120 65.8
QL11p000707 Quercus lobata HOM05D002335 ORTHO05D006692 7.9e-43 177.2 121 62.8
Sed0014235 Sechium edule HOM05D002335 ORTHO05D006692 7.9e-43 177.2 121 62.0
Sed0016579 Sechium edule HOM05D002335 ORTHO05D006692 7.9e-43 177.2 121 62.8
VMungo1215G3327 Vigna mungo HOM05D002335 ORTHO05D006692 7.9e-43 177.2 124 65.3
AagrBONN_evm.TU.Sc2ySwM_368.225 Anthoceros agrestis HOM05D002335 ORTHO05D006692 1.4e-42 176.4 122 60.7
Medtr4g125360 Medicago truncatula HOM05D002335 ORTHO05D006692 1.8e-42 176.0 121 62.0
SalBow5G0979 Salvia bowleyana HOM05D002335 ORTHO05D006692 2.3e-42 175.6 119 66.4
SalBow5G2105 Salvia bowleyana HOM05D002335 ORTHO05D006692 2.3e-42 175.6 119 66.4
ECA240G4665 Erigeron canadensis HOM05D002335 ORTHO05D006692 3.0e-42 175.3 121 64.5
Peaxi162Scf00127g00206 Petunia axillaris HOM05D002335 ORTHO05D006692 5.1e-42 174.5 119 63.0
SMO361G0221 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 6.7e-42 174.1 120 62.5
SMO361G0519 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 6.7e-42 174.1 120 62.5
Aa31sc133G40 Aethionema arabicum HOM05D002335 ORTHO05D006692 8.8e-42 173.7 121 61.2
Lalb_Chr12g0200131 Lupinus albus HOM05D002335 ORTHO05D006692 8.8e-42 173.7 120 64.2
CDE11G0744 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 1.1e-41 173.3 143 57.3
Migut.L01564 Erythranthe guttata HOM05D002335 ORTHO05D006692 1.1e-41 173.3 119 63.9
Sp3g24590 Schrenkiella parvula HOM05D002335 ORTHO05D006692 2.0e-41 172.6 121 61.2
BcaB06g26882 Brassica carinata HOM05D002335 ORTHO05D006692 2.5e-41 172.2 121 61.2
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.5e-41 172.2 121 61.2
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 2.5e-41 172.2 121 61.2
BcaC06g35951 Brassica carinata HOM05D002335 ORTHO05D006692 4.3e-41 171.4 121 61.2
Carub.0003s2714 Capsella rubella HOM05D002335 ORTHO05D006692 4.3e-41 171.4 121 60.3
Dinv25560 Davidia involucrata HOM05D002335 ORTHO05D006692 4.3e-41 171.4 119 64.7
AT2G06010 Arabidopsis thaliana HOM05D002335 ORTHO05D006692 5.7e-41 171.0 121 60.3
Thhalv10008863m.g Eutrema salsugineum HOM05D002335 ORTHO05D006692 5.7e-41 171.0 121 60.3
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 7.4e-41 170.6 121 60.3
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 7.4e-41 170.6 121 60.3
Prupe.7G199200 Prunus persica HOM05D002335 ORTHO05D006692 7.4e-41 170.6 119 63.9
MSTRG.10511 Avicennia marina HOM05D002335 ORTHO05D006692 9.7e-41 170.2 120 61.7
Hund26036 Selenicereus undatus HOM05D002335 ORTHO05D006692 9.7e-41 170.2 120 63.3
Sopen12g004030 Solanum pennellii HOM05D002335 ORTHO05D006692 9.7e-41 170.2 119 63.0
CARHR103670 Cardamine hirsuta HOM05D002335 ORTHO05D006692 1.3e-40 169.9 121 58.7
Oeu049119.1 Olea europaea HOM05D002335 ORTHO05D006692 1.3e-40 169.9 119 62.2
RcHm_v2.0_Chr2g0094901 Rosa chinensis HOM05D002335 ORTHO05D006692 1.7e-40 169.5 120 60.8
Solyc07g041780.3 Solanum lycopersicum HOM05D002335 ORTHO05D006692 1.7e-40 169.5 119 63.9
Sopen07g021270 Solanum pennellii HOM05D002335 ORTHO05D006692 1.7e-40 169.5 119 63.9
MD02G1091100 Malus domestica HOM05D002335 ORTHO05D006692 2.2e-40 169.1 120 62.5
AL3G43590 Arabidopsis lyrata HOM05D002335 ORTHO05D006692 2.8e-40 168.7 121 59.5
PGR044G0908 Punica granatum HOM05D002335 ORTHO05D006692 2.8e-40 168.7 121 58.7
HanXRQChr03g0060151 Helianthus annuus HOM05D002335 ORTHO05D006692 3.7e-40 168.3 120 62.5
Aqoxy7G04078 Aquilegia oxysepala HOM05D002335 ORTHO05D006692 4.8e-40 167.9 118 60.2
AUR62025248 Chenopodium quinoa HOM05D002335 ORTHO05D006692 4.8e-40 167.9 119 64.7
AUR62028936 Chenopodium quinoa HOM05D002335 ORTHO05D006692 4.8e-40 167.9 119 64.7
PGSC0003DMG400013000 Solanum tuberosum HOM05D002335 ORTHO05D006692 4.8e-40 167.9 119 63.0
Gohir.A06G076400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 8.2e-40 167.2 119 61.3
Gorai.010G088300 Gossypium raimondii HOM05D002335 ORTHO05D006692 8.2e-40 167.2 119 61.3
COL.COLO4_18100 Corchorus olitorius HOM05D002335 ORTHO05D006692 1.4e-39 166.4 136 57.4
MD15G1217300 Malus domestica HOM05D002335 ORTHO05D006692 2.4e-39 165.6 120 60.8
SGA_v2.0_scaffold308G48074 Striga asiatica HOM05D002335 ORTHO05D006692 2.4e-39 165.6 118 62.7
THA.LOC104826590 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 3.1e-39 165.2 119 59.7
Eucgr.C03511 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.1e-39 164.9 120 59.2
FvH4_1g08630 Fragaria vesca HOM05D002335 ORTHO05D006692 4.1e-39 164.9 120 60.0
Eucgr.C03267 Eucalyptus grandis HOM05D002335 ORTHO05D006692 5.3e-39 164.5 120 59.2
CANSAT56G4475 Cannabis sativa HOM05D002335 ORTHO05D006692 6.9e-39 164.1 113 61.9
Eucgr.C03501 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.2e-38 163.3 120 59.2
FAN23G0492 Fragaria x ananassa HOM05D002335 ORTHO05D006692 2.6e-38 162.2 120 59.2
FAN28G2258 Fragaria x ananassa HOM05D002335 ORTHO05D006692 2.6e-38 162.2 120 59.2
Eucgr.C03340 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.4e-38 161.8 120 58.3
Eucgr.C03348 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.4e-38 161.8 120 58.3
Eucgr.H02780 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.4e-38 161.8 120 56.7
Eucgr.C03331 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.5e-38 161.4 120 58.3
EL10Ac8g19062 Beta vulgaris HOM05D002335 ORTHO05D006692 5.9e-38 161.0 119 59.7
Cpa.g.sc28.42 Carica papaya HOM05D002335 ORTHO05D006692 7.7e-38 160.6 139 54.7
PGR044G2482 Punica granatum HOM05D002335 ORTHO05D006692 1.3e-37 159.8 121 57.0
PGSC0003DMG400000324 Solanum tuberosum HOM05D002335 ORTHO05D006692 1.3e-37 159.8 139 54.7
THA.LOC104815332 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 1.3e-37 159.8 122 59.0
DCAR_024750 Daucus carota HOM05D002335 ORTHO05D006692 1.7e-37 159.5 121 57.9
DCAR_031919 Daucus carota HOM05D002335 ORTHO05D006692 1.7e-37 159.5 121 57.9
Eucgr.C03278 Eucalyptus grandis HOM05D002335 ORTHO05D006692 6.5e-37 157.5 118 58.5
AagrBONN_evm.TU.Sc2ySwM_368.521 Anthoceros agrestis HOM05D002335 ORTHO05D006692 3.2e-36 155.2 122 52.5
vmacro17199 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 5.5e-36 154.5 151 49.7
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 2.7e-35 152.1 106 64.2
vmacro06340 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 2.7e-35 152.1 136 52.2
FAN19G2961 Fragaria x ananassa HOM05D002335 ORTHO05D006692 6.1e-35 151.0 141 50.4
Rhsim05G0007700 Rhododendron simsii HOM05D002335 ORTHO05D006692 5.1e-34 147.9 104 60.6
Rhsim03G0227700 Rhododendron simsii HOM05D002335 ORTHO05D006692 6.7e-34 147.5 166 44.6
Pp3c2_1630 Physcomitrium patens HOM05D002335 ORTHO05D006692 1.1e-33 146.7 117 53.0
FAN26G1566 Fragaria x ananassa HOM05D002335 ORTHO05D006692 5.7e-33 144.4 162 44.4
FAN26G0120 Fragaria x ananassa HOM05D002335 ORTHO05D006692 7.4e-33 144.1 162 43.8
Sabra06G0111100 Salix brachista HOM05D002335 ORTHO05D006692 5.3e-31 137.9 93 61.3
Ca_21321_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006692 9.1e-31 137.1 93 61.3
Nitab4.5_0002966g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006692 9.1e-31 137.1 91 65.9
Cc06_g12140 Coffea canephora HOM05D002335 ORTHO05D006692 1.2e-30 136.7 92 64.1
Pp3c14_25980 Physcomitrium patens HOM05D002335 ORTHO05D006692 1.2e-30 136.7 116 45.7
unitig_8.g3530 Utricularia gibba HOM05D002335 ORTHO05D006692 1.2e-30 136.7 119 48.7
Thecc.09G077400 Theobroma cacao HOM05D002335 ORTHO05D006692 2.0e-30 136.0 95 62.1
arahy.Tifrunner.gnm1.ann1.U5UTMI Arachis hypogaea HOM05D002335 ORTHO05D006692 2.9e-29 132.1 124 54.0
Nitab4.5_0000073g0180 Nicotiana tabacum HOM05D002335 ORTHO05D006692 2.9e-29 132.1 88 62.5
arahy.Tifrunner.gnm1.ann1.0T42SY Arachis hypogaea HOM05D002335 ORTHO05D006692 5.0e-29 131.3 120 53.3
CAN.G1963.2 Capsicum annuum HOM05D002335 ORTHO05D006692 6.5e-29 131.0 93 59.1
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 1.5e-28 129.8 111 52.3
Solyc12g009080.2 Solanum lycopersicum HOM05D002335 ORTHO05D006692 1.5e-28 129.8 91 60.4
Gohir.D06G075400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 2.1e-27 125.9 91 59.3
Lj7A687T54 Lonicera japonica HOM05D002335 ORTHO05D006692 8.0e-27 124.0 99 58.6
Eucgr.C03281 Eucalyptus grandis HOM05D002335 ORTHO05D006692 8.8e-26 120.6 88 59.1
Peaxi162Scf00928g00035 Petunia axillaris HOM05D002335 ORTHO05D006692 1.5e-25 119.8 120 47.5
Ah.09g231610 Amaranthus hybridus HOM05D002335 ORTHO05D006692 3.3e-25 118.6 113 50.4
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 5.7e-25 117.9 135 43.7
HPP92_013382 Vanilla planifolia HOM05D002335 ORTHO05D006692 1.3e-24 116.7 72 65.3
unitig_899.g15177 Utricularia gibba HOM05D002335 ORTHO05D006692 4.1e-23 111.7 117 43.6
CBR_g38469 Chara braunii HOM05D002335 ORTHO05D006692 4.5e-22 108.2 91 47.3
Eucgr.C03513 Eucalyptus grandis HOM05D002335 ORTHO05D006692 4.5e-22 108.2 105 51.4
Eucgr.L03294 Eucalyptus grandis HOM05D002335 ORTHO05D006692 2.0e-17 92.8 120 40.0
Nitab4.5_0011754g0020 Nicotiana tabacum HOM05D002335 ORTHO05D006692 4.5e-14 81.6 126 41.3


User provided reference genes

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