Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 9.2e-68 260.0 123 100.0
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.4e-52 209.5 116 83.6
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.4e-52 209.5 116 83.6
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 9.3e-52 206.8 119 79.0
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 2.7e-51 205.3 116 81.9
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 4.6e-51 204.5 116 80.2
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 7.8e-51 203.8 116 79.3
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.0e-50 203.4 116 81.9
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 1.3e-50 203.0 116 80.2
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 1.7e-50 202.6 116 81.0
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.9e-50 201.4 116 79.3
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 6.6e-50 200.7 116 79.3
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 8.7e-50 200.3 114 81.6
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 1.1e-49 199.9 116 81.0
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 1.5e-49 199.5 116 79.3
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.9e-49 199.1 116 81.0
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 2.5e-49 198.7 116 80.2
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 3.3e-49 198.4 116 80.2
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 4.3e-49 198.0 116 77.6
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 4.3e-49 198.0 116 79.3
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 4.3e-49 198.0 113 79.6
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 4.3e-49 198.0 116 80.2
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 5.6e-49 197.6 113 80.5
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 5.6e-49 197.6 116 77.6
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 5.6e-49 197.6 114 80.7
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 9.6e-49 196.8 116 75.9
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 9.6e-49 196.8 116 79.3
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.3e-48 196.4 116 78.4
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.3e-48 196.4 116 77.6
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.3e-48 196.4 116 77.6
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 2.8e-48 195.3 116 76.7
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 2.8e-48 195.3 116 76.7
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.8e-48 195.3 116 76.7
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 3.6e-48 194.9 116 79.3
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 4.8e-48 194.5 117 76.1
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 4.8e-48 194.5 116 77.6
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 4.8e-48 194.5 116 75.0
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 6.2e-48 194.1 116 76.7
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 6.2e-48 194.1 116 75.9
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 6.2e-48 194.1 119 77.3
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 6.2e-48 194.1 119 77.3
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 6.2e-48 194.1 116 76.7
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.1e-47 193.4 113 79.6
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 3.1e-47 191.8 116 78.4
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 4.0e-47 191.4 116 76.7
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 5.3e-47 191.0 123 74.0
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 6.9e-47 190.7 116 74.1
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.2e-46 189.9 114 77.2
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 77.6
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 4.5e-46 188.0 121 73.6
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 4.5e-46 188.0 116 75.9
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 1.3e-45 186.4 114 78.1
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 2.9e-45 185.3 116 75.0
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 3.8e-45 184.9 114 75.4
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 3.8e-45 184.9 117 74.4
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 4.9e-45 184.5 114 75.4
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 4.9e-45 184.5 114 75.4
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 4.9e-45 184.5 114 75.4
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 4.9e-45 184.5 114 75.4
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 4.9e-45 184.5 121 71.1
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 6.4e-45 184.1 114 75.4
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 8.4e-45 183.7 118 75.4
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 8.4e-45 183.7 118 75.4
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 8.4e-45 183.7 118 75.4
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 8.4e-45 183.7 118 75.4
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.1e-44 183.3 114 74.6
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.1e-44 183.3 114 74.6
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 1.1e-44 183.3 119 72.3
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 3.2e-44 181.8 118 74.6
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 4.2e-44 181.4 130 67.7
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 4.2e-44 181.4 118 74.6
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 5.4e-44 181.0 114 73.7
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 5.4e-44 181.0 114 73.7
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 5.4e-44 181.0 114 72.8
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 7.1e-44 180.6 114 72.8
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-43 179.9 114 72.8
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-43 179.9 114 72.8
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 1.2e-43 179.9 114 72.8
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 1.6e-43 179.5 114 73.7
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 1.6e-43 179.5 114 73.7
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 1.0e-42 176.8 114 72.8
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 3.0e-42 175.3 113 72.6
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 2.1e-40 169.1 117 65.0
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.7e-37 159.5 130 63.1
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 6.4e-37 157.5 97 75.3
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 6.4e-37 157.5 87 81.6
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.4e-36 156.4 111 67.6
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 5.5e-36 154.5 87 79.3
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 7.1e-36 154.1 87 78.2
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.6e-35 152.9 115 61.7
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.6e-35 152.9 87 79.3
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 3.5e-35 151.8 84 79.8
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 4.6e-35 151.4 88 78.4
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 1.0e-34 150.2 84 79.8
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.8e-34 149.4 77 85.7
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 3.9e-34 148.3 85 76.5
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 3.9e-34 148.3 85 76.5
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 1.5e-33 146.4 84 79.8
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.5e-33 146.4 86 75.6
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.9e-33 146.0 83 78.3
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 1.9e-33 146.0 84 79.8
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 6.2e-32 141.0 86 73.3
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 6.2e-32 141.0 72 86.1
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.4e-31 139.8 70 90.0
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 5.3e-31 137.9 84 76.2
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 5.3e-31 137.9 79 78.5
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 6.9e-31 137.5 114 60.5
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 6.9e-31 137.5 114 60.5
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 1.2e-30 136.7 86 70.9
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.2e-30 136.7 98 66.3
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 2.2e-29 132.5 72 81.9
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.1e-28 130.2 101 60.4
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 2.5e-28 129.0 100 62.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 7.1e-28 127.5 80 73.8
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 6.0e-27 124.4 96 63.5
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 7.2e-20 100.9 65 69.2
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 7.9e-19 97.4 56 78.6
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 4.3e-17 91.7 127 39.4
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 4.1e-15 85.1 120 39.2
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 3.8e-13 78.6 113 42.5
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 2.5e-12 75.9 118 36.4
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 5.5e-12 74.7 146 34.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 9.7e-09 63.9 30 86.7
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 3.7e-08 62.0 30 93.3
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 2.4e-07 59.3 30 86.7


User provided reference genes

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