Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04913 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 3.6e-200 701.4 365 100.0
MD05G1358600 Malus domestica HOM05D004898 ORTHO05D005574 1.9e-137 493.0 324 74.7
FAN21G2703 Fragaria x ananassa HOM05D004898 ORTHO05D005574 9.5e-137 490.7 325 73.5
Prupe.4G009500 Prunus persica HOM05D004898 ORTHO05D005574 1.2e-136 490.3 325 73.8
FvH4_3g00891 Fragaria vesca HOM05D004898 ORTHO05D005574 2.8e-136 489.2 325 73.8
Sabra06G0009800 Salix brachista HOM05D004898 ORTHO05D005574 4.7e-136 488.4 321 74.5
Eucgr.E03924 Eucalyptus grandis HOM05D004898 ORTHO05D005574 1.8e-135 486.5 325 73.5
Potri.006G013900 Populus trichocarpa HOM05D004898 ORTHO05D005574 6.8e-135 484.6 325 73.5
Dinv07411 Davidia involucrata HOM05D004898 ORTHO05D005574 5.8e-134 481.5 321 73.5
RcHm_v2.0_Chr5g0001371 Rosa chinensis HOM05D004898 ORTHO05D005574 5.8e-134 481.5 326 73.0
Rhsim13G0144800 Rhododendron simsii HOM05D004898 ORTHO05D005574 2.9e-133 479.2 325 71.7
Manes.08G069675 Manihot esculenta HOM05D004898 ORTHO05D005574 1.1e-132 477.2 325 72.3
Actinidia39792 Actinidia chinensis HOM05D004898 ORTHO05D005574 2.4e-132 476.1 326 72.1
Cc09_g00800 Coffea canephora HOM05D004898 ORTHO05D005574 2.4e-132 476.1 329 69.9
Oeu052872.1 Olea europaea HOM05D004898 ORTHO05D005574 2.4e-132 476.1 325 72.0
GSVIVG01003326001 Vitis vinifera HOM05D004898 ORTHO05D005574 5.4e-132 474.9 321 72.9
GSVIVG01006080001 Vitis vinifera HOM05D004898 ORTHO05D005574 5.4e-132 474.9 321 72.9
QL05p069311 Quercus lobata HOM05D004898 ORTHO05D005574 7.1e-132 474.6 326 72.1
BcaC03g16972 Brassica carinata HOM05D004898 ORTHO05D005574 1.2e-131 473.8 336 69.6
C02p48760 Brassica napus HOM05D004898 ORTHO05D005574 1.2e-131 473.8 336 69.6
BolC2t10970H Brassica oleracea HOM05D004898 ORTHO05D005574 1.2e-131 473.8 336 69.6
A02p31430 Brassica napus HOM05D004898 ORTHO05D005574 2.1e-131 473.0 336 69.9
Ciclev10014770m.g Citrus clementina HOM05D004898 ORTHO05D005574 2.1e-131 473.0 343 69.1
MBI19_g06154_MAGBIO Magnolia biondii HOM05D004898 ORTHO05D005574 2.7e-131 472.6 329 70.5
vmacro03635 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 2.7e-131 472.6 325 70.8
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum HOM05D004898 ORTHO05D005574 4.6e-131 471.9 325 72.3
TWI38G1092 Tripterygium wilfordii HOM05D004898 ORTHO05D005574 4.6e-131 471.9 321 71.3
CAN.G1186.45 Capsicum annuum HOM05D004898 ORTHO05D005574 7.8e-131 471.1 329 69.9
Sopen11g007110 Solanum pennellii HOM05D004898 ORTHO05D005574 1.7e-130 469.9 340 69.1
EL10Ac8g20211 Beta vulgaris HOM05D004898 ORTHO05D005574 3.0e-130 469.2 326 69.6
Cfa000089 Carpinus fangiana HOM05D004898 ORTHO05D005574 3.9e-130 468.8 326 70.9
MD10G1333000 Malus domestica HOM05D004898 ORTHO05D005574 5.1e-130 468.4 326 70.6
PGSC0003DMG400013282 Solanum tuberosum HOM05D004898 ORTHO05D005574 8.6e-130 467.6 339 69.3
Aqoxy4G02191 Aquilegia oxysepala HOM05D004898 ORTHO05D005574 1.9e-129 466.5 325 71.4
RcHm_v2.0_Chr5g0001361 Rosa chinensis HOM05D004898 ORTHO05D005574 2.5e-129 466.1 326 70.2
HPP92_022800 Vanilla planifolia HOM05D004898 ORTHO05D005574 5.6e-129 464.9 332 68.7
Nn1g03284 Nelumbo nucifera HOM05D004898 ORTHO05D005574 9.6e-129 464.2 318 72.6
CARHR173790 Cardamine hirsuta HOM05D004898 ORTHO05D005574 3.6e-128 462.2 331 68.3
Prupe.4G009400 Prunus persica HOM05D004898 ORTHO05D005574 3.6e-128 462.2 320 70.3
Solyc11g012360.2 Solanum lycopersicum HOM05D004898 ORTHO05D005574 3.6e-128 462.2 340 68.5
AL8G10410 Arabidopsis lyrata HOM05D004898 ORTHO05D005574 4.7e-128 461.8 331 68.0
FvH4_3g00890 Fragaria vesca HOM05D004898 ORTHO05D005574 6.2e-128 461.5 326 70.2
PSO541G1832 Papaver somniferum HOM05D004898 ORTHO05D005574 6.2e-128 461.5 325 70.5
Carub.0008s0022 Capsella rubella HOM05D004898 ORTHO05D005574 8.1e-128 461.1 331 68.9
A06p44970 Brassica napus HOM05D004898 ORTHO05D005574 1.1e-127 460.7 331 68.6
BraA02t08145Z Brassica rapa HOM05D004898 ORTHO05D005574 1.8e-127 459.9 333 68.8
CANSAT56G0760 Cannabis sativa HOM05D004898 ORTHO05D005574 1.8e-127 459.9 321 70.4
Thhalv10000848m.g Eutrema salsugineum HOM05D004898 ORTHO05D005574 1.8e-127 459.9 331 68.0
BolC7t43662H Brassica oleracea HOM05D004898 ORTHO05D005574 3.1e-127 459.1 331 68.3
PSO675G0622 Papaver somniferum HOM05D004898 ORTHO05D005574 3.1e-127 459.1 325 70.8
ECA240G2526 Erigeron canadensis HOM05D004898 ORTHO05D005574 5.2e-127 458.4 319 70.2
FAN21G0575 Fragaria x ananassa HOM05D004898 ORTHO05D005574 5.2e-127 458.4 326 69.6
BcaC06g31373 Brassica carinata HOM05D004898 ORTHO05D005574 6.8e-127 458.0 331 68.0
C07p31210 Brassica napus HOM05D004898 ORTHO05D005574 6.8e-127 458.0 334 67.7
A09p23110 Brassica napus HOM05D004898 ORTHO05D005574 1.2e-126 457.2 334 67.1
AT5G47560 Arabidopsis thaliana HOM05D004898 ORTHO05D005574 2.0e-126 456.4 330 67.6
BraA09t37914Z Brassica rapa HOM05D004898 ORTHO05D005574 2.0e-126 456.4 334 67.1
BcaC04g21615 Brassica carinata HOM05D004898 ORTHO05D005574 2.6e-126 456.1 334 67.1
C09p29850 Brassica napus HOM05D004898 ORTHO05D005574 2.6e-126 456.1 334 67.1
BolC9t55848H Brassica oleracea HOM05D004898 ORTHO05D005574 2.6e-126 456.1 334 67.1
Sp2g12290 Schrenkiella parvula HOM05D004898 ORTHO05D005574 2.6e-126 456.1 322 69.3
THA.LOC104806731 Tarenaya hassleriana HOM05D004898 ORTHO05D005574 3.4e-126 455.7 320 70.0
Migut.M01405 Erythranthe guttata HOM05D004898 ORTHO05D005574 4.4e-126 455.3 320 68.8
Aa31LG9G5480 Aethionema arabicum HOM05D004898 ORTHO05D005574 1.3e-125 453.8 315 70.5
Lsat_1_v5_gn_7_13740 Lactuca sativa HOM05D004898 ORTHO05D005574 1.3e-125 453.8 317 70.7
AUR62012806 Chenopodium quinoa HOM05D004898 ORTHO05D005574 2.2e-125 453.0 315 69.8
Cfa000090 Carpinus fangiana HOM05D004898 ORTHO05D005574 3.8e-125 452.2 316 69.9
MD10G1332900 Malus domestica HOM05D004898 ORTHO05D005574 4.9e-125 451.8 326 67.8
Hund23404 Selenicereus undatus HOM05D004898 ORTHO05D005574 4.9e-125 451.8 325 67.7
BraA06t27368Z Brassica rapa HOM05D004898 ORTHO05D005574 1.4e-124 450.3 335 66.6
Sc05g0009650 Simmondsia chinensis HOM05D004898 ORTHO05D005574 1.4e-124 450.3 326 69.3
Actinidia34018 Actinidia chinensis HOM05D004898 ORTHO05D005574 2.4e-124 449.5 332 68.7
SGA_v2.0_scaffold7G03752 Striga asiatica HOM05D004898 ORTHO05D005574 2.4e-124 449.5 315 69.5
Sed0020280 Sechium edule HOM05D004898 ORTHO05D005574 3.2e-124 449.1 326 67.5
CiPaw.09G103400 Carya illinoinensis HOM05D004898 ORTHO05D005574 4.2e-124 448.7 321 68.5
CSS0031856 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 7.1e-124 448.0 326 67.5
CSS0045138 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 7.1e-124 448.0 326 67.5
Peaxi162Scf00352g00047 Petunia axillaris HOM05D004898 ORTHO05D005574 7.1e-124 448.0 307 70.7
FAN25G1838 Fragaria x ananassa HOM05D004898 ORTHO05D005574 3.5e-123 445.7 315 70.5
ClCG01G010280 Citrullus lanatus HOM05D004898 ORTHO05D005574 7.8e-123 444.5 326 66.9
CsaV3_1G017190 Cucumis sativus L. HOM05D004898 ORTHO05D005574 7.8e-123 444.5 326 66.9
Thecc.06G234600 Theobroma cacao HOM05D004898 ORTHO05D005574 1.0e-122 444.1 322 68.6
MELO3C025563.2 Cucumis melo HOM05D004898 ORTHO05D005574 8.7e-122 441.0 326 66.6
DCAR_030865 Daucus carota HOM05D004898 ORTHO05D005574 8.7e-122 441.0 316 69.0
HanXRQChr05g0129101 Helianthus annuus HOM05D004898 ORTHO05D005574 1.5e-121 440.3 316 67.7
BcaC06g34240 Brassica carinata HOM05D004898 ORTHO05D005574 1.9e-121 439.9 355 63.1
Lj1A1241T64 Lonicera japonica HOM05D004898 ORTHO05D005574 1.9e-121 439.9 320 69.7
Duzib160G0749 Durio zibethinus HOM05D004898 ORTHO05D005574 3.6e-120 435.6 326 66.3
Medtr4g133230 Medicago truncatula HOM05D004898 ORTHO05D005574 3.1e-119 432.6 334 64.7
Haze_06951 Corylus avellana HOM05D004898 ORTHO05D005574 4.0e-119 432.2 318 67.0
Gohir.D10G008600 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.3e-119 431.8 323 67.2
Ca_21041_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 1.5e-118 430.3 333 64.3
Psat4g004680 Pisum sativum HOM05D004898 ORTHO05D005574 1.5e-118 430.3 338 63.3
Phvul.006G142700 Phaseolus vulgaris HOM05D004898 ORTHO05D005574 2.0e-118 429.9 342 62.0
Glyma.09G010700 Glycine max HOM05D004898 ORTHO05D005574 4.4e-118 428.7 342 62.0
PGR042G1052 Punica granatum HOM05D004898 ORTHO05D005574 4.4e-118 428.7 325 66.2
Gohir.D06G160500 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.8e-118 428.3 321 65.4
Gohir.A10G008900 Gossypium hirsutum HOM05D004898 ORTHO05D005574 1.7e-117 426.8 323 66.9
Gohir.A06G153700 Gossypium hirsutum HOM05D004898 ORTHO05D005574 2.9e-117 426.0 321 65.1
Lalb_Chr18g0057021 Lupinus albus HOM05D004898 ORTHO05D005574 8.4e-117 424.5 322 64.3
unitig_748.g7600 Utricularia gibba HOM05D004898 ORTHO05D005574 1.9e-116 423.3 319 64.9
Glyma.15G115200 Glycine max HOM05D004898 ORTHO05D005574 2.4e-116 422.9 340 61.2
Gorai.010G187200 Gossypium raimondii HOM05D004898 ORTHO05D005574 7.1e-116 421.4 319 65.2
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 2.7e-115 419.5 327 63.6
VMungo0540G1349 Vigna mungo HOM05D004898 ORTHO05D005574 4.6e-115 418.7 340 60.9
Lj6g0016962 Lotus japonicus HOM05D004898 ORTHO05D005574 1.7e-114 416.8 334 62.0
Lj4g0027564 Lotus japonicus HOM05D004898 ORTHO05D005574 2.3e-114 416.4 334 62.3
Nitab4.5_0000143g0160 Nicotiana tabacum HOM05D004898 ORTHO05D005574 1.1e-113 414.1 301 68.4
Os09g0484900 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 1.1e-113 414.1 325 62.8
Medtr2g026030 Medicago truncatula HOM05D004898 ORTHO05D005574 1.5e-113 413.7 322 63.0
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea HOM05D004898 ORTHO05D005574 2.5e-113 412.9 337 61.1
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea HOM05D004898 ORTHO05D005574 3.3e-113 412.5 337 61.1
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea HOM05D004898 ORTHO05D005574 7.3e-113 411.4 324 63.0
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea HOM05D004898 ORTHO05D005574 1.6e-112 410.2 324 62.7
Psat1g175640 Pisum sativum HOM05D004898 ORTHO05D005574 2.4e-111 406.4 322 62.7
Gorai.011G009400 Gossypium raimondii HOM05D004898 ORTHO05D005574 9.0e-111 404.4 323 64.1
Os08g0503700 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 9.9e-110 401.0 320 61.9
Zm00001eb316570 Zea mays HOM05D004898 ORTHO05D005574 5.1e-106 388.7 325 58.8
COL.COLO4_31899 Corchorus olitorius HOM05D004898 ORTHO05D005574 1.1e-105 387.5 322 62.7
Zm00001eb158920 Zea mays HOM05D004898 ORTHO05D005574 1.5e-105 387.1 321 58.9
VMungo0540G0197 Vigna mungo HOM05D004898 ORTHO05D005574 2.1e-104 383.3 318 60.1
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis HOM05D004898 ORTHO05D005574 5.3e-95 352.1 348 51.7
SMO118G0209 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 2.6e-94 349.7 344 49.1
Ca_00729_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 3.8e-93 345.9 322 56.2
Eucgr.L01902 Eucalyptus grandis HOM05D004898 ORTHO05D005574 1.4e-92 344.0 226 74.8
SalBow8G1501 Salvia bowleyana HOM05D004898 ORTHO05D005574 4.8e-88 328.9 230 69.6
TPR.G30453 Trifolium pratense HOM05D004898 ORTHO05D005574 4.5e-86 322.4 322 52.8
SMO270G0136 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 1.0e-85 321.2 353 46.7
TPR.G30452 Trifolium pratense HOM05D004898 ORTHO05D005574 3.8e-85 319.3 248 63.3
Pp3c15_15560 Physcomitrium patens HOM05D004898 ORTHO05D005574 2.3e-82 310.1 370 44.9
Mapoly0082s0008 Marchantia polymorpha HOM05D004898 ORTHO05D005574 1.5e-81 307.4 345 42.9
Glyma.07G265900 Glycine max HOM05D004898 ORTHO05D005574 6.8e-58 228.8 179 63.7
BcaC06g31369 Brassica carinata HOM05D004898 ORTHO05D005574 8.3e-56 221.9 151 70.2
Glyma.09G010800 Glycine max HOM05D004898 ORTHO05D005574 4.0e-50 203.0 171 57.3
AUR62021848 Chenopodium quinoa HOM05D004898 ORTHO05D005574 6.8e-50 202.2 144 68.1
BcaC06g31368 Brassica carinata HOM05D004898 ORTHO05D005574 1.7e-45 187.6 138 67.4
Oeu026504.1 Olea europaea HOM05D004898 ORTHO05D005574 3.6e-27 126.7 148 46.6
CiPaw.02G047500 Carya illinoinensis HOM05D004898 ORTHO05D005574 6.2e-27 125.9 99 59.6
TPR.G39985 Trifolium pratense HOM05D004898 ORTHO05D005574 5.2e-18 96.3 97 52.6
TPR.G14633 Trifolium pratense HOM05D004898 ORTHO05D005574 2.9e-16 90.5 69 58.0
Nitab4.5_0003626g0040 Nicotiana tabacum HOM05D004898 ORTHO05D005574 1.1e-10 72.0 59 61.0
VMungo1383G2427 Vigna mungo HOM05D035140 ORTHO05D005574 1.4e-07 61.6 45 57.8
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 6.0e-06 56.2 48 56.2


User provided reference genes

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