Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04856 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 0.0e+00 1298.1 647 100.0
SEGI_21075 Sequoiadendron giganteum HOM05D006593 ORTHO05D008512 0.0e+00 1298.1 647 100.0
ATR0665G270 Amborella trichopoda HOM05D006593 ORTHO05D008512 5.5e-119 432.6 641 40.9
QL06p035616 Quercus lobata HOM05D006593 ORTHO05D008512 1.1e-114 418.3 653 39.2
PSO017G0451 Papaver somniferum HOM05D006593 ORTHO05D008512 2.4e-114 417.2 644 39.4
Dinv01622 Davidia involucrata HOM05D006593 ORTHO05D008512 6.9e-114 415.6 637 39.9
Haze_03860 Corylus avellana HOM05D006593 ORTHO05D008512 2.0e-113 414.1 639 39.7
PSO170G1479 Papaver somniferum HOM05D006593 ORTHO05D008512 2.9e-112 410.2 645 39.5
TAR628G0061 Trochodendron aralioides HOM05D006593 ORTHO05D008512 3.8e-112 409.8 643 40.0
Nn5g29896 Nelumbo nucifera HOM05D006593 ORTHO05D008512 5.5e-111 406.0 639 38.7
Manes.13G098700 Manihot esculenta HOM05D006593 ORTHO05D008512 7.1e-111 405.6 645 39.8
CiPaw.07G048200 Carya illinoinensis HOM05D006593 ORTHO05D008512 1.2e-110 404.8 649 38.2
Aqoxy5G01304_Aqoxy5G01305 Aquilegia oxysepala HOM05D006593 ORTHO05D008512 6.7e-109 399.1 641 37.6
Sed0000560 Sechium edule HOM05D006593 ORTHO05D008512 1.1e-108 398.3 644 39.1
Actinidia06518 Actinidia chinensis HOM05D006593 ORTHO05D008512 1.9e-108 397.5 641 38.7
AUR62017964 Chenopodium quinoa HOM05D006593 ORTHO05D008512 1.6e-107 394.4 644 38.4
FAN28G2735 Fragaria x ananassa HOM05D006593 ORTHO05D008512 1.4e-106 391.3 647 39.1
Potri.007G010600 Populus trichocarpa HOM05D006593 ORTHO05D008512 4.1e-106 389.8 664 39.9
PGR031G1437 Punica granatum HOM05D006593 ORTHO05D008512 9.0e-106 388.7 638 37.6
Rhsim10G0172300 Rhododendron simsii HOM05D006593 ORTHO05D008512 2.6e-105 387.1 642 38.5
FAN19G1905 Fragaria x ananassa HOM05D006593 ORTHO05D008512 5.9e-105 386.0 653 38.3
MD15G1313700 Malus domestica HOM05D006593 ORTHO05D008512 1.7e-104 384.4 643 37.5
CSS0021282 Camellia sinensis var. sinensis HOM05D006593 ORTHO05D008512 6.5e-104 382.5 640 36.7
AUR62003656 Chenopodium quinoa HOM05D006593 ORTHO05D008512 1.4e-103 381.3 644 37.7
TPR.G29973 Trifolium pratense HOM05D006593 ORTHO05D008512 1.9e-103 380.9 650 36.6
Zm00001eb257050 Zea mays HOM05D006593 ORTHO05D008512 2.5e-103 380.6 638 38.2
Sabra07G0008000 Salix brachista HOM05D006593 ORTHO05D008512 3.2e-103 380.2 655 37.9
Pp3c8_800 Physcomitrium patens HOM05D006593 ORTHO05D008512 7.2e-103 379.0 657 37.1
DCAR_014189 Daucus carota HOM05D006593 ORTHO05D008512 1.2e-102 378.3 605 38.5
Medtr5g032210 Medicago truncatula HOM05D006593 ORTHO05D008512 1.6e-102 377.9 655 35.0
EL10Ac6g15212 Beta vulgaris HOM05D006593 ORTHO05D008512 2.1e-102 377.5 645 37.8
Atru.chr3.1259 Acer truncatum HOM05D006593 ORTHO05D008512 7.9e-102 375.6 649 37.4
Os02g0781600 Oryza sativa ssp. japonica HOM05D006593 ORTHO05D008512 1.0e-101 375.2 639 38.2
RcHm_v2.0_Chr2g0111321 Rosa chinensis HOM05D006593 ORTHO05D008512 1.0e-101 375.2 644 37.9
TWI53G0534 Tripterygium wilfordii HOM05D006593 ORTHO05D008512 1.4e-101 374.8 643 37.9
Oeu012466.1 Olea europaea HOM05D006593 ORTHO05D008512 2.3e-101 374.0 648 38.1
CANSAT01G0713 Cannabis sativa HOM05D006593 ORTHO05D008512 1.1e-100 371.7 639 38.5
Solyc11g010550.2 Solanum lycopersicum HOM05D006593 ORTHO05D008512 2.0e-100 370.9 640 35.3
COL.COLO4_27348 Corchorus olitorius HOM05D006593 ORTHO05D008512 3.3e-100 370.2 640 36.2
Eucgr.I00552 Eucalyptus grandis HOM05D006593 ORTHO05D008512 3.3e-100 370.2 644 36.3
Glyma.01G023700 Glycine max HOM05D006593 ORTHO05D008512 3.3e-100 370.2 655 34.8
PGSC0003DMG400016138 Solanum tuberosum HOM05D006593 ORTHO05D008512 3.3e-100 370.2 640 35.3
Mapoly0005s0227 Marchantia polymorpha HOM05D006593 ORTHO05D008512 5.7e-100 369.4 664 37.8
Sopen11g005350 Solanum pennellii HOM05D006593 ORTHO05D008512 7.4e-100 369.0 640 35.2
Ah.02g123650 Amaranthus hybridus HOM05D006593 ORTHO05D008512 1.7e-99 367.9 640 36.7
Ciclev10003755m.g Citrus clementina HOM05D006593 ORTHO05D008512 1.7e-99 367.9 644 36.8
CsaV3_6G045050 Cucumis sativus L. HOM05D006593 ORTHO05D008512 1.7e-99 367.9 643 37.6
Lj2g0020402 Lotus japonicus HOM05D006593 ORTHO05D008512 6.3e-99 365.9 648 35.8
Gohir.D03G042700 Gossypium hirsutum HOM05D006593 ORTHO05D008512 2.4e-98 364.0 640 36.9
Cc07_g14190 Coffea canephora HOM05D006593 ORTHO05D008512 1.5e-97 361.3 637 35.9
arahy.Tifrunner.gnm1.ann1.67PG0W Arachis hypogaea HOM05D006593 ORTHO05D008512 2.0e-97 360.9 636 35.7
arahy.Tifrunner.gnm1.ann1.ZAKH7Z Arachis hypogaea HOM05D006593 ORTHO05D008512 2.0e-97 360.9 636 35.7
Gohir.A02G131300 Gossypium hirsutum HOM05D006593 ORTHO05D008512 5.0e-96 356.3 637 36.7
AL4G12066 Arabidopsis lyrata HOM05D006593 ORTHO05D008512 9.4e-95 352.1 641 36.3
Migut.K00792 Erythranthe guttata HOM05D006593 ORTHO05D008512 2.1e-94 350.9 639 36.6
Gorai.003G043400 Gossypium raimondii HOM05D006593 ORTHO05D008512 2.1e-94 350.9 637 36.3
Peaxi162Scf00778g00014 Petunia axillaris HOM05D006593 ORTHO05D008512 2.1e-94 350.9 662 34.6
Thecc.01G091500 Theobroma cacao HOM05D006593 ORTHO05D008512 2.1e-94 350.9 639 36.2
Duzib147G0804 Durio zibethinus HOM05D006593 ORTHO05D008512 2.7e-94 350.5 638 36.1
A09p57440 Brassica napus HOM05D006593 ORTHO05D008512 3.6e-94 350.1 652 36.3
BraA09t41136Z Brassica rapa HOM05D006593 ORTHO05D008512 3.6e-94 350.1 652 36.3
SalBow5G0109 Salvia bowleyana HOM05D006593 ORTHO05D008512 6.1e-94 349.4 668 35.0
BcaC07g41050 Brassica carinata HOM05D006593 ORTHO05D008512 2.3e-93 347.4 652 36.5
C08p40530 Brassica napus HOM05D006593 ORTHO05D008512 2.3e-93 347.4 652 36.5
Sp4g01570 Schrenkiella parvula HOM05D006593 ORTHO05D008512 3.0e-93 347.1 643 36.9
THA.LOC104824911 Tarenaya hassleriana HOM05D006593 ORTHO05D008512 3.9e-93 346.7 653 36.9
AT2G22530 Arabidopsis thaliana HOM05D006593 ORTHO05D008512 3.3e-92 343.6 643 35.8
Nitab4.5_0001468g0100 Nicotiana tabacum HOM05D006593 ORTHO05D008512 5.7e-92 342.8 640 34.7
BcaB08g35096 Brassica carinata HOM05D006593 ORTHO05D008512 1.3e-91 341.7 649 35.9
BolC8t51623H Brassica oleracea HOM05D006593 ORTHO05D008512 2.2e-91 340.9 649 36.7
Thhalv10000032m.g Eutrema salsugineum HOM05D006593 ORTHO05D008512 2.8e-91 340.5 658 36.3
Cpa.g.sc55.33 Carica papaya HOM05D006593 ORTHO05D008512 1.4e-90 338.2 653 37.2
Sc16g0000540 Simmondsia chinensis HOM05D006593 ORTHO05D004993 1.4e-90 338.2 640 34.8
Prupe.6G198700 Prunus persica HOM05D006593 ORTHO05D008512 4.1e-90 336.7 639 34.1
ECA246G1560 Erigeron canadensis HOM05D006593 ORTHO05D004993 3.5e-89 333.6 628 34.7
Nitab4.5_0004153g0020 Nicotiana tabacum HOM05D006593 ORTHO05D008512 5.9e-89 332.8 641 34.0
SGA_v2.0_scaffold45G17238 Striga asiatica HOM05D006593 ORTHO05D008512 1.0e-88 332.0 608 36.2
Lju188A1G72 Lonicera japonica HOM05D006593 ORTHO05D008512 5.0e-88 329.7 604 35.1
Carub.0004s0170 Capsella rubella HOM05D006593 ORTHO05D008512 9.4e-87 325.5 613 34.9
vmacro13002 Vaccinium macrocarpon HOM05D006593 ORTHO05D008512 1.4e-85 321.6 687 32.9
Psat2g085480 Pisum sativum HOM05D006593 ORTHO05D008512 4.8e-83 313.2 676 32.4
unitig_748.g8644 Utricularia gibba HOM05D006593 ORTHO05D008512 5.3e-82 309.7 598 35.8
Eucgr.I00472 Eucalyptus grandis HOM05D006593 ORTHO05D008512 1.2e-81 308.5 531 36.2
Hund16537 Selenicereus undatus HOM05D006593 ORTHO05D008512 7.7e-81 305.8 645 32.7
CAN.G1843.3 Capsicum annuum HOM05D006593 ORTHO05D008512 5.0e-80 303.1 585 33.7
HanXRQChr17g0550591 Helianthus annuus HOM05D006593 ORTHO05D008512 5.5e-79 299.7 602 34.7
FAN26G1425 Fragaria x ananassa HOM05D006593 ORTHO05D008512 6.1e-78 296.2 404 40.8
Cfa006891 Carpinus fangiana HOM05D006593 ORTHO05D008512 4.0e-77 293.5 507 36.5
Eucgr.I00548 Eucalyptus grandis HOM05D006593 ORTHO05D008512 1.5e-76 291.6 644 32.9
Lsat_1_v5_gn_3_61401 Lactuca sativa HOM05D006593 ORTHO05D008512 1.0e-72 278.9 638 32.3
FvH4_1g19740 Fragaria vesca HOM05D006593 ORTHO05D008512 2.5e-71 274.2 524 35.5
Phvul.002G147900 Phaseolus vulgaris HOM05D006593 ORTHO05D008512 3.5e-65 253.8 510 32.7
HPP92_005969 Vanilla planifolia HOM05D006593 ORTHO05D008512 1.5e-63 248.4 373 40.2
HPP92_005976 Vanilla planifolia HOM05D006593 ORTHO05D008512 1.5e-63 248.4 373 40.2
VMungo1215G1341 Vigna mungo HOM05D006593 ORTHO05D008512 2.4e-58 231.1 498 32.1
Lalb_Chr05g0216291 Lupinus albus HOM05D006593 ORTHO05D008512 8.9e-53 212.6 478 31.4
Ca_04534_v3 Cicer arietinum L. HOM05D006593 ORTHO05D008512 4.3e-47 193.7 265 44.9
MBI06_g07364_MAGBIO Magnolia biondii HOM05D006593 ORTHO05D008512 9.5e-39 166.0 172 52.3
CAN.G1724.3 Capsicum annuum HOM05D006593 ORTHO05D008512 3.6e-38 164.1 163 51.5
CARHR113720 Cardamine hirsuta HOM05D006593 ORTHO05D008512 5.2e-37 160.2 162 51.9
Lalb_Chr05g0216281 Lupinus albus HOM05D006593 ORTHO05D008512 5.8e-36 156.8 154 55.2
MELO3C007718.2 Cucumis melo HOM05D006593 ORTHO05D008512 7.8e-33 146.4 268 36.2
GSVIVG01006089001 Vitis vinifera HOM05D006593 ORTHO05D008512 4.4e-28 130.6 131 52.7
Psat0ss25160g0040 Pisum sativum HOM05D000068 ORTHO05D020743 1.6e-25 122.1 166 42.2
CBR_g48853 Chara braunii HOM05D006593 ORTHO05D008512 1.1e-23 115.9 198 37.9
CDE03G0370 Ceratophyllum demersum HOM05D006593 ORTHO05D008512 1.5e-20 105.5 183 37.2
GSVIVG01006734001 Vitis vinifera HOM05D006593 ORTHO05D008512 2.4e-18 98.2 73 63.0
Psat6g040440 Pisum sativum HOM05D000610 ORTHO05D004774 4.3e-07 60.8 162 28.4


User provided reference genes

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