Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04750 Sequoiadendron giganteum HOM05D003187 ORTHO05D003630 1.6e-115 419.5 212 100.0
CDE04G1847 Ceratophyllum demersum HOM05D003187 ORTHO05D003630 2.2e-53 213.0 124 79.8
ATR0026G045 Amborella trichopoda HOM05D003187 ORTHO05D003630 6.5e-53 211.5 122 79.5
Migut.F00885 Erythranthe guttata HOM05D003187 ORTHO05D003630 8.5e-53 211.1 133 75.9
Mapoly0031s0040 Marchantia polymorpha HOM05D003187 ORTHO05D003630 8.5e-53 211.1 122 81.1
Oeu027845.1 Olea europaea HOM05D003187 ORTHO05D003630 8.5e-53 211.1 133 74.4
Pp3c9_17690 Physcomitrium patens HOM05D003187 ORTHO05D003630 1.4e-52 210.3 136 75.7
DCAR_011784 Daucus carota HOM05D003187 ORTHO05D003630 2.5e-52 209.5 124 77.4
Cre13.g565450 Chlamydomonas reinhardtii HOM05D003187 ORTHO05D003630 7.2e-52 208.0 122 79.5
Nitab4.5_0000244g0020 Nicotiana tabacum HOM05D003187 ORTHO05D003630 7.2e-52 208.0 136 74.3
Peaxi162Scf00457g00110 Petunia axillaris HOM05D003187 ORTHO05D003630 7.2e-52 208.0 124 78.2
Aqoxy6G01396 Aquilegia oxysepala HOM05D003187 ORTHO05D003630 9.4e-52 207.6 135 71.9
Nitab4.5_0009672g0030 Nicotiana tabacum HOM05D003187 ORTHO05D003630 9.4e-52 207.6 136 74.3
Cc05_g02550 Coffea canephora HOM05D003187 ORTHO05D003630 1.6e-51 206.8 133 74.4
Nn2g12076 Nelumbo nucifera HOM05D003187 ORTHO05D003630 2.1e-51 206.5 124 76.6
Sed0019761 Sechium edule HOM05D003187 ORTHO05D003630 2.1e-51 206.5 133 75.9
QL08p062568 Quercus lobata HOM05D003187 ORTHO05D003630 2.7e-51 206.1 124 78.2
Nitab4.5_0008689g0020 Nicotiana tabacum HOM05D003187 ORTHO05D003630 3.6e-51 205.7 136 73.5
TPR.G8049 Trifolium pratense HOM05D003187 ORTHO05D003630 3.6e-51 205.7 136 74.3
arahy.Tifrunner.gnm1.ann1.0XII0R Arachis hypogaea HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
arahy.Tifrunner.gnm1.ann1.K3QQ9E Arachis hypogaea HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 78.2
CAN.G584.39 Capsicum annuum HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
Glyma.14G062500 Glycine max HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 76.6
Sabra10G0148900 Salix brachista HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
Solyc07g006530.3 Solanum lycopersicum HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
Sopen07g002610 Solanum pennellii HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
PGSC0003DMG400027451 Solanum tuberosum HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
SGA_v2.0_scaffold62G21340 Striga asiatica HOM05D003187 ORTHO05D003630 4.6e-51 205.3 124 77.4
arahy.Tifrunner.gnm1.ann1.GJ5BI6 Arachis hypogaea HOM05D003187 ORTHO05D003630 6.1e-51 204.9 124 77.4
arahy.Tifrunner.gnm1.ann1.P69V6G Arachis hypogaea HOM05D003187 ORTHO05D003630 6.1e-51 204.9 124 77.4
Glyma.02G254000 Glycine max HOM05D003187 ORTHO05D003630 6.1e-51 204.9 124 77.4
Dinv20950 Davidia involucrata HOM05D003187 ORTHO05D003630 7.9e-51 204.5 124 77.4
Dinv20993 Davidia involucrata HOM05D003187 ORTHO05D003630 7.9e-51 204.5 124 77.4
CiPaw.06G148700 Carya illinoinensis HOM05D003187 ORTHO05D003630 1.0e-50 204.1 121 79.3
HanXRQChr14g0459901 Helianthus annuus HOM05D003187 ORTHO05D003630 1.0e-50 204.1 124 75.8
Lalb_Chr10g0104991 Lupinus albus HOM05D003187 ORTHO05D003630 1.0e-50 204.1 124 76.6
Prupe.1G197600 Prunus persica HOM05D003187 ORTHO05D003630 1.0e-50 204.1 124 78.2
Prupe.7G059800 Prunus persica HOM05D003187 ORTHO05D003630 1.0e-50 204.1 124 78.2
vmacro10066 Vaccinium macrocarpon HOM05D003187 ORTHO05D003630 1.0e-50 204.1 136 72.8
Haze_17177 Corylus avellana HOM05D003187 ORTHO05D003630 1.4e-50 203.8 124 77.4
Lsat_1_v5_gn_7_58981 Lactuca sativa HOM05D003187 ORTHO05D003630 1.4e-50 203.8 124 75.0
Phvul.008G226900 Phaseolus vulgaris HOM05D003187 ORTHO05D003630 1.4e-50 203.8 124 76.6
RcHm_v2.0_Chr7g0194071 Rosa chinensis HOM05D003187 ORTHO05D003630 1.4e-50 203.8 136 75.0
Dinv34429 Davidia involucrata HOM05D003187 ORTHO05D003630 1.8e-50 203.4 124 76.6
HanXRQChr07g0202751 Helianthus annuus HOM05D003187 ORTHO05D003630 1.8e-50 203.4 124 75.0
Medtr7g092860 Medicago truncatula HOM05D003187 ORTHO05D003630 1.8e-50 203.4 136 72.8
Cc05_g02410 Coffea canephora HOM05D003187 ORTHO05D003630 2.3e-50 203.0 122 77.0
PSO384G1733 Papaver somniferum HOM05D003187 ORTHO05D003630 2.3e-50 203.0 136 72.1
CiPaw.05G043000 Carya illinoinensis HOM05D003187 ORTHO05D003630 3.0e-50 202.6 124 76.6
CBR_g16842 Chara braunii HOM05D003187 ORTHO05D003630 3.0e-50 202.6 122 75.4
MD04G1043000 Malus domestica HOM05D003187 ORTHO05D003630 3.0e-50 202.6 124 78.2
FAN04G2380 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.9e-50 202.2 136 73.5
FAN08G2825 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.9e-50 202.2 136 73.5
FAN13G0040 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.9e-50 202.2 136 73.5
FAN18G2229 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.9e-50 202.2 136 73.5
Potri.010G193400 Populus trichocarpa HOM05D003187 ORTHO05D003630 3.9e-50 202.2 124 75.0
SalBow1G1358 Salvia bowleyana HOM05D003187 ORTHO05D003630 3.9e-50 202.2 124 76.6
MELO3C025148.2 Cucumis melo HOM05D003187 ORTHO05D003630 5.1e-50 201.8 124 77.4
CsaV3_5G008870 Cucumis sativus L. HOM05D003187 ORTHO05D003630 5.1e-50 201.8 124 77.4
PSO339G2876 Papaver somniferum HOM05D003187 ORTHO05D003630 5.1e-50 201.8 136 71.3
CSS0009728 Camellia sinensis var. sinensis HOM05D003187 ORTHO05D003630 6.7e-50 201.4 129 76.0
CSS0010540 Camellia sinensis var. sinensis HOM05D003187 ORTHO05D003630 6.7e-50 201.4 129 76.0
Cc06_g17320 Coffea canephora HOM05D003187 ORTHO05D003630 6.7e-50 201.4 124 75.0
VMungo0647G1330 Vigna mungo HOM05D003187 ORTHO05D003630 6.7e-50 201.4 124 75.0
Lj8A73G45 Lonicera japonica HOM05D003187 ORTHO05D003630 8.8e-50 201.1 124 75.0
Medtr5g081750 Medicago truncatula HOM05D003187 ORTHO05D003630 8.8e-50 201.1 141 70.9
CANSAT80G0456 Cannabis sativa HOM05D003187 ORTHO05D003630 1.1e-49 200.7 125 76.0
CANSAT80G1383 Cannabis sativa HOM05D003187 ORTHO05D003630 1.1e-49 200.7 125 76.0
Manes.07G124700 Manihot esculenta HOM05D003187 ORTHO05D003630 1.1e-49 200.7 124 77.4
TAR369G0547 Trochodendron aralioides HOM05D003187 ORTHO05D003630 1.1e-49 200.7 124 76.6
EL10Ac7g17924 Beta vulgaris HOM05D003187 ORTHO05D003630 1.5e-49 200.3 123 76.4
Duzib114G0739 Durio zibethinus HOM05D003187 ORTHO05D003630 1.5e-49 200.3 124 77.4
Gohir.D04G066500 Gossypium hirsutum HOM05D003187 ORTHO05D003630 1.5e-49 200.3 124 77.4
LjContig00357g0016423 Lotus japonicus HOM05D003187 ORTHO05D003630 1.5e-49 200.3 124 74.2
MCO12G170 Micromonas commoda HOM05D003187 ORTHO05D003630 1.5e-49 200.3 134 67.2
Psat6g127920 Pisum sativum HOM05D003187 ORTHO05D003630 1.5e-49 200.3 124 75.8
Sc17g0002050 Simmondsia chinensis HOM05D003187 ORTHO05D003630 1.5e-49 200.3 124 75.8
Thecc.10G027100 Theobroma cacao HOM05D003187 ORTHO05D003630 1.5e-49 200.3 124 76.6
COL.COLO4_25670 Corchorus olitorius HOM05D003187 ORTHO05D003630 2.0e-49 199.9 124 77.4
Gorai.012G075300 Gossypium raimondii HOM05D003187 ORTHO05D003630 2.0e-49 199.9 125 77.6
Manes.10G018200 Manihot esculenta HOM05D003187 ORTHO05D003630 2.0e-49 199.9 122 77.9
Hund05583 Selenicereus undatus HOM05D003187 ORTHO05D003630 2.0e-49 199.9 124 75.0
Eucgr.G03026 Eucalyptus grandis HOM05D003187 ORTHO05D003630 3.3e-49 199.1 124 75.8
Gohir.A05G346100 Gossypium hirsutum HOM05D003187 ORTHO05D003630 3.3e-49 199.1 124 76.6
PRCOL_00002332 Prasinoderma coloniale HOM05D003187 ORTHO05D003630 3.3e-49 199.1 124 72.6
Hund18445 Selenicereus undatus HOM05D003187 ORTHO05D003630 4.3e-49 198.7 124 75.8
Cc00_g04440 Coffea canephora HOM05D003187 ORTHO05D003630 5.7e-49 198.4 133 72.2
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 5.7e-49 198.4 122 75.4
unitig_27.g25097 Utricularia gibba HOM05D003187 ORTHO05D003630 5.7e-49 198.4 137 70.1
MBI17_g24519_MAGBIO Magnolia biondii HOM05D003187 ORTHO05D003630 7.4e-49 198.0 124 74.2
Ciclev10031157m.g Citrus clementina HOM05D003187 ORTHO05D003630 9.7e-49 197.6 124 77.4
ECA238G3690 Erigeron canadensis HOM05D003187 ORTHO05D003630 9.7e-49 197.6 124 73.4
Glyma.10G247850 Glycine max HOM05D003187 ORTHO05D003630 9.7e-49 197.6 124 74.2
GSVIVG01016375001 Vitis vinifera HOM05D003187 ORTHO05D003630 9.7e-49 197.6 124 75.0
FAN10G0795 Fragaria x ananassa HOM05D003187 ORTHO05D003630 1.7e-48 196.8 171 59.6
Lsat_1_v5_gn_2_122660 Lactuca sativa HOM05D003187 ORTHO05D003630 1.7e-48 196.8 124 72.6
Peaxi162Scf00297g01023 Petunia axillaris HOM05D003187 ORTHO05D003630 1.7e-48 196.8 133 71.4
FAN18G0443 Fragaria x ananassa HOM05D003187 ORTHO05D003630 2.2e-48 196.4 136 72.1
vmacro14468 Vaccinium macrocarpon HOM05D003187 ORTHO05D003630 2.2e-48 196.4 151 65.6
Cpa.g.sc19.222 Carica papaya HOM05D003187 ORTHO05D003630 3.7e-48 195.7 124 73.4
FAN06G4812 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.7e-48 195.7 135 71.9
Atru.chr12.251 Acer truncatum HOM05D003187 ORTHO05D003630 4.8e-48 195.3 124 75.8
AL3G37850 Arabidopsis lyrata HOM05D003187 ORTHO05D003630 4.8e-48 195.3 124 76.6
BcaNung02707 Brassica carinata HOM05D003187 ORTHO05D003630 4.8e-48 195.3 124 76.6
C07p49720 Brassica napus HOM05D003187 ORTHO05D003630 4.8e-48 195.3 124 76.6
BolC7t45473H Brassica oleracea HOM05D003187 ORTHO05D003630 4.8e-48 195.3 124 76.6
AT1G36280 Arabidopsis thaliana HOM05D003187 ORTHO05D003630 6.3e-48 194.9 124 75.8
THA.LOC104806141 Tarenaya hassleriana HOM05D003187 ORTHO05D003630 6.3e-48 194.9 124 75.8
BcaC01g00541 Brassica carinata HOM05D003187 ORTHO05D003630 8.2e-48 194.5 122 77.0
BolC3t20388H Brassica oleracea HOM05D003187 ORTHO05D003630 8.2e-48 194.5 122 77.0
Carub.0007s2280 Capsella rubella HOM05D003187 ORTHO05D003630 8.2e-48 194.5 124 75.0
Thhalv10025077m.g Eutrema salsugineum HOM05D003187 ORTHO05D003630 8.2e-48 194.5 124 76.6
BcaC06g30583 Brassica carinata HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
BcaC09g51513 Brassica carinata HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
A01p10400 Brassica napus HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
A03p51310 Brassica napus HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 75.8
C01p12350 Brassica napus HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
BolC1t01210H Brassica oleracea HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
BraA01t00987Z Brassica rapa HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
BraA08t33360Z Brassica rapa HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 76.6
AUR62001143 Chenopodium quinoa HOM05D003187 ORTHO05D003630 1.1e-47 194.1 124 73.4
Rhsim09G0171800 Rhododendron simsii HOM05D003187 ORTHO05D003630 1.1e-47 194.1 144 66.7
AL7G35850 Arabidopsis lyrata HOM05D003187 ORTHO05D003630 1.4e-47 193.7 124 75.8
A08p13810 Brassica napus HOM05D003187 ORTHO05D003630 1.4e-47 193.7 124 75.8
BraA03t14212Z Brassica rapa HOM05D003187 ORTHO05D003630 1.4e-47 193.7 123 76.4
SHI03522 Sapria himalayana HOM05D003187 ORTHO05D003630 1.4e-47 193.7 124 72.6
CARHR225270 Cardamine hirsuta HOM05D003187 ORTHO05D003630 3.1e-47 192.6 124 75.0
Os03g0313600 Oryza sativa ssp. japonica HOM05D003187 ORTHO05D003630 3.1e-47 192.6 124 73.4
PGR042G2760 Punica granatum HOM05D003187 ORTHO05D003630 3.1e-47 192.6 124 74.2
Sp7g15590 Schrenkiella parvula HOM05D003187 ORTHO05D003630 3.1e-47 192.6 124 75.0
AT4G18440 Arabidopsis thaliana HOM05D003187 ORTHO05D003630 4.1e-47 192.2 124 75.8
AUR62016534 Chenopodium quinoa HOM05D003187 ORTHO05D003630 4.1e-47 192.2 124 72.6
Hma1.2p1_0710F.1_g207370 Hydrangea macrophylla HOM05D003187 ORTHO05D003630 4.1e-47 192.2 124 71.0
C03p81220 Brassica napus HOM05D003187 ORTHO05D003630 6.9e-47 191.4 122 76.2
Zm00001eb015040 Zea mays HOM05D003187 ORTHO05D003630 2.0e-46 189.9 124 70.2
HPP92_018291 Vanilla planifolia HOM05D003187 ORTHO05D003630 2.6e-46 189.5 124 73.4
Aa31LG6G1160 Aethionema arabicum HOM05D003187 ORTHO05D003630 1.0e-45 187.6 128 74.2
HanXRQChr01g0017651 Helianthus annuus HOM05D003187 ORTHO05D003630 1.3e-45 187.2 127 68.5
FvH4_5g04980 Fragaria vesca HOM05D003187 ORTHO05D003630 5.0e-45 185.3 124 71.8
TWI53G1626 Tripterygium wilfordii HOM05D003187 ORTHO05D003630 6.1e-43 178.3 124 71.8
AagrBONN_evm.TU.Sc2ySwM_228.2882 Anthoceros agrestis HOM05D003187 ORTHO05D003630 7.4e-41 171.4 154 57.1
FAN03G0133 Fragaria x ananassa HOM05D003187 ORTHO05D003630 1.8e-39 166.8 109 74.3
SMO356G0706 Selaginella moellendorffii HOM05D003187 ORTHO05D003630 5.3e-39 165.2 128 64.8
BcaB04g18477 Brassica carinata HOM05D003187 ORTHO05D003630 2.0e-38 163.3 122 69.7
Actinidia00931 Actinidia chinensis HOM05D003187 ORTHO05D003630 3.8e-37 159.1 101 76.2
Actinidia25354 Actinidia chinensis HOM05D003187 ORTHO05D003630 5.0e-37 158.7 124 66.9
Zm00001eb297360 Zea mays HOM05D003187 ORTHO05D003630 1.9e-36 156.8 123 61.8
CDE12G0549 Ceratophyllum demersum HOM05D003187 ORTHO05D003630 4.7e-35 152.1 150 55.3
Nitab4.5_0007356g0030 Nicotiana tabacum HOM05D003187 ORTHO05D003630 1.4e-34 150.6 88 79.5
Ah.08g214730 Amaranthus hybridus HOM05D003187 ORTHO05D003630 1.8e-34 150.2 109 68.8
ClCG07G003910 Citrullus lanatus HOM05D003187 ORTHO05D003630 1.3e-32 144.1 88 79.5
Nn2g11364 Nelumbo nucifera HOM05D003187 ORTHO05D003630 1.8e-31 140.2 82 80.5
Zm00001eb113520 Zea mays HOM05D003187 ORTHO05D003630 5.0e-29 132.1 115 57.4
AagrBONN_evm.TU.Sc2ySwM_228.636 Anthoceros agrestis HOM05D003187 ORTHO05D003630 1.1e-28 131.0 88 67.0
FvH4_7g08523 Fragaria vesca HOM05D003187 ORTHO05D003630 2.7e-27 126.3 124 54.0
FvH4_7g08522 Fragaria vesca HOM05D003187 ORTHO05D003630 2.6e-25 119.8 85 71.8
Zm00001eb319880 Zea mays HOM05D003187 ORTHO05D003630 2.8e-24 116.3 97 59.8
Glyma.20G147852 Glycine max HOM05D003187 ORTHO05D003630 1.5e-20 104.0 101 56.4
RcHm_v2.0_Chr5g0043801 Rosa chinensis HOM05D003187 ORTHO05D003630 1.5e-20 104.0 154 40.9
RcHm_v2.0_Chr7g0186531 Rosa chinensis HOM05D003187 ORTHO05D003630 5.5e-20 102.1 120 45.8
Actinidia13914 Actinidia chinensis HOM05D003187 ORTHO05D003630 7.2e-20 101.7 74 70.3
RcHm_v2.0_Chr5g0043781 Rosa chinensis HOM05D003187 ORTHO05D003630 2.1e-19 100.1 99 56.6
Nitab4.5_0012646g0020 Nicotiana tabacum HOM05D003187 ORTHO05D003630 1.2e-17 94.4 58 77.6
HanXRQChr11g0322721 Helianthus annuus HOM05D003187 ORTHO05D003630 5.4e-15 85.5 49 79.6
PSO170G6881 Papaver somniferum HOM05D003187 ORTHO05D003630 8.6e-13 78.2 97 48.5
Psat5g091080 Pisum sativum HOM05D003187 ORTHO05D003630 5.6e-12 75.5 55 65.5
Psat6g139960 Pisum sativum HOM05D003187 ORTHO05D003630 5.6e-12 75.5 55 65.5
FvH4_5g11350 Fragaria vesca HOM05D003187 ORTHO05D003630 4.7e-11 72.4 120 32.5
FAN08G1218 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-11 72.4 120 33.3
FAN18G2583 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-11 72.4 120 32.5
FAN18G3798 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-11 72.4 120 32.5
ATR0686G248 Amborella trichopoda HOM05D003187 ORTHO05D003630 8.0e-11 71.6 105 40.0
CARHR224760 Cardamine hirsuta HOM05D003187 ORTHO05D003630 2.3e-10 70.1 78 55.1
BcaC03g16804 Brassica carinata HOM05D003187 ORTHO05D003630 4.9e-08 62.4 45 71.1
Ca_05654_v3 Cicer arietinum L. HOM05D003187 ORTHO05D003630 1.1e-07 61.2 37 78.4
CSS0022977 Camellia sinensis var. sinensis HOM05D003187 ORTHO05D003630 1.2e-06 57.8 65 52.3
CSS0044344 Camellia sinensis var. sinensis HOM05D003187 ORTHO05D003630 1.2e-06 57.8 65 52.3
CAN.G1271.9 Capsicum annuum HOM05D003187 ORTHO05D003630 1.2e-06 57.8 37 73.0
FAN10G2756 Fragaria x ananassa HOM05D003187 ORTHO05D003630 1.2e-06 57.8 36 75.0
SEGI_19518 Sequoiadendron giganteum HOM05D016871 ORTHO05D007448 3.5e-06 56.2 70 40.0


User provided reference genes

Program Settings