Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 6.4e-241 837.0 428 100.0
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 9.6e-72 275.0 427 37.2
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.3e-65 254.6 127 100.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.3e-63 248.1 432 34.5
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 3.8e-60 236.5 391 34.3
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 6.5e-60 235.7 343 38.2
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 2.7e-58 230.3 425 33.4
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 6.1e-58 229.2 418 33.0
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 3.9e-57 226.5 424 34.4
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 6.7e-57 225.7 422 32.9
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 6.7e-57 225.7 439 31.7
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 8.8e-57 225.3 428 33.9
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.1e-56 224.9 412 35.2
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 9.7e-56 221.9 426 31.7
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 2.2e-55 220.7 423 33.3
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 2.2e-55 220.7 425 32.5
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.8e-55 220.3 422 33.9
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 6.3e-55 219.2 396 32.1
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 8.2e-55 218.8 397 34.5
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 1.1e-54 218.4 348 36.2
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.4e-54 218.0 428 32.9
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 1.4e-54 218.0 428 31.8
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 2.4e-54 217.2 422 30.3
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.4e-54 217.2 415 31.8
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.1e-54 216.9 427 32.6
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 5.3e-54 216.1 417 33.3
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 5.3e-54 216.1 427 32.8
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 5.3e-54 216.1 422 32.5
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 2.0e-53 214.2 423 31.2
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 2.0e-53 214.2 430 32.1
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 2.0e-53 214.2 423 32.2
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.4e-53 213.4 423 32.6
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 3.4e-53 213.4 426 31.7
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 4.5e-53 213.0 424 32.8
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 1.0e-52 211.8 413 33.2
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.3e-52 211.5 418 32.8
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 1.3e-52 211.5 418 32.5
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 1.7e-52 211.1 453 30.9
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 1.7e-52 211.1 396 32.3
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 2.2e-52 210.7 416 31.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 5.0e-52 209.5 425 31.3
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 8.5e-52 208.8 451 31.9
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 1.1e-51 208.4 418 30.9
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 1.9e-51 207.6 422 31.8
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 7.2e-51 205.7 424 31.1
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 3.6e-50 203.4 416 31.5
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 3.6e-50 203.4 413 32.0
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 6.1e-50 202.6 420 31.7
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 3.9e-49 199.9 437 30.7
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 5.1e-49 199.5 422 31.3
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.5e-48 198.0 419 30.8
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.0e-48 197.6 425 30.4
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 2.8e-47 193.7 409 32.3
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 3.7e-47 193.4 310 37.1
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.7e-47 193.4 327 34.9
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 8.2e-47 192.2 451 30.6
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 8.2e-47 192.2 367 31.1
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 1.8e-46 191.0 369 32.2
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 3.1e-46 190.3 471 28.9
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 7.0e-46 189.1 432 29.6
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 1.2e-45 188.3 423 30.7
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.2e-45 188.3 422 32.2
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.0e-44 185.3 426 29.3
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.3e-44 184.9 373 32.7
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.5e-43 181.4 299 36.8
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 9.4e-43 178.7 299 34.1
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 1.6e-42 177.9 459 28.1
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.0e-41 175.3 247 35.2
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 2.0e-40 171.0 257 38.1
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 4.5e-37 159.8 302 31.5
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 4.5e-37 159.8 519 25.6
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.8e-36 156.8 393 28.2
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 3.8e-36 156.8 347 32.0
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 4.2e-35 153.3 370 27.8
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 3.6e-34 150.2 355 26.8
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.0e-33 148.7 313 33.5
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 1.5e-32 144.8 403 28.8
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 5.4e-22 109.8 196 30.6
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 2.0e-21 107.8 272 26.1
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.7e-20 104.8 366 25.4
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.6e-13 81.6 200 30.0
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 4.6e-13 80.1 148 31.8
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.9e-13 79.7 141 34.0
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 7.8e-13 79.3 177 32.2
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 4.4e-08 63.5 143 29.4
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 4.4e-08 63.5 143 29.4
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 4.1e-06 57.0 150 28.0
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-06 57.0 316 23.1


User provided reference genes

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