Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.2e-70 269.6 132 100.0
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.8e-54 215.3 130 75.4
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 8.1e-54 213.8 130 74.6
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.1e-53 213.4 130 74.6
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.4e-53 212.2 130 75.4
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.1e-53 211.8 130 75.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 5.3e-53 211.1 130 73.8
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.8
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.8
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.8
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.8
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 74.6
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.8
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.1
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 9.0e-53 210.3 130 73.1
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.2e-52 209.9 130 73.8
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.2e-52 209.9 130 73.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.5e-52 209.5 130 73.8
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.0e-52 209.1 130 73.8
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 2.0e-52 209.1 131 72.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 2.0e-52 209.1 130 74.6
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.0e-52 209.1 130 73.1
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.0e-52 209.1 130 73.8
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.0e-52 209.1 130 73.1
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.6e-52 208.8 130 73.8
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.4e-52 208.4 130 73.1
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 4.5e-52 208.0 130 72.3
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 5.8e-52 207.6 130 73.8
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 5.8e-52 207.6 130 73.8
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 5.8e-52 207.6 130 73.8
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 7.6e-52 207.2 131 71.0
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 7.6e-52 207.2 130 72.3
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 9.9e-52 206.8 130 73.8
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 9.9e-52 206.8 130 71.5
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 9.9e-52 206.8 128 74.2
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.3e-51 206.5 130 72.3
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.3e-51 206.5 130 74.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 1.7e-51 206.1 130 72.3
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.7e-51 206.1 130 73.8
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 2.9e-51 205.3 130 70.8
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.9e-51 205.3 130 71.5
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.9e-51 205.3 130 72.3
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 3.8e-51 204.9 131 71.8
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 4.9e-51 204.5 127 73.2
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.9e-51 204.5 130 71.5
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.9e-51 204.5 127 73.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.9e-51 204.5 127 73.2
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 4.9e-51 204.5 127 73.2
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 4.9e-51 204.5 130 72.3
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 6.4e-51 204.1 131 71.0
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 8.4e-51 203.8 130 69.2
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.1e-50 203.4 130 70.0
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.4e-50 203.0 128 69.5
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.4e-50 203.0 130 70.8
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.4e-50 203.0 131 71.0
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.9e-50 202.6 128 70.3
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.4e-50 202.2 130 70.0
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.4e-50 202.2 130 69.2
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 2.4e-50 202.2 127 71.7
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 4.2e-50 201.4 130 70.0
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 4.2e-50 201.4 130 68.5
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 4.2e-50 201.4 128 70.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 4.2e-50 201.4 130 68.5
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 5.5e-50 201.1 130 66.9
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 5.5e-50 201.1 130 69.2
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 9.3e-50 200.3 128 71.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.2e-49 199.9 130 65.4
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.2e-49 199.9 130 70.0
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.6e-49 199.5 127 70.1
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 2.1e-49 199.1 130 67.7
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.1e-49 199.1 130 67.7
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 2.1e-49 199.1 130 67.7
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.1e-49 199.1 130 67.7
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.1e-49 199.1 130 67.7
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 2.1e-49 199.1 130 71.5
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 2.7e-49 198.7 130 65.4
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 3.5e-49 198.4 130 70.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.0e-49 197.6 130 69.2
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 7.9e-49 197.2 130 67.7
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 7.9e-49 197.2 128 70.3
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.0e-48 196.8 130 70.8
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.8e-48 196.1 130 64.6
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.8e-48 196.1 130 66.9
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.8e-48 196.1 128 67.2
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.3e-48 195.7 130 68.5
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.3e-48 195.7 130 65.4
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 3.0e-48 195.3 128 66.4
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 6.7e-48 194.1 130 67.7
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.1e-47 193.4 130 68.5
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.9e-47 192.6 130 64.6
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 3.3e-47 191.8 126 69.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.6e-47 191.0 130 66.9
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.6e-46 189.5 128 64.8
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.8e-46 188.7 115 76.5
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 2.8e-46 188.7 129 68.2
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 8.2e-46 187.2 182 53.8
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.1e-45 186.8 144 61.1
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.4e-45 185.7 128 67.2
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 4.0e-45 184.9 112 75.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 4.0e-45 184.9 129 68.2
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.0e-43 180.3 130 63.8
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 2.9e-43 178.7 172 50.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 8.4e-43 177.2 125 66.4
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-42 176.8 111 72.1
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.4e-42 176.4 114 71.1
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.1e-42 174.1 153 56.2
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 2.1e-41 172.6 131 59.5
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.5e-39 165.6 130 60.0
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.3e-35 153.3 130 57.7
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 2.2e-30 136.0 83 77.1
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 9.1e-29 130.6 83 72.3
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 2.0e-23 112.8 129 45.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 4.4e-23 111.7 130 43.1
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.1e-21 107.1 137 38.7
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 7.0e-13 77.8 50 72.0
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.3e-11 73.6 45 62.2
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 8.5e-11 70.9 50 66.0


User provided reference genes

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