Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04534 Sequoiadendron giganteum HOM05D006763 ORTHO05D008659 8.8e-75 283.5 139 100.0
SEGI_33778 Sequoiadendron giganteum HOM05D006763 ORTHO05D008659 3.5e-31 138.7 75 88.0
PGR044G0737 Punica granatum HOM05D006763 ORTHO05D008659 1.7e-17 93.2 69 65.2
Eucgr.K03362 Eucalyptus grandis HOM05D006763 ORTHO05D008659 4.9e-17 91.7 70 57.1
Glyma.19G156300 Glycine max HOM05D006763 ORTHO05D008659 2.4e-16 89.4 70 55.7
SGA_v2.0_scaffold80G25933 Striga asiatica HOM05D006763 ORTHO05D008659 3.2e-16 89.0 72 55.6
Sabra05G0159900 Salix brachista HOM05D006763 ORTHO05D008659 4.2e-16 88.6 71 57.7
Sed0021638 Sechium edule HOM05D006763 ORTHO05D008659 4.2e-16 88.6 70 57.1
Lj1g0009322 Lotus japonicus HOM05D006763 ORTHO05D008659 7.1e-16 87.8 70 55.7
COL.COLO4_09092 Corchorus olitorius HOM05D006763 ORTHO05D008659 9.3e-16 87.4 59 66.1
MBI09_g25278_MAGBIO Magnolia biondii HOM05D006763 ORTHO05D008659 9.3e-16 87.4 72 54.2
CANSAT64G0095 Cannabis sativa HOM05D006763 ORTHO05D008659 1.6e-15 86.7 70 58.6
Duzib133G0216 Durio zibethinus HOM05D006763 ORTHO05D008659 2.1e-15 86.3 70 52.9
FvH4_2g23540 Fragaria vesca HOM05D006763 ORTHO05D008659 2.1e-15 86.3 63 63.5
FAN15G1771 Fragaria x ananassa HOM05D006763 ORTHO05D008659 2.1e-15 86.3 63 63.5
FAN20G2291 Fragaria x ananassa HOM05D006763 ORTHO05D008659 2.1e-15 86.3 63 63.5
Gohir.D11G128100 Gossypium hirsutum HOM05D006763 ORTHO05D008659 2.1e-15 86.3 58 67.2
Gorai.007G137000 Gossypium raimondii HOM05D006763 ORTHO05D008659 2.1e-15 86.3 58 67.2
QL12p021761 Quercus lobata HOM05D006763 ORTHO05D008659 2.1e-15 86.3 70 57.1
CAN.G1549.1 Capsicum annuum HOM05D006763 ORTHO05D008659 2.7e-15 85.9 70 57.1
Hund17999 Selenicereus undatus HOM05D006763 ORTHO05D008659 2.7e-15 85.9 63 61.9
Thecc.01G279000 Theobroma cacao HOM05D006763 ORTHO05D008659 2.7e-15 85.9 59 61.0
Phvul.001G151200 Phaseolus vulgaris HOM05D006763 ORTHO05D008659 3.5e-15 85.5 66 62.1
SalBow6G0739 Salvia bowleyana HOM05D006763 ORTHO05D008659 3.5e-15 85.5 59 64.4
vmacro02573 Vaccinium macrocarpon HOM05D006763 ORTHO05D008659 3.5e-15 85.5 70 52.9
SMO232G0052 Selaginella moellendorffii HOM05D006763 ORTHO05D008659 4.6e-15 85.1 64 59.4
Sc13g0009100 Simmondsia chinensis HOM05D006763 ORTHO05D008659 4.6e-15 85.1 60 65.0
CDE08G1556 Ceratophyllum demersum HOM05D006763 ORTHO05D008659 6.0e-15 84.7 63 57.1
Nn5g27825 Nelumbo nucifera HOM05D006763 ORTHO05D008659 6.0e-15 84.7 67 58.2
arahy.Tifrunner.gnm1.ann1.0EZ80L Arachis hypogaea HOM05D006763 ORTHO05D008659 7.8e-15 84.3 70 52.9
Ciclev10020657m.g Citrus clementina HOM05D006763 ORTHO05D008659 7.8e-15 84.3 61 63.9
Gohir.A11G122800 Gossypium hirsutum HOM05D006763 ORTHO05D008659 7.8e-15 84.3 58 65.5
Potri.005G209900 Populus trichocarpa HOM05D006763 ORTHO05D008659 7.8e-15 84.3 70 55.7
GSVIVG01011078001 Vitis vinifera HOM05D006763 ORTHO05D008659 7.8e-15 84.3 70 55.7
arahy.Tifrunner.gnm1.ann1.MN1VYN Arachis hypogaea HOM05D006763 ORTHO05D008659 1.0e-14 84.0 70 52.9
Cc03_g08130 Coffea canephora HOM05D006763 ORTHO05D008659 1.0e-14 84.0 70 57.1
FAN27G0265 Fragaria x ananassa HOM05D006763 ORTHO05D008659 1.0e-14 84.0 63 61.9
RcHm_v2.0_Chr6g0291011 Rosa chinensis HOM05D006763 ORTHO05D008659 1.0e-14 84.0 63 60.3
Solyc06g084270.3 Solanum lycopersicum HOM05D006763 ORTHO05D008659 1.0e-14 84.0 59 69.5
CSS0026117 Camellia sinensis var. sinensis HOM05D006763 ORTHO05D008659 1.3e-14 83.6 78 50.0
Rhsim13G0025100 Rhododendron simsii HOM05D006763 ORTHO05D008659 1.3e-14 83.6 59 64.4
MD11G1284900 Malus domestica HOM05D006763 ORTHO05D008659 1.7e-14 83.2 70 52.9
TAR624G1402 Trochodendron aralioides HOM05D006763 ORTHO05D008659 1.7e-14 83.2 70 52.9
Cpa.g.sc370.8 Carica papaya HOM05D006763 ORTHO05D008659 2.3e-14 82.8 70 55.7
TWI23G0709 Tripterygium wilfordii HOM05D006763 ORTHO05D008659 2.3e-14 82.8 70 54.3
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 2.3e-14 82.8 65 55.4
EL10Ac1g02180 Beta vulgaris HOM05D006763 ORTHO05D008659 3.0e-14 82.4 61 62.3
Sopen06g035660 Solanum pennellii HOM05D006763 ORTHO05D008659 3.0e-14 82.4 59 67.8
Zm00001eb289310 Zea mays HOM05D006763 ORTHO05D008659 3.0e-14 82.4 60 60.0
Actinidia00754 Actinidia chinensis HOM05D006763 ORTHO05D008659 3.9e-14 82.0 59 61.0
Oeu047876.1 Olea europaea HOM05D006763 ORTHO05D008659 3.9e-14 82.0 70 52.9
Atru.chr5.1442 Acer truncatum HOM05D006763 ORTHO05D008659 5.1e-14 81.6 59 62.7
ATR1134G007 Amborella trichopoda HOM05D006763 ORTHO05D008659 5.1e-14 81.6 70 50.0
MSTRG.17442 Avicennia marina HOM05D006763 ORTHO05D008659 5.1e-14 81.6 59 64.4
Ca_19049_v3 Cicer arietinum L. HOM05D006763 ORTHO05D008659 6.6e-14 81.3 67 58.2
PGSC0003DMG400020125 Solanum tuberosum HOM05D006763 ORTHO05D008659 6.6e-14 81.3 70 55.7
TPR.G9923 Trifolium pratense HOM05D006763 ORTHO05D008659 6.6e-14 81.3 59 61.0
Cfa006143 Carpinus fangiana HOM05D006763 ORTHO05D008659 8.7e-14 80.9 70 51.4
Manes.01G207500 Manihot esculenta HOM05D006763 ORTHO05D008659 8.7e-14 80.9 70 52.9
Psat3g064200 Pisum sativum HOM05D006763 ORTHO05D008659 8.7e-14 80.9 70 50.0
Prupe.8G071100 Prunus persica HOM05D006763 ORTHO05D008659 8.7e-14 80.9 70 51.4
CiPaw.07G092000 Carya illinoinensis HOM05D006763 ORTHO05D008659 1.1e-13 80.5 64 59.4
Mapoly0019s0155 Marchantia polymorpha HOM05D006763 ORTHO05D008659 1.1e-13 80.5 61 62.3
Nitab4.5_0000759g0180 Nicotiana tabacum HOM05D006763 ORTHO05D008659 1.1e-13 80.5 70 54.3
Haze_04707 Corylus avellana HOM05D006763 ORTHO05D008659 1.5e-13 80.1 70 50.0
THA.LOC104815942 Tarenaya hassleriana HOM05D006763 ORTHO05D008659 1.5e-13 80.1 59 61.0
AUR62035019 Chenopodium quinoa HOM05D006763 ORTHO05D008659 2.5e-13 79.3 59 61.0
AUR62040532 Chenopodium quinoa HOM05D006763 ORTHO05D008659 2.5e-13 79.3 59 61.0
Medtr7g094890 Medicago truncatula HOM05D006763 ORTHO05D008659 2.5e-13 79.3 70 48.6
Peaxi162Scf00783g00325 Petunia axillaris HOM05D006763 ORTHO05D008659 2.5e-13 79.3 59 62.7
Migut.N02055 Erythranthe guttata HOM05D006763 ORTHO05D008659 3.3e-13 79.0 69 55.1
Migut.O00747 Erythranthe guttata HOM05D006763 ORTHO05D008659 3.3e-13 79.0 69 55.1
Nitab4.5_0008797g0050 Nicotiana tabacum HOM05D006763 ORTHO05D008659 3.3e-13 79.0 70 52.9
Hma1.2p1_0434F.1_g152210 Hydrangea macrophylla HOM05D006763 ORTHO05D008659 5.6e-13 78.2 70 51.4
Pp3c16_16460 Physcomitrium patens HOM05D006763 ORTHO05D008659 5.6e-13 78.2 71 53.5
Lj2A1172G33 Lonicera japonica HOM05D006763 ORTHO05D008659 7.3e-13 77.8 56 64.3
Sp6g02820 Schrenkiella parvula HOM05D006763 ORTHO05D008659 7.3e-13 77.8 59 62.7
PSO170G5955 Papaver somniferum HOM05D006763 ORTHO05D008659 9.6e-13 77.4 61 60.7
Os05g0430400 Oryza sativa ssp. japonica HOM05D006763 ORTHO05D008659 1.3e-12 77.0 60 56.7
PSO782G3408 Papaver somniferum HOM05D006763 ORTHO05D008659 1.3e-12 77.0 61 59.0
Dinv34755 Davidia involucrata HOM05D006763 ORTHO05D008659 1.6e-12 76.6 70 48.6
ECA246G4623 Erigeron canadensis HOM05D006763 ORTHO05D008659 1.6e-12 76.6 70 52.9
ECA236G3460 Erigeron canadensis HOM05D006763 ORTHO05D008659 4.8e-12 75.1 70 51.4
Aa31LG5G2450 Aethionema arabicum HOM05D006763 ORTHO05D008659 8.1e-12 74.3 66 53.0
unitig_21.g20293 Utricularia gibba HOM05D006763 ORTHO05D008659 8.1e-12 74.3 61 59.0
AT4G02790 Arabidopsis thaliana HOM05D006763 ORTHO05D008659 1.1e-11 73.9 59 59.3
A03p30840 Brassica napus HOM05D006763 ORTHO05D008659 1.1e-11 73.9 59 61.0
BraA03t12262Z Brassica rapa HOM05D006763 ORTHO05D008659 1.1e-11 73.9 59 61.0
HanXRQChr04g0118871 Helianthus annuus HOM05D006763 ORTHO05D008659 2.4e-11 72.8 70 50.0
AL6G50140 Arabidopsis lyrata HOM05D006763 ORTHO05D008659 3.1e-11 72.4 59 57.6
BcaC01g06729 Brassica carinata HOM05D006763 ORTHO05D008659 3.1e-11 72.4 59 59.3
C03p37530 Brassica napus HOM05D006763 ORTHO05D008659 3.1e-11 72.4 59 59.3
BolC3t16046H Brassica oleracea HOM05D006763 ORTHO05D008659 3.1e-11 72.4 59 59.3
CARHR251160 Cardamine hirsuta HOM05D006763 ORTHO05D008659 3.1e-11 72.4 59 59.3
Lsat_1_v5_gn_8_56421 Lactuca sativa HOM05D006763 ORTHO05D008659 4.0e-11 72.0 60 61.7
Carub.0006s3427 Capsella rubella HOM05D006763 ORTHO05D008659 1.2e-10 70.5 59 59.3
MELO3C025054.2 Cucumis melo HOM05D006763 ORTHO05D008659 2.2e-09 66.2 39 76.9
CBR_g41288 Chara braunii HOM05D006763 ORTHO05D008659 1.9e-08 63.2 70 44.3
VMungo1383G0511 Vigna mungo HOM05D006763 ORTHO05D008659 1.6e-07 60.1 55 52.7
Ah.00g000250 Amaranthus hybridus HOM05D006763 ORTHO05D008659 5.1e-06 55.1 47 57.4


User provided reference genes

Program Settings