Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04529 Sequoiadendron giganteum HOM05D040278 ORTHO05D003152 8.9e-105 383.6 197 100.0
SEGI_00659 Sequoiadendron giganteum HOM05D040278 ORTHO05D385307 1.3e-47 193.7 169 63.9
SEGI_21454 Sequoiadendron giganteum HOM05D001984 ORTHO05D002057 1.5e-24 117.1 199 40.7
SEGI_26039 Sequoiadendron giganteum HOM05D001984 ORTHO05D387096 5.9e-24 115.2 198 40.4
SEGI_34866 Sequoiadendron giganteum HOM05D001984 ORTHO05D385509 1.4e-17 94.0 181 37.0
SEGI_16730 Sequoiadendron giganteum HOM05D001984 ORTHO05D003152 1.0e-12 77.8 187 29.4
SEGI_04546 Sequoiadendron giganteum HOM05D040278 ORTHO05D384821 3.3e-11 72.8 177 34.5
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 1.2e-08 64.3 186 25.8
Lsat_1_v5_gn_3_83360 Lactuca sativa HOM05D001984 ORTHO05D002057 1.2e-08 64.3 159 28.3
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 2.6e-08 63.2 175 26.3
TAR629G2227 Trochodendron aralioides HOM05D001984 ORTHO05D002057 4.5e-08 62.4 163 31.9
Rhsim03G0214600 Rhododendron simsii HOM05D001023 ORTHO05D000912 1.0e-07 61.2 182 26.9
TAR374G1310 Trochodendron aralioides HOM05D001984 ORTHO05D002057 1.0e-07 61.2 167 31.7
GSVIVG01011766001 Vitis vinifera HOM05D001984 ORTHO05D002057 2.9e-07 59.7 157 30.6
SEGI_08834 Sequoiadendron giganteum HOM05D001984 ORTHO05D002057 3.8e-07 59.3 167 30.5
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 5.0e-07 58.9 177 26.6
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 6.5e-07 58.5 195 27.2
GSVIVG01030865001 Vitis vinifera HOM05D001984 ORTHO05D002057 6.5e-07 58.5 162 28.4
Glyma.07G050100 Glycine max HOM05D002255 ORTHO05D002288 8.5e-07 58.2 76 38.2
CsaV3_5G024000 Cucumis sativus L. HOM05D001984 ORTHO05D002057 1.1e-06 57.8 84 35.7
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 1.5e-06 57.4 172 27.9
Nn3g18858 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.9e-06 57.0 126 31.0
Sed0024743 Sechium edule HOM05D001984 ORTHO05D002057 1.9e-06 57.0 138 29.0
ClCG03G008730 Citrullus lanatus HOM05D001984 ORTHO05D002057 2.5e-06 56.6 84 35.7
Lalb_Chr10g0100851 Lupinus albus HOM05D002255 ORTHO05D002288 2.5e-06 56.6 103 33.0
Manes.01G115500 Manihot esculenta HOM05D001984 ORTHO05D002057 2.5e-06 56.6 200 28.0
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 2.5e-06 56.6 180 23.3
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.2e-06 55.8 177 26.0
TAR019G0006 Trochodendron aralioides HOM05D001984 ORTHO05D002057 4.2e-06 55.8 167 29.9
Haze_14222 Corylus avellana HOM05D001984 ORTHO05D002057 5.5e-06 55.5 87 33.3
Gohir.A03G122400 Gossypium hirsutum HOM05D001984 ORTHO05D002057 5.5e-06 55.5 211 27.5
SEGI_16575 Sequoiadendron giganteum HOM05D001984 ORTHO05D002057 5.5e-06 55.5 206 26.2
SEGI_25160 Sequoiadendron giganteum HOM05D002255 ORTHO05D002288 5.5e-06 55.5 119 31.1
PGSC0003DMG400030604 Solanum tuberosum HOM05D001984 ORTHO05D002057 5.5e-06 55.5 147 23.8
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 7.2e-06 55.1 187 27.3
Medtr8g017100 Medicago truncatula HOM05D002255 ORTHO05D002288 7.2e-06 55.1 82 37.8
SEGI_07272 Sequoiadendron giganteum HOM05D001984 ORTHO05D002057 7.2e-06 55.1 170 26.5
Atru.chr11.436 Acer truncatum HOM05D001984 ORTHO05D002057 9.4e-06 54.7 110 31.8
Actinidia34261 Actinidia chinensis HOM05D002916 ORTHO05D003152 9.4e-06 54.7 165 29.1
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 9.4e-06 54.7 169 29.0
Ciclev10016683m.g Citrus clementina HOM05D001984 ORTHO05D002057 9.4e-06 54.7 165 29.1
ECA246G2339 Erigeron canadensis HOM05D001984 ORTHO05D002057 9.4e-06 54.7 114 28.9
Gorai.005G162500 Gossypium raimondii HOM05D001984 ORTHO05D002057 9.4e-06 54.7 211 27.0
Hma1.2p1_0464F.1_g158260 Hydrangea macrophylla HOM05D001984 ORTHO05D002057 9.4e-06 54.7 167 30.5
Os06g0260000 Oryza sativa ssp. japonica HOM05D001984 ORTHO05D002057 9.4e-06 54.7 91 34.1


User provided reference genes

Program Settings