Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04455 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 1.2e-53 213.0 111 100.0
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 3.4e-13 78.6 106 34.0
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 2.2e-12 75.9 106 37.7
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 2.2e-12 75.9 107 33.6
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 2.2e-12 75.9 109 33.0
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 8.5e-12 73.9 108 35.2
Gohir.A05G328600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 2.5e-11 72.4 108 36.1
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 2.5e-11 72.4 108 36.1
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 2.5e-11 72.4 108 36.1
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 3.2e-11 72.0 110 33.6
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 9.4e-11 70.5 107 33.6
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 9.4e-11 70.5 107 30.8
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.2e-10 70.1 112 34.8
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.1e-10 69.3 107 34.6
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 3.6e-10 68.6 106 34.0
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 7.9e-10 67.4 107 29.0
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 1.8e-09 66.2 107 30.8
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 2.3e-09 65.9 109 33.9
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 2.3e-09 65.9 108 32.4
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 3.9e-09 65.1 109 31.2
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 5.1e-09 64.7 104 31.7
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 5.1e-09 64.7 106 29.2
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 8.8e-09 63.9 105 29.5
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 1.1e-08 63.5 105 31.4
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 1.5e-08 63.2 106 32.1
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.5e-08 63.2 108 30.6
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.9e-08 62.8 108 30.6
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 2.5e-08 62.4 108 30.6
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 2.5e-08 62.4 105 29.5
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 3.3e-08 62.0 104 33.7
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 3.3e-08 62.0 108 30.6
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 4.3e-08 61.6 109 32.1
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 7.4e-08 60.8 99 33.3
Lj4C310T3 Lonicera japonica HOM05D003876 ORTHO05D004560 9.7e-08 60.5 105 32.4
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 9.7e-08 60.5 105 29.5
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 9.7e-08 60.5 106 32.1
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 1.3e-07 60.1 105 27.6
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 1.3e-07 60.1 107 29.9
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 1.7e-07 59.7 107 28.0
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 2.2e-07 59.3 110 26.4
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 2.2e-07 59.3 110 26.4
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 2.2e-07 59.3 95 31.6
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 3.7e-07 58.5 107 29.0
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 4.8e-07 58.2 104 31.7
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 1.1e-06 57.0 107 28.0
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 1.1e-06 57.0 109 26.6
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 1.4e-06 56.6 107 31.8
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.4e-06 56.6 104 28.8
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 2.4e-06 55.8 107 27.1
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 2.4e-06 55.8 96 35.4
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 3.1e-06 55.5 107 27.1
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 3.1e-06 55.5 107 29.9
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 4.1e-06 55.1 107 29.0
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 4.1e-06 55.1 109 30.3
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 6.9e-06 54.3 103 30.1
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 9.1e-06 53.9 96 31.2
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 9.1e-06 53.9 107 25.2


User provided reference genes

Program Settings