Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04443 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 3.6e-177 624.8 311 100.0
SEGI_36855 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 5.5e-117 424.9 221 94.6
SEGI_39289 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 9.4e-77 291.2 250 61.2
SEGI_14946 Sequoiadendron giganteum HOM05D008993 ORTHO05D007167 7.5e-74 281.6 228 64.9
SEGI_05277 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 2.3e-70 270.0 227 62.1
SEGI_25921 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.9e-33 146.7 219 41.1
SEGI_12066 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.7e-31 140.2 224 40.2
SEGI_02863 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 7.8e-31 138.7 228 38.6
SEGI_05802 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 1.5e-29 134.4 226 38.9
SEGI_20076 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 1.5e-29 134.4 234 37.6
SEGI_39249 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 1.1e-19 101.7 166 44.0
SEGI_18320 Sequoiadendron giganteum HOM05D000615 ORTHO05D000447 2.0e-18 97.4 224 29.9
SEGI_39243 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 7.9e-15 85.5 85 50.6
SEGI_25076 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 1.4e-11 74.7 120 40.0
Nitab4.5_0003917g0020 Nicotiana tabacum HOM05D000615 ORTHO05D000447 4.9e-09 66.2 245 27.8
Nitab4.5_0000229g0030 Nicotiana tabacum HOM05D000615 ORTHO05D000447 6.5e-09 65.9 212 27.8
Peaxi162Scf00128g00056 Petunia axillaris HOM05D000615 ORTHO05D000447 6.5e-09 65.9 226 27.0
QL10p005950 Quercus lobata HOM05D000615 ORTHO05D000447 6.5e-09 65.9 227 23.8
GSVIVG01000576001 Vitis vinifera HOM05D000615 ORTHO05D000447 6.5e-09 65.9 236 24.2
SEGI_19527 Sequoiadendron giganteum HOM05D000199 ORTHO05D000550 1.9e-08 64.3 51 60.8
FAN06G4356 Fragaria x ananassa HOM05D000615 ORTHO05D000447 3.2e-08 63.5 203 24.1
FAN10G3496 Fragaria x ananassa HOM05D000615 ORTHO05D000447 4.2e-08 63.2 191 25.7
PGSC0003DMG400016972 Solanum tuberosum HOM05D000615 ORTHO05D000447 4.2e-08 63.2 204 28.9
Sopen05g008790 Solanum pennellii HOM05D000615 ORTHO05D000447 5.5e-08 62.8 204 28.4
SEGI_02840 Sequoiadendron giganteum HOM05D000012 ORTHO05D005107 7.1e-08 62.4 51 60.8
Actinidia15116 Actinidia chinensis HOM05D000615 ORTHO05D000447 9.3e-08 62.0 191 26.2
CAN.G43.22 Capsicum annuum HOM05D000615 ORTHO05D000447 9.3e-08 62.0 211 28.4
Lj3A1062T96 Lonicera japonica HOM05D000615 ORTHO05D000447 9.3e-08 62.0 214 24.8
ECA246G5141 Erigeron canadensis HOM05D000615 ORTHO05D000447 1.2e-07 61.6 193 27.5
Prupe.1G241600 Prunus persica HOM05D000615 ORTHO05D000447 1.2e-07 61.6 245 24.9
RcHm_v2.0_Chr4g0432621 Rosa chinensis HOM05D000615 ORTHO05D000447 1.2e-07 61.6 193 26.4
FvH4_7g07630 Fragaria vesca HOM05D000615 ORTHO05D000447 1.6e-07 61.2 203 23.6
Solyc05g013860.4 Solanum lycopersicum HOM05D000615 ORTHO05D000447 1.6e-07 61.2 204 28.4
FvH4_4g25330 Fragaria vesca HOM05D000615 ORTHO05D000447 2.1e-07 60.8 211 24.6
MD16G1104700 Malus domestica HOM05D000615 ORTHO05D000447 2.1e-07 60.8 196 26.0
Gohir.A03G135700 Gossypium hirsutum HOM05D000615 ORTHO05D000447 2.7e-07 60.5 213 25.8
Gohir.D02G156500 Gossypium hirsutum HOM05D000615 ORTHO05D000447 2.7e-07 60.5 216 25.9
Gorai.005G175300 Gossypium raimondii HOM05D000615 ORTHO05D000447 2.7e-07 60.5 230 24.8
CiPaw.05G178900 Carya illinoinensis HOM05D000615 ORTHO05D000447 3.5e-07 60.1 196 30.6
FAN17G0971 Fragaria x ananassa HOM05D000615 ORTHO05D000447 3.5e-07 60.1 199 25.6
SEGI_03086 Sequoiadendron giganteum HOM05D000074 ORTHO05D002584 3.5e-07 60.1 49 63.3
AL2G26530 Arabidopsis lyrata HOM05D000615 ORTHO05D000447 6.0e-07 59.3 194 27.3
Lalb_Chr08g0230851 Lupinus albus HOM05D000615 ORTHO05D000447 6.0e-07 59.3 232 27.6
FAN22G0970 Fragaria x ananassa HOM05D000615 ORTHO05D000447 7.9e-07 58.9 200 24.5
HanXRQChr17g0540141 Helianthus annuus HOM05D000615 ORTHO05D000447 7.9e-07 58.9 236 25.8
FAN12G1729 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.0e-06 58.5 211 24.2
HPP92_024525 Vanilla planifolia HOM05D000615 ORTHO05D000447 1.0e-06 58.5 246 23.2
VMungo1309G1935 Vigna mungo HOM05D000615 ORTHO05D000447 1.0e-06 58.5 236 27.1
Ca_16113_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 1.3e-06 58.2 244 23.4
Phvul.009G171300 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 1.3e-06 58.2 236 25.8
SEGI_28941 Sequoiadendron giganteum HOM05D000936 ORTHO05D005107 1.3e-06 58.2 87 39.1
Carub.0002s1424 Capsella rubella HOM05D000615 ORTHO05D000447 1.8e-06 57.8 183 26.8
Duzib268G0349 Durio zibethinus HOM05D000615 ORTHO05D000447 1.8e-06 57.8 208 25.0
Lsat_1_v5_gn_3_30081 Lactuca sativa HOM05D000615 ORTHO05D000447 1.8e-06 57.8 195 27.2
MBI10_g30158_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 1.8e-06 57.8 213 23.5
Sabra08G0139400 Salix brachista HOM05D000615 ORTHO05D000447 1.8e-06 57.8 172 26.7
Dinv14747 Davidia involucrata HOM05D000615 ORTHO05D000447 2.3e-06 57.4 194 26.8
FAN07G1396 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.3e-06 57.4 196 24.0
Hund06841 Selenicereus undatus HOM05D000615 ORTHO05D000447 2.3e-06 57.4 196 23.0
AT1G67790 Arabidopsis thaliana HOM05D000615 ORTHO05D000447 3.0e-06 57.0 78 37.2
Rhsim05G0212000 Rhododendron simsii HOM05D000615 ORTHO05D000447 3.0e-06 57.0 207 24.2
SEGI_20323 Sequoiadendron giganteum HOM05D002715 ORTHO05D002996 3.0e-06 57.0 50 60.0
vmacro18300 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 3.0e-06 57.0 235 24.7
Haze_12283 Corylus avellana HOM05D000615 ORTHO05D000447 5.1e-06 56.2 236 27.5
Lj4g0012004 Lotus japonicus HOM05D001244 ORTHO05D000447 5.1e-06 56.2 226 26.1
ATR0199G009 Amborella trichopoda HOM05D000615 ORTHO05D000447 6.7e-06 55.8 95 34.7
Migut.E00218 Erythranthe guttata HOM05D000615 ORTHO05D000447 6.7e-06 55.8 96 31.2
PGR102G3023 Punica granatum HOM05D000615 ORTHO05D000447 6.7e-06 55.8 188 25.5
PSO063G5069 Papaver somniferum HOM05D000615 ORTHO05D000447 8.7e-06 55.5 158 27.8


User provided reference genes

Program Settings