Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 7.9e-97 357.1 175 100.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 2.8e-25 119.4 166 42.2
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.4e-24 117.1 166 38.0
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 3.1e-24 115.9 166 37.3
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 8.9e-24 114.4 165 38.2
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.0e-23 113.2 157 42.0
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 2.0e-23 113.2 166 36.7
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.4e-23 112.5 157 42.0
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 3.4e-23 112.5 162 40.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 3.4e-23 112.5 162 40.1
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.9e-22 109.4 166 38.6
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 6.4e-22 108.2 166 36.7
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 6.4e-22 108.2 165 38.2
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 8.3e-22 107.8 162 38.3
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 8.3e-22 107.8 166 37.3
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.9e-21 106.7 167 39.5
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.2e-21 105.9 167 37.1
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.2e-21 105.9 167 37.1
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 4.1e-21 105.5 167 39.5
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 4.1e-21 105.5 167 39.5
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 5.4e-21 105.1 159 39.6
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 5.4e-21 105.1 166 37.3
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.4e-21 105.1 162 40.1
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.4e-21 105.1 162 40.1
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 7.1e-21 104.8 161 36.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 9.2e-21 104.4 161 38.5
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 9.2e-21 104.4 168 38.1
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.2e-20 104.0 161 35.4
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.6e-20 103.6 161 37.3
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 2.1e-20 103.2 165 37.0
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.7e-20 102.8 166 36.1
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 3.5e-20 102.4 166 35.5
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.5e-20 102.4 147 42.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 4.6e-20 102.1 162 37.7
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 7.8e-20 101.3 158 35.4
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.3e-19 100.5 167 34.1
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.7e-19 100.1 165 36.4
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 3.9e-19 99.0 166 37.3
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 5.1e-19 98.6 160 38.1
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 8.6e-19 97.8 166 34.3
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.1e-18 97.4 159 35.8
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 1.5e-18 97.1 160 35.0
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.5e-18 97.1 159 34.6
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 4.3e-18 95.5 161 37.9
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.6e-18 95.1 161 37.3
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 5.6e-18 95.1 163 35.0
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 7.3e-18 94.7 158 36.1
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 9.5e-18 94.4 156 40.4
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 1.2e-17 94.0 163 36.2
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.2e-17 94.0 161 37.3
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.6e-17 93.6 165 35.8
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 2.8e-17 92.8 158 34.8
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 3.6e-17 92.4 160 37.5
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 3.6e-17 92.4 165 36.4
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.7e-17 92.0 165 34.5
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 8.1e-17 91.3 172 33.7
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.1e-16 90.9 159 33.3
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.1e-16 90.9 165 33.3
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.1e-16 90.9 161 36.6
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.1e-16 90.9 177 33.3
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.4e-16 90.5 162 36.4
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 3.1e-16 89.4 163 35.6
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 3.1e-16 89.4 161 34.2
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.2e-16 88.6 176 32.4
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 5.2e-16 88.6 171 32.7
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 6.8e-16 88.2 157 36.3
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 8.9e-16 87.8 179 34.1
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.2e-15 87.4 175 31.4
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 2.6e-15 86.3 157 35.7
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.4e-15 85.9 173 34.7
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 3.4e-15 85.9 150 36.0
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 7.6e-15 84.7 179 31.3
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.7e-14 83.6 166 35.5
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.2e-14 83.2 172 30.8
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.9e-14 82.8 143 36.4
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.9e-14 82.8 169 31.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 3.7e-14 82.4 179 31.3
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 3.7e-14 82.4 171 31.6
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 3.7e-14 82.4 164 37.2
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 3.7e-14 82.4 163 35.6
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.2e-13 79.3 163 35.6
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 4.1e-13 79.0 163 35.6
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.1e-13 79.0 163 35.6
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 5.4e-13 78.6 160 35.0
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.2e-13 77.8 163 35.0
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.1e-12 76.6 166 36.7
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 1.3e-11 73.9 171 28.7
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.9e-11 72.4 163 33.7
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 4.3e-10 68.9 102 34.3
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 7.3e-10 68.2 150 34.0
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 9.6e-10 67.8 149 31.5
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.2e-09 67.4 138 34.8
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.1e-09 66.6 154 29.9
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 2.1e-09 66.6 156 32.1
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 8.1e-09 64.7 160 31.9
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 2.4e-08 63.2 149 28.9
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 3.1e-08 62.8 160 31.2
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.5e-07 60.5 138 29.7
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.0e-07 60.1 146 30.8
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.6e-07 59.7 160 29.4
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.6e-07 59.7 160 29.4
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 5.8e-07 58.5 160 29.4
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 1.3e-06 57.4 159 29.6
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.3e-06 57.4 159 29.6
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.7e-06 57.0 160 28.8
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 4.9e-06 55.5 122 33.6
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 8.4e-06 54.7 147 29.9


User provided reference genes

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