Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.7e-270 934.9 511 100.0
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.1e-137 493.4 513 55.8
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 4.3e-135 485.7 513 57.7
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.1e-133 481.1 514 53.5
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 5.2e-133 478.8 516 54.3
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 8.4e-131 471.5 519 54.1
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 7.1e-130 468.4 513 52.4
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 7.1e-130 468.4 512 57.0
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 9.3e-130 468.0 523 54.7
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.2e-129 467.6 512 57.6
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 2.7e-129 466.5 510 53.9
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 3.0e-128 463.0 520 53.8
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 5.1e-128 462.2 512 52.5
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 5.1e-128 462.2 530 54.5
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 6.6e-128 461.8 523 50.9
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.9e-127 460.3 511 52.3
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 3.3e-127 459.5 514 51.8
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 4.3e-127 459.1 515 54.2
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 5.6e-127 458.8 512 51.8
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 7.3e-127 458.4 514 51.2
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.1e-126 456.8 514 52.3
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 6.2e-126 455.3 513 52.0
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.1e-125 454.5 514 50.8
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.1e-125 454.5 514 54.1
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.4e-125 454.1 516 50.8
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.4e-125 454.1 515 54.8
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 3.1e-125 453.0 521 52.2
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 3.1e-125 453.0 513 54.0
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 4.0e-125 452.6 521 52.2
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 5.3e-125 452.2 525 55.6
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 6.9e-125 451.8 521 51.1
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.6e-124 449.9 518 51.2
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.6e-124 449.9 518 51.2
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 3.4e-124 449.5 512 52.3
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 3.4e-124 449.5 521 52.8
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 4.5e-124 449.1 522 55.0
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 4.5e-124 449.1 512 51.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 5.8e-124 448.7 512 50.6
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 9.9e-124 448.0 513 55.2
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.3e-123 447.6 514 51.9
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 1.7e-123 447.2 518 53.3
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.7e-123 447.2 516 51.2
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.9e-123 446.4 513 51.3
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 3.8e-123 446.0 517 53.0
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.1e-122 444.5 512 50.6
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.9e-122 443.7 520 53.7
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 2.4e-122 443.4 513 52.2
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.4e-122 443.4 517 54.7
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 4.2e-122 442.6 525 54.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 4.2e-122 442.6 516 51.0
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 4.2e-122 442.6 514 50.4
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.6e-121 440.7 519 50.5
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.6e-121 440.7 527 54.5
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 2.1e-121 440.3 520 49.2
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 4.6e-121 439.1 525 49.3
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 4.6e-121 439.1 511 49.1
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 2.3e-120 436.8 521 53.6
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 3.9e-120 436.0 513 53.4
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 6.7e-120 435.3 559 47.6
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 8.7e-120 434.9 531 54.6
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.3e-118 431.0 513 49.9
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 2.8e-118 429.9 514 49.0
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 8.1e-118 428.3 499 50.9
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.4e-117 427.6 515 50.7
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 4.0e-117 426.0 526 48.1
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 5.3e-117 425.6 513 50.1
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 6.9e-117 425.2 511 52.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 3.4e-116 422.9 527 51.0
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 4.5e-116 422.5 532 50.9
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 2.1e-113 413.7 517 48.5
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.5e-113 412.9 511 53.0
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.0e-112 411.4 517 47.8
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 5.6e-111 405.6 531 46.3
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 8.2e-110 401.7 520 47.5
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.1e-109 401.4 525 48.2
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 3.1e-109 399.8 522 46.6
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 6.9e-109 398.7 520 46.7
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 3.4e-108 396.4 522 46.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 5.8e-108 395.6 521 49.9
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 7.6e-108 395.2 537 46.6
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.3e-107 394.4 551 46.6
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.9e-107 393.3 350 60.0
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 3.8e-107 392.9 522 50.4
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.2e-106 389.8 514 52.5
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 9.3e-106 388.3 536 44.6
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 2.1e-105 387.1 528 44.3
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 2.7e-105 386.7 522 46.6
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 3.5e-105 386.3 522 45.6
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.5e-105 386.3 531 46.5
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.0e-104 383.3 518 45.6
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.1e-103 381.3 524 47.1
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 3.3e-103 379.8 524 46.9
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 2.8e-102 376.7 407 52.1
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 5.1e-96 355.9 513 44.8
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.9e-95 354.0 514 44.9
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.7e-91 340.9 376 57.4
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 6.9e-85 318.9 520 42.1
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 8.8e-80 302.0 372 48.7
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.7e-78 296.6 369 53.1
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 8.0e-73 278.9 346 50.3
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.2e-62 244.2 364 48.1
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 5.9e-60 236.1 593 31.2
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 6.5e-59 232.6 571 34.0
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.8e-57 227.3 194 62.4
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 6.4e-30 136.3 307 35.2
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 5.1e-27 126.7 149 50.3
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 1.2e-25 122.1 198 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.2e-21 107.1 150 41.3
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 7.8e-20 102.8 111 48.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.5e-18 98.6 307 32.6
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 6.2e-09 66.6 254 31.5
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 1.2e-07 62.4 53 56.6
SEGI_18864 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 1.2e-07 62.4 79 44.3
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 1.5e-07 62.0 55 52.7
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.0e-07 61.6 55 52.7
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 3.4e-07 60.8 55 52.7
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 4.5e-07 60.5 66 43.9
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 4.5e-07 60.5 58 48.3
Prupe.7G253700 Prunus persica HOM05D004574 ORTHO05D005612 4.5e-07 60.5 66 45.5
Eucgr.L03484 Eucalyptus grandis HOM05D004574 ORTHO05D005612 5.8e-07 60.1 50 54.0
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 5.8e-07 60.1 55 50.9
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 5.8e-07 60.1 59 47.5
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 5.8e-07 60.1 59 47.5
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 7.6e-07 59.7 59 45.8
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 7.6e-07 59.7 81 42.0
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 7.6e-07 59.7 59 47.5
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 7.6e-07 59.7 59 47.5
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 9.9e-07 59.3 53 50.9
FAN26G2227 Fragaria x ananassa HOM05D004574 ORTHO05D005612 9.9e-07 59.3 53 50.9
FAN28G2389 Fragaria x ananassa HOM05D004574 ORTHO05D005612 9.9e-07 59.3 53 50.9
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 1.3e-06 58.9 46 58.7
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 1.3e-06 58.9 57 49.1
Potri.006G189501 Populus trichocarpa HOM05D004574 ORTHO05D005612 1.3e-06 58.9 48 54.2
RcHm_v2.0_Chr2g0086551 Rosa chinensis HOM05D004574 ORTHO05D005612 1.3e-06 58.9 62 48.4
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 1.7e-06 58.5 86 38.4
Sabra18G0096500 Salix brachista HOM05D004574 ORTHO05D005612 1.7e-06 58.5 58 48.3
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.2e-06 58.2 55 49.1
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.2e-06 58.2 55 49.1
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 2.2e-06 58.2 59 47.5
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 2.2e-06 58.2 55 49.1
SGA_v2.0_scaffold229G43349 Striga asiatica HOM05D004574 ORTHO05D005612 2.2e-06 58.2 73 39.7
Zm00001eb028250 Zea mays HOM05D004574 ORTHO05D005612 2.2e-06 58.2 62 46.8
Cfa020884 Carpinus fangiana HOM05D004574 ORTHO05D005612 2.9e-06 57.8 46 58.7
Haze_19313 Corylus avellana HOM05D004574 ORTHO05D005612 2.9e-06 57.8 55 49.1
TWI34G0786 Tripterygium wilfordii HOM05D004574 ORTHO05D005612 3.8e-06 57.4 46 56.5
Atru.chr7.229_Atru.chr7.228 Acer truncatum HOM05D004574 ORTHO05D005612 4.9e-06 57.0 77 41.6
Migut.J01279 Erythranthe guttata HOM05D004574 ORTHO05D005612 4.9e-06 57.0 86 34.9
FAN23G1466 Fragaria x ananassa HOM05D004574 ORTHO05D005612 4.9e-06 57.0 53 49.1
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 4.9e-06 57.0 65 44.6
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 4.9e-06 57.0 74 40.5
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 6.4e-06 56.6 57 47.4
THA.LOC104815398 Tarenaya hassleriana HOM05D004574 ORTHO05D005612 6.4e-06 56.6 59 45.8
vmacro21880 Vaccinium macrocarpon HOM05D004574 ORTHO05D005612 6.4e-06 56.6 49 53.1
VMungo1215G1939 Vigna mungo HOM05D004574 ORTHO05D005612 6.4e-06 56.6 54 48.1
ECA236G2347 Erigeron canadensis HOM05D004574 ORTHO05D005612 8.4e-06 56.2 55 47.3
Eucgr.L02934 Eucalyptus grandis HOM05D004574 ORTHO05D005612 8.4e-06 56.2 65 44.6
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 8.4e-06 56.2 58 46.6
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 8.4e-06 56.2 73 37.0
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 8.4e-06 56.2 46 56.5
SEGI_02942 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 8.4e-06 56.2 78 39.7
SEGI_39807 Sequoiadendron giganteum HOM05D008617 ORTHO05D010792 8.4e-06 56.2 78 38.5
unitig_0.g517 Utricularia gibba HOM05D004574 ORTHO05D005612 8.4e-06 56.2 54 50.0
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 8.4e-06 56.2 77 39.0


User provided reference genes

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