Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04401 Sequoiadendron giganteum HOM05D003091 ORTHO05D015876 1.8e-81 305.8 150 100.0
SEGI_16507 Sequoiadendron giganteum HOM05D003091 ORTHO05D015876 1.8e-81 305.8 150 100.0
SEGI_08466 Sequoiadendron giganteum HOM05D003091 ORTHO05D015876 6.0e-45 184.5 91 100.0
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 2.5e-22 109.4 58 87.9
Mapoly0108s0004 Marchantia polymorpha HOM05D003091 ORTHO05D015876 6.7e-20 101.3 90 57.8
Mapoly0110s0052 Marchantia polymorpha HOM05D003091 ORTHO05D015876 6.7e-20 101.3 90 57.8
Pp3c3_4970 Physcomitrium patens HOM05D003091 ORTHO05D015876 5.7e-19 98.2 91 60.4
Pp3c4_28860 Physcomitrium patens HOM05D003091 ORTHO05D015876 7.4e-19 97.8 90 54.4
AagrBONN_evm.TU.Sc2ySwM_344.4142 Anthoceros agrestis HOM05D003091 ORTHO05D015876 1.5e-16 90.1 92 55.4
SMO232G0043 Selaginella moellendorffii HOM05D003091 ORTHO05D015876 8.5e-15 84.3 90 46.7
BcaC03g17184 Brassica carinata HOM05D003091 ORTHO05D003671 2.8e-10 69.3 157 32.5
BcaC04g21506 Brassica carinata HOM05D003091 ORTHO05D003671 2.8e-10 69.3 144 34.7
A09p24090 Brassica napus HOM05D003091 ORTHO05D003671 2.8e-10 69.3 144 34.7
C09p30980 Brassica napus HOM05D003091 ORTHO05D003671 2.8e-10 69.3 144 34.7
BolC9t55957H Brassica oleracea HOM05D003091 ORTHO05D003671 2.8e-10 69.3 144 34.7
BcaB07g30686 Brassica carinata HOM05D003091 ORTHO05D003671 8.2e-10 67.8 144 33.3
BcaB07g30310 Brassica carinata HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
BcaC06g31199 Brassica carinata HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
A02p33230 Brassica napus HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
A06p43280 Brassica napus HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
C02p51130 Brassica napus HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
BolC2t11200H Brassica oleracea HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
BraA02t08347Z Brassica rapa HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
BraA06t27214Z Brassica rapa HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 40.0
BraA09t38009Z Brassica rapa HOM05D003091 ORTHO05D003671 1.8e-09 66.6 90 42.2
BcaC06g34018 Brassica carinata HOM05D003091 ORTHO05D003671 2.4e-09 66.2 90 40.0
C07p33670 Brassica napus HOM05D003091 ORTHO05D003671 2.4e-09 66.2 90 40.0
BolC7t43877H Brassica oleracea HOM05D003091 ORTHO05D003671 2.4e-09 66.2 90 40.0
Pp3c3_24000 Physcomitrium patens HOM05D003091 ORTHO05D003671 2.4e-09 66.2 90 40.0
Pp3c3_24020 Physcomitrium patens HOM05D003091 ORTHO05D003671 2.4e-09 66.2 90 40.0
Rhsim13G0211100 Rhododendron simsii HOM05D003091 ORTHO05D003671 3.1e-09 65.9 144 32.6
SMO172G0078 Selaginella moellendorffii HOM05D003091 ORTHO05D003671 3.1e-09 65.9 90 42.2
Thhalv10004551m.g Eutrema salsugineum HOM05D003091 ORTHO05D003671 4.1e-09 65.5 90 40.0
Sp2g14090 Schrenkiella parvula HOM05D003091 ORTHO05D003671 5.3e-09 65.1 90 38.9
CANSAT25G3396 Cannabis sativa HOM05D003091 ORTHO05D003671 1.2e-08 63.9 90 38.9
FAN20G1214 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.2e-08 63.9 153 30.7
Mapoly0057s0081 Marchantia polymorpha HOM05D003091 ORTHO05D003671 1.2e-08 63.9 70 47.1
vmacro04023 Vaccinium macrocarpon HOM05D003091 ORTHO05D003671 1.2e-08 63.9 144 31.2
FAN27G0636 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.5e-08 63.5 153 30.7
CDE02G3432 Ceratophyllum demersum HOM05D003091 ORTHO05D003671 2.0e-08 63.2 90 37.8
PRCOL_00004266 Prasinoderma coloniale HOM05D003091 ORTHO05D003671 2.0e-08 63.2 145 30.3
EL10Ac4g10135 Beta vulgaris HOM05D003091 ORTHO05D003671 2.6e-08 62.8 156 30.8
Gohir.A07G120600 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.6e-08 62.8 70 44.3
Gohir.D07G124800 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.6e-08 62.8 70 44.3
Gorai.001G134600 Gossypium raimondii HOM05D003091 ORTHO05D003671 2.6e-08 62.8 70 44.3
Medtr3g109932 Medicago truncatula HOM05D003091 ORTHO05D003671 2.6e-08 62.8 90 38.9
Medtr3g109968 Medicago truncatula HOM05D003091 ORTHO05D003671 2.6e-08 62.8 90 38.9
Rhsim01G0194700 Rhododendron simsii HOM05D003091 ORTHO05D003671 2.6e-08 62.8 90 38.9
SEGI_37865 Sequoiadendron giganteum HOM05D003091 ORTHO05D003671 2.6e-08 62.8 70 47.1
Aqoxy2G00365 Aquilegia oxysepala HOM05D003091 ORTHO05D003671 3.4e-08 62.4 90 38.9
Aa31LG10G9280 Aethionema arabicum HOM05D003091 ORTHO05D003671 4.5e-08 62.0 90 36.7
CARHR145460 Cardamine hirsuta HOM05D003091 ORTHO05D003671 4.5e-08 62.0 90 36.7
Cc01_g05530 Coffea canephora HOM05D003091 ORTHO05D003671 4.5e-08 62.0 70 45.7
Nn7g36666 Nelumbo nucifera HOM05D003091 ORTHO05D003671 4.5e-08 62.0 70 45.7
Ca_15619_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 5.9e-08 61.6 90 37.8
Gohir.A13G219200 Gossypium hirsutum HOM05D003091 ORTHO05D003671 5.9e-08 61.6 90 37.8
Hma1.2p1_0129F.1_g060120 Hydrangea macrophylla HOM05D003091 ORTHO05D003671 5.9e-08 61.6 90 38.9
Nn2g14838 Nelumbo nucifera HOM05D003091 ORTHO05D003671 5.9e-08 61.6 70 44.3
Oeu025901.1 Olea europaea HOM05D003091 ORTHO05D003671 5.9e-08 61.6 90 37.8
TWI60G1477 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 5.9e-08 61.6 97 36.1
TAR633G0445 Trochodendron aralioides HOM05D003091 ORTHO05D003671 5.9e-08 61.6 70 44.3
GSVIVG01037261001 Vitis vinifera HOM05D003091 ORTHO05D003671 5.9e-08 61.6 70 44.3
ATR0580G276 Amborella trichopoda HOM05D003091 ORTHO05D003671 7.7e-08 61.2 70 42.9
AL5G12770 Arabidopsis lyrata HOM05D003091 ORTHO05D003671 7.7e-08 61.2 90 36.7
AT2G03120 Arabidopsis thaliana HOM05D003091 ORTHO05D003671 7.7e-08 61.2 90 36.7
arahy.Tifrunner.gnm1.ann1.H5V5GF Arachis hypogaea HOM05D003091 ORTHO05D003671 7.7e-08 61.2 97 35.1
CSS0037821 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 7.7e-08 61.2 90 37.8
Carub.0005s0195 Capsella rubella HOM05D003091 ORTHO05D003671 7.7e-08 61.2 90 36.7
Duzib150G1361 Durio zibethinus HOM05D003091 ORTHO05D003671 7.7e-08 61.2 90 37.8
Gohir.D13G222900 Gossypium hirsutum HOM05D003091 ORTHO05D003671 7.7e-08 61.2 70 42.9
Psat6g034320 Pisum sativum HOM05D003091 ORTHO05D003671 7.7e-08 61.2 90 37.8
CSS0031638 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 1.0e-07 60.8 90 37.8
CBR_g39566 Chara braunii HOM05D003091 ORTHO05D003671 1.0e-07 60.8 70 42.9
Gorai.013G254000 Gossypium raimondii HOM05D003091 ORTHO05D003671 1.0e-07 60.8 90 36.7
Lalb_Chr23g0269441 Lupinus albus HOM05D003091 ORTHO05D003671 1.0e-07 60.8 90 37.8
Oeu043280.2 Olea europaea HOM05D003091 ORTHO05D003671 1.0e-07 60.8 97 35.1
THA.LOC104826452 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 1.0e-07 60.8 90 36.7
TWI34G0762 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 1.0e-07 60.8 97 36.1
CAN.G96.11 Capsicum annuum HOM05D003091 ORTHO05D003671 1.3e-07 60.5 90 35.6
DCAR_029992 Daucus carota HOM05D003091 ORTHO05D003671 1.3e-07 60.5 90 36.7
Solyc11g064790.2 Solanum lycopersicum HOM05D003091 ORTHO05D003671 1.3e-07 60.5 90 35.6
Sopen11g024530 Solanum pennellii HOM05D003091 ORTHO05D003671 1.3e-07 60.5 90 35.6
PGSC0003DMG400009454 Solanum tuberosum HOM05D003091 ORTHO05D003671 1.3e-07 60.5 90 35.6
SGA_v2.0_scaffold496G52467 Striga asiatica HOM05D003091 ORTHO05D003671 1.3e-07 60.5 70 44.3
TPR.G1379 Trifolium pratense HOM05D003091 ORTHO05D003671 1.3e-07 60.5 90 36.7
unitig_27.g25006 Utricularia gibba HOM05D003091 ORTHO05D003671 1.3e-07 60.5 69 46.4
Ah.06g194480 Amaranthus hybridus HOM05D000189 ORTHO05D000474 1.7e-07 60.1 70 44.3
EL10Ac4g10152 Beta vulgaris HOM05D003091 ORTHO05D003671 1.7e-07 60.1 90 36.7
CSS0001188 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 1.7e-07 60.1 144 30.6
CSS0007409 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 1.7e-07 60.1 144 30.6
CiPaw.07G207100 Carya illinoinensis HOM05D003091 ORTHO05D003671 1.7e-07 60.1 90 38.9
AUR62000182 Chenopodium quinoa HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 44.3
AUR62006534 Chenopodium quinoa HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 44.3
MELO3C003581.2 Cucumis melo HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 42.9
CsaV3_3G047430 Cucumis sativus L. HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 42.9
Eucgr.J00700 Eucalyptus grandis HOM05D003091 ORTHO05D003671 1.7e-07 60.1 90 36.7
HanXRQChr13g0388471 Helianthus annuus HOM05D003091 ORTHO05D003671 1.7e-07 60.1 90 36.7
Peaxi162Scf00004g04618 Petunia axillaris HOM05D003091 ORTHO05D003671 1.7e-07 60.1 90 35.6
Prupe.1G452500 Prunus persica HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 42.9
THA.LOC104816927 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 1.7e-07 60.1 90 35.6
TAR623G1108 Trochodendron aralioides HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 42.9
HPP92_020481 Vanilla planifolia HOM05D003091 ORTHO05D003671 1.7e-07 60.1 70 44.3
Atru.chr3.2779 Acer truncatum HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 35.6
Actinidia06957 Actinidia chinensis HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 36.7
MSTRG.17631 Avicennia marina HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 35.6
Ca_12810_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 36.7
Glyma.04G080200 Glycine max HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 42.9
Glyma.06G081900 Glycine max HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 42.9
Gohir.A05G071500 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 44.3
Gohir.D05G074400 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 44.3
Gorai.009G075500 Gossypium raimondii HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 44.3
Lj1C287G1 Lonicera japonica HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 36.7
Lalb_Chr08g0243271 Lupinus albus HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 36.7
Manes.02G140400 Manihot esculenta HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 42.9
Phvul.009G106300 Phaseolus vulgaris HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 42.9
Sabra09G0053900 Salix brachista HOM05D003091 ORTHO05D003671 2.2e-07 59.7 70 42.9
SGA_v2.0_scaffold29G12260 Striga asiatica HOM05D003091 ORTHO05D003671 2.2e-07 59.7 90 36.7
ClCG11G014020 Citrullus lanatus HOM05D003091 ORTHO05D003671 2.9e-07 59.3 70 41.4
COL.COLO4_05198 Corchorus olitorius HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 36.7
Haze_21853 Corylus avellana HOM05D003091 ORTHO05D003671 2.9e-07 59.3 70 44.3
DCAR_002102 Daucus carota HOM05D003091 ORTHO05D003671 2.9e-07 59.3 97 34.0
Duzib168G2072 Durio zibethinus HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 36.7
Duzib170G0109 Durio zibethinus HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 36.7
Migut.D00654 Erythranthe guttata HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 36.7
Nitab4.5_0000730g0130 Nicotiana tabacum HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 35.6
Nitab4.5_0001500g0090 Nicotiana tabacum HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 35.6
Os02g0117400 Oryza sativa ssp. japonica HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 36.7
Sed0002878 Sechium edule HOM05D003091 ORTHO05D003671 2.9e-07 59.3 70 41.4
Thecc.09G249800 Theobroma cacao HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 36.7
Zm00001eb209380 Zea mays HOM05D003091 ORTHO05D003671 2.9e-07 59.3 90 35.6
arahy.Tifrunner.gnm1.ann1.0Z0DIR Arachis hypogaea HOM05D003091 ORTHO05D003671 3.8e-07 58.9 90 36.7
Cfa013345 Carpinus fangiana HOM05D003091 ORTHO05D003671 3.8e-07 58.9 70 42.9
Cre14.g617300 Chlamydomonas reinhardtii HOM05D003091 ORTHO05D015876 3.8e-07 58.9 86 39.5
Dinv36179 Davidia involucrata HOM05D003091 ORTHO05D003671 3.8e-07 58.9 90 36.7
Glyma.14G142100 Glycine max HOM05D003091 ORTHO05D003671 3.8e-07 58.9 90 36.7
MD08G1118300 Malus domestica HOM05D003091 ORTHO05D003671 3.8e-07 58.9 90 36.7
MD15G1097600 Malus domestica HOM05D003091 ORTHO05D003671 3.8e-07 58.9 90 36.7
PGR054G0002 Punica granatum HOM05D003091 ORTHO05D003671 3.8e-07 58.9 70 44.3
PGR119G0724 Punica granatum HOM05D003091 ORTHO05D003671 3.8e-07 58.9 70 44.3
Sc16g0011120 Simmondsia chinensis HOM05D003091 ORTHO05D003671 3.8e-07 58.9 90 35.6
arahy.Tifrunner.gnm1.ann1.Y550S7 Arachis hypogaea HOM05D003091 ORTHO05D003671 5.0e-07 58.5 90 36.7
CiPaw.08G023500 Carya illinoinensis HOM05D003091 ORTHO05D003671 5.0e-07 58.5 90 38.9
Migut.N02369 Erythranthe guttata HOM05D003091 ORTHO05D003671 5.0e-07 58.5 70 42.9
Potri.001G276700 Populus trichocarpa HOM05D003091 ORTHO05D003671 5.0e-07 58.5 70 42.9
RcHm_v2.0_Chr6g0305761 Rosa chinensis HOM05D003091 ORTHO05D003671 5.0e-07 58.5 90 36.7
Sed0016432 Sechium edule HOM05D003091 ORTHO05D003671 5.0e-07 58.5 70 41.4
TPR.G12114 Trifolium pratense HOM05D003091 ORTHO05D003671 5.0e-07 58.5 70 41.4
Actinidia23988 Actinidia chinensis HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 42.9
Ciclev10015833m.g Citrus clementina HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 42.9
Lsat_1_v5_gn_9_48160 Lactuca sativa HOM05D003091 ORTHO05D003671 6.5e-07 58.2 90 35.6
MBI13_g30131_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 42.9
Manes.01G179800 Manihot esculenta HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 42.9
PSO339G4627 Papaver somniferum HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 41.4
PSO384G1550 Papaver somniferum HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 41.4
PRCOL_00004103 Prasinoderma coloniale HOM05D003091 ORTHO05D015876 6.5e-07 58.2 51 52.9
Hund07443 Selenicereus undatus HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 42.9
TAR369G0586 Trochodendron aralioides HOM05D003091 ORTHO05D003671 6.5e-07 58.2 90 35.6
VMungo1309G1449 Vigna mungo HOM05D003091 ORTHO05D003671 6.5e-07 58.2 70 41.4
EL10Ac4g10159 Beta vulgaris HOM05D001013 ORTHO05D004597 8.5e-07 57.8 57 45.6
Medtr1g008280 Medicago truncatula HOM05D003091 ORTHO05D003671 8.5e-07 57.8 90 35.6
Solyc01g008820.3 Solanum lycopersicum HOM05D003091 ORTHO05D003671 8.5e-07 57.8 70 41.4
Sopen01g004330 Solanum pennellii HOM05D003091 ORTHO05D003671 8.5e-07 57.8 70 41.4
Lj1g0011096 Lotus japonicus HOM05D003091 ORTHO05D003671 1.1e-06 57.4 70 41.4
PGSC0003DMG400022714 Solanum tuberosum HOM05D003091 ORTHO05D003671 1.1e-06 57.4 70 41.4
Psat0s3378g0040 Pisum sativum HOM05D003091 ORTHO05D003671 1.4e-06 57.0 90 35.6
Hund21985 Selenicereus undatus HOM05D003091 ORTHO05D003671 1.4e-06 57.0 70 41.4
CAN.G917.5 Capsicum annuum HOM05D003091 ORTHO05D003671 1.9e-06 56.6 70 40.0
Haze_26116 Corylus avellana HOM05D003091 ORTHO05D003671 1.9e-06 56.6 96 33.3
ECA232G2856 Erigeron canadensis HOM05D003091 ORTHO05D003671 1.9e-06 56.6 90 33.3
FvH4_2g36110 Fragaria vesca HOM05D003091 ORTHO05D003671 1.9e-06 56.6 70 41.4
FAN15G0484 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.9e-06 56.6 70 41.4
Nitab4.5_0000718g0270 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.9e-06 56.6 70 40.0
Nitab4.5_0005212g0030 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.9e-06 56.6 70 40.0
Peaxi162Scf00032g02617 Petunia axillaris HOM05D003091 ORTHO05D003671 1.9e-06 56.6 70 40.0
Potri.009G071600 Populus trichocarpa HOM05D003091 ORTHO05D003671 1.9e-06 56.6 90 34.4
Lsat_1_v5_gn_8_26901 Lactuca sativa HOM05D003091 ORTHO05D003671 2.5e-06 56.2 90 35.6
Cre07.g332550 Chlamydomonas reinhardtii HOM05D003091 ORTHO05D003671 3.2e-06 55.8 70 38.6
ECA233G4335 Erigeron canadensis HOM05D003091 ORTHO05D003671 4.2e-06 55.5 71 42.3
HanXRQChr08g0216751 Helianthus annuus HOM05D003091 ORTHO05D003671 4.2e-06 55.5 70 41.4


User provided reference genes

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