Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04283 Sequoiadendron giganteum HOM05D000458 ORTHO05D006027 2.6e-110 402.1 214 100.0
SEGI_34787 Sequoiadendron giganteum HOM05D000458 ORTHO05D006027 2.3e-90 335.9 180 100.0
Mapoly0102s0039 Marchantia polymorpha HOM05D000458 ORTHO05D006027 7.5e-65 251.1 153 83.0
ATR0712G038 Amborella trichopoda HOM05D000458 ORTHO05D006027 7.0e-55 218.0 200 60.5
AagrBONN_evm.TU.Sc2ySwM_368.246 Anthoceros agrestis HOM05D000458 ORTHO05D006027 2.2e-53 213.0 152 73.7
SMO134G0223 Selaginella moellendorffii HOM05D000458 ORTHO05D006027 9.4e-52 207.6 174 63.8
Pp3c11_21850 Physcomitrium patens HOM05D000458 ORTHO05D006027 1.2e-51 207.2 167 66.5
Thecc.02G328300 Theobroma cacao HOM05D000458 ORTHO05D006027 4.7e-51 205.3 180 63.3
COL.COLO4_27862 Corchorus olitorius HOM05D000458 ORTHO05D006027 3.0e-50 202.6 171 64.3
CiPaw.05G124100 Carya illinoinensis HOM05D000458 ORTHO05D006027 4.0e-50 202.2 175 64.6
MD13G1060400 Malus domestica HOM05D000458 ORTHO05D006027 4.0e-50 202.2 157 69.4
ClCG11G011620 Citrullus lanatus HOM05D000458 ORTHO05D006027 6.8e-50 201.4 171 64.9
Prupe.1G289000 Prunus persica HOM05D000458 ORTHO05D006027 1.2e-49 200.7 211 56.4
Medtr5g045190 Medicago truncatula HOM05D000458 ORTHO05D006027 2.0e-49 199.9 164 66.5
Glyma.02G119700 Glycine max HOM05D000458 ORTHO05D006027 2.6e-49 199.5 159 66.0
ClCG07G007040 Citrullus lanatus HOM05D000458 ORTHO05D006027 5.7e-49 198.4 172 64.5
Duzib248G0993 Durio zibethinus HOM05D000458 ORTHO05D006027 7.5e-49 198.0 164 64.6
MD16G1059600 Malus domestica HOM05D000458 ORTHO05D006027 7.5e-49 198.0 157 68.2
Lj2g0022401 Lotus japonicus HOM05D000458 ORTHO05D006027 1.7e-48 196.8 152 71.1
Atru.BG.279.p Acer truncatum HOM05D000458 ORTHO05D006027 2.2e-48 196.4 165 62.4
Lalb_Chr04g0255591 Lupinus albus HOM05D000458 ORTHO05D006027 2.2e-48 196.4 164 66.5
Sed0001565 Sechium edule HOM05D000458 ORTHO05D006027 2.2e-48 196.4 162 67.3
Haze_11893 Corylus avellana HOM05D000458 ORTHO05D006027 3.7e-48 195.7 152 69.1
Aa31sc367G80 Aethionema arabicum HOM05D000458 ORTHO05D006027 4.9e-48 195.3 154 68.2
Potri.010G157400 Populus trichocarpa HOM05D000458 ORTHO05D006027 4.9e-48 195.3 152 70.4
CsaV3_5G015170 Cucumis sativus L. HOM05D000458 ORTHO05D006027 6.3e-48 194.9 162 66.7
FvH4_4g29800 Fragaria vesca HOM05D000458 ORTHO05D006027 8.3e-48 194.5 167 65.3
Gohir.A03G105000 Gossypium hirsutum HOM05D000458 ORTHO05D006027 8.3e-48 194.5 176 63.1
RcHm_v2.0_Chr4g0438031 Rosa chinensis HOM05D000458 ORTHO05D006027 8.3e-48 194.5 153 68.6
Eucgr.G02433 Eucalyptus grandis HOM05D000458 ORTHO05D006027 1.1e-47 194.1 169 62.1
FAN07G2301 Fragaria x ananassa HOM05D000458 ORTHO05D006027 1.1e-47 194.1 167 65.9
FAN22G1313 Fragaria x ananassa HOM05D000458 ORTHO05D006027 1.1e-47 194.1 167 65.3
TWI75G1410 Tripterygium wilfordii HOM05D000458 ORTHO05D006027 1.1e-47 194.1 213 52.1
Gohir.A12G160300 Gossypium hirsutum HOM05D000458 ORTHO05D006027 2.4e-47 193.0 174 61.5
Nn3g17488 Nelumbo nucifera HOM05D000458 ORTHO05D006027 2.4e-47 193.0 176 61.4
Phvul.003G041000 Phaseolus vulgaris HOM05D000458 ORTHO05D006027 2.4e-47 193.0 159 63.5
Glyma.01G061500 Glycine max HOM05D000458 ORTHO05D006027 3.1e-47 192.6 159 65.4
Gorai.005G146200 Gossypium raimondii HOM05D000458 ORTHO05D006027 3.1e-47 192.6 176 62.5
THA.LOC104801732 Tarenaya hassleriana HOM05D000458 ORTHO05D006027 3.1e-47 192.6 175 62.3
Ca_04994_v3 Cicer arietinum L. HOM05D000458 ORTHO05D006027 4.1e-47 192.2 152 68.4
QL03p073857 Quercus lobata HOM05D000458 ORTHO05D006027 4.1e-47 192.2 155 69.0
Hma1.2p1_0566F.1_g179900 Hydrangea macrophylla HOM05D000458 ORTHO05D006027 5.4e-47 191.8 163 63.8
AT1G69220 Arabidopsis thaliana HOM05D000458 ORTHO05D006027 7.0e-47 191.4 192 58.3
AL2G28310 Arabidopsis lyrata HOM05D000458 ORTHO05D006027 9.2e-47 191.0 154 67.5
Carub.0002s1581 Capsella rubella HOM05D000458 ORTHO05D006027 9.2e-47 191.0 154 67.5
CARHR062100 Cardamine hirsuta HOM05D000458 ORTHO05D006027 9.2e-47 191.0 164 63.4
PGR119G1610 Punica granatum HOM05D000458 ORTHO05D006027 9.2e-47 191.0 155 65.8
Hund25167 Selenicereus undatus HOM05D000458 ORTHO05D006027 1.2e-46 190.7 146 68.5
Ciclev10030733m.g Citrus clementina HOM05D000458 ORTHO05D006027 1.6e-46 190.3 217 53.0
Gohir.D12G163700 Gossypium hirsutum HOM05D000458 ORTHO05D006027 1.6e-46 190.3 174 60.9
Manes.05G112600 Manihot esculenta HOM05D000458 ORTHO05D006027 1.6e-46 190.3 166 65.1
Sp5g24270 Schrenkiella parvula HOM05D000458 ORTHO05D006027 1.6e-46 190.3 164 62.2
Aqoxy3G03651 Aquilegia oxysepala HOM05D000458 ORTHO05D006027 3.5e-46 189.1 156 66.0
FAN17G2936 Fragaria x ananassa HOM05D000458 ORTHO05D006027 4.5e-46 188.7 167 64.1
C06p40690 Brassica napus HOM05D000458 ORTHO05D006027 5.9e-46 188.3 159 64.8
A02p15720 Brassica napus HOM05D000458 ORTHO05D006027 1.0e-45 187.6 154 66.2
C02p26170 Brassica napus HOM05D000458 ORTHO05D006027 1.0e-45 187.6 154 66.2
BolC2t08683H Brassica oleracea HOM05D000458 ORTHO05D006027 1.0e-45 187.6 154 66.2
BolC6t39363H Brassica oleracea HOM05D000458 ORTHO05D006027 1.0e-45 187.6 154 66.2
BraA02t06633Z Brassica rapa HOM05D000458 ORTHO05D006027 1.0e-45 187.6 154 66.2
Thhalv10018124m.g Eutrema salsugineum HOM05D000458 ORTHO05D006027 1.0e-45 187.6 154 66.2
AUR62003086 Chenopodium quinoa HOM05D000458 ORTHO05D006027 1.3e-45 187.2 153 65.4
EL10Ac6g15014 Beta vulgaris HOM05D000458 ORTHO05D006027 2.3e-45 186.4 146 68.5
TPR.G11376 Trifolium pratense HOM05D000458 ORTHO05D006027 2.9e-45 186.0 135 69.6
BcaC08g46374 Brassica carinata HOM05D000458 ORTHO05D006027 3.8e-45 185.7 154 65.6
AUR62007903 Chenopodium quinoa HOM05D000458 ORTHO05D006027 3.8e-45 185.7 152 65.1
GSVIVG01012233001 Vitis vinifera HOM05D000458 ORTHO05D006027 3.8e-45 185.7 164 62.8
Sc04g0007520 Simmondsia chinensis HOM05D000458 ORTHO05D006027 5.0e-45 185.3 155 64.5
MSTRG.7737 Avicennia marina HOM05D000458 ORTHO05D006027 8.6e-45 184.5 149 67.1
Cc11_g11850 Coffea canephora HOM05D000458 ORTHO05D006027 1.5e-44 183.7 175 60.6
Cfa008866 Carpinus fangiana HOM05D000458 ORTHO05D006027 1.9e-44 183.3 152 66.4
Peaxi162Scf00175g00431 Petunia axillaris HOM05D000458 ORTHO05D006027 1.9e-44 183.3 152 67.1
Ah.03g138830 Amaranthus hybridus HOM05D000458 ORTHO05D006027 2.5e-44 183.0 146 66.4
Migut.L01178 Erythranthe guttata HOM05D000458 ORTHO05D006027 2.5e-44 183.0 166 62.7
Nitab4.5_0007734g0050 Nicotiana tabacum HOM05D000458 ORTHO05D006027 2.5e-44 183.0 153 66.7
THA.LOC104822005 Tarenaya hassleriana HOM05D000458 ORTHO05D006027 2.5e-44 183.0 147 66.7
Oeu055097.3 Olea europaea HOM05D000458 ORTHO05D006027 3.3e-44 182.6 156 65.4
Dinv16741 Davidia involucrata HOM05D000458 ORTHO05D006027 5.6e-44 181.8 151 66.9
ECA233G3497 Erigeron canadensis HOM05D000458 ORTHO05D006027 7.3e-44 181.4 156 63.5
A07p35550 Brassica napus HOM05D000458 ORTHO05D006027 9.5e-44 181.0 154 64.9
Sopen05g006920 Solanum pennellii HOM05D000458 ORTHO05D006027 9.5e-44 181.0 181 60.2
Os03g0755000 Oryza sativa ssp. japonica HOM05D000458 ORTHO05D006027 1.6e-43 180.3 174 57.5
vmacro10434 Vaccinium macrocarpon HOM05D000458 ORTHO05D006027 1.6e-43 180.3 164 65.2
Zm00001eb057640 Zea mays HOM05D000458 ORTHO05D006027 1.6e-43 180.3 165 60.6
Actinidia16155 Actinidia chinensis HOM05D000458 ORTHO05D006027 2.1e-43 179.9 146 68.5
PSO478G4292 Papaver somniferum HOM05D000458 ORTHO05D006027 2.8e-43 179.5 163 63.2
Gohir.D02G130200 Gossypium hirsutum HOM05D000458 ORTHO05D006027 3.6e-43 179.1 165 61.2
SalBow2G3304 Salvia bowleyana HOM05D000458 ORTHO05D006027 3.6e-43 179.1 157 64.3
DCAR_007200 Daucus carota HOM05D000458 ORTHO05D006027 4.7e-43 178.7 170 63.5
HanXRQChr12g0363161 Helianthus annuus HOM05D000458 ORTHO05D006027 6.1e-43 178.3 211 51.2
Lj6A777T46 Lonicera japonica HOM05D000458 ORTHO05D006027 1.8e-42 176.8 152 66.4
PSO017G2361 Papaver somniferum HOM05D000458 ORTHO05D006027 3.0e-42 176.0 163 62.6
SGA_v2.0_scaffold36G14468 Striga asiatica HOM05D000458 ORTHO05D006027 2.0e-41 173.3 146 66.4
BcaB03g15880 Brassica carinata HOM05D000458 ORTHO05D006027 3.4e-41 172.6 149 62.4
unitig_8.g3452 Utricularia gibba HOM05D000458 ORTHO05D006027 3.4e-41 172.6 164 59.8
CAN.G707.17 Capsicum annuum HOM05D000458 ORTHO05D006027 5.7e-41 171.8 179 56.4
BcaC03g15062 Brassica carinata HOM05D003222 ORTHO05D006027 7.5e-41 171.4 143 64.3
Lsat_1_v5_gn_8_46480 Lactuca sativa HOM05D000458 ORTHO05D006027 7.5e-41 171.4 208 50.0
HPP92_019203 Vanilla planifolia HOM05D000458 ORTHO05D006027 7.5e-41 171.4 155 58.7
arahy.Tifrunner.gnm1.ann1.ALPQ20 Arachis hypogaea HOM05D000458 ORTHO05D006027 1.7e-40 170.2 220 50.0
BcaB03g15882 Brassica carinata HOM05D000458 ORTHO05D006027 2.9e-40 169.5 143 63.6
BraA07t31143Z Brassica rapa HOM05D000458 ORTHO05D006027 3.7e-40 169.1 143 63.6
CBR_g2836 Chara braunii HOM05D000458 ORTHO05D006027 1.4e-39 167.2 170 55.3
Nitab4.5_0000231g0080 Nicotiana tabacum HOM05D000458 ORTHO05D006027 4.6e-38 162.2 152 60.5
TAR385G0004 Trochodendron aralioides HOM05D000458 ORTHO05D006027 1.0e-37 161.0 148 61.5
SHI29150 Sapria himalayana HOM05D000458 ORTHO05D006027 1.7e-37 160.2 144 61.8
Oeu028264.3 Olea europaea HOM05D000458 ORTHO05D006027 6.6e-37 158.3 124 67.7
FAN12G2330 Fragaria x ananassa HOM05D000458 ORTHO05D006027 1.6e-35 153.7 276 39.9
Sabra10G0119400 Salix brachista HOM05D003222 ORTHO05D006027 2.6e-33 146.4 119 68.1
Psat2g132400 Pisum sativum HOM05D000458 ORTHO05D006027 2.2e-32 143.3 126 60.3
Actinidia28648 Actinidia chinensis HOM05D000458 ORTHO05D006027 4.3e-28 129.0 113 63.7
vmacro20925 Vaccinium macrocarpon HOM05D003222 ORTHO05D003706 6.8e-26 121.7 103 67.0
Rhsim09G0126200 Rhododendron simsii HOM05D003222 ORTHO05D006027 7.1e-23 111.7 158 46.8
Gorai.008G176300 Gossypium raimondii HOM05D000458 ORTHO05D006027 2.5e-20 103.2 114 50.0
Duzib268G0033 Durio zibethinus HOM05D000458 ORTHO05D006027 1.7e-13 80.5 52 73.1
Cpa.g.sc1.148 Carica papaya HOM05D000458 ORTHO05D006027 1.9e-12 77.0 63 63.5
BcaC08g46373 Brassica carinata HOM05D000458 ORTHO05D006027 7.3e-12 75.1 54 64.8
GSVIVG01009999001 Vitis vinifera HOM05D000458 ORTHO05D006027 2.0e-09 67.0 53 66.0
MELO3C003993.2 Cucumis melo HOM05D000458 ORTHO05D006027 2.6e-09 66.6 61 59.0
DCAR_007966 Daucus carota HOM05D000458 ORTHO05D006027 2.4e-07 60.1 33 84.8


User provided reference genes

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