Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04059 Sequoiadendron giganteum HOM05D001772 ORTHO05D005958 4.7e-85 318.2 201 100.0
Nitab4.5_0011592g0020 Nicotiana tabacum HOM05D001772 ORTHO05D005958 9.2e-33 144.4 196 48.0
Eucgr.E00068 Eucalyptus grandis HOM05D001772 ORTHO05D005958 3.0e-31 139.4 201 50.2
arahy.Tifrunner.gnm1.ann1.G8BSRK Arachis hypogaea HOM05D001772 ORTHO05D005958 1.5e-30 137.1 199 47.2
Nn3g19052 Nelumbo nucifera HOM05D001772 ORTHO05D005958 7.3e-30 134.8 198 46.5
PGR042G0802 Punica granatum HOM05D001772 ORTHO05D005958 1.2e-29 134.0 193 51.8
Nn1g01834 Nelumbo nucifera HOM05D001772 ORTHO05D005958 2.1e-29 133.3 200 48.0
arahy.Tifrunner.gnm1.ann1.F3DNBB Arachis hypogaea HOM05D001772 ORTHO05D005958 2.8e-29 132.9 191 48.2
Manes.01G247500 Manihot esculenta HOM05D001772 ORTHO05D005958 2.8e-29 132.9 191 49.7
TAR375G0592 Trochodendron aralioides HOM05D001772 ORTHO05D005958 4.7e-29 132.1 192 49.0
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 6.2e-29 131.7 192 46.9
Lj3g0001091 Lotus japonicus HOM05D001772 ORTHO05D005958 1.1e-28 131.0 205 51.2
CDE03G0069 Ceratophyllum demersum HOM05D001772 ORTHO05D005958 1.4e-28 130.6 198 50.0
Aqoxy5G04175 Aquilegia oxysepala HOM05D001772 ORTHO05D005958 3.1e-28 129.4 190 48.4
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 4.0e-28 129.0 184 48.4
SMO111G0042 Selaginella moellendorffii HOM05D001772 ORTHO05D005958 4.0e-28 129.0 193 46.1
TAR636G2875 Trochodendron aralioides HOM05D001772 ORTHO05D005958 4.0e-28 129.0 194 47.9
Gorai.008G124200 Gossypium raimondii HOM05D001772 ORTHO05D005958 5.2e-28 128.6 197 44.2
Gohir.A12G111400 Gossypium hirsutum HOM05D001772 ORTHO05D005958 6.8e-28 128.3 197 44.2
Hund16701 Selenicereus undatus HOM05D001772 ORTHO05D005958 8.9e-28 127.9 202 46.5
Solyc01g095670.4 Solanum lycopersicum HOM05D001772 ORTHO05D005958 1.2e-27 127.5 185 47.0
Sopen01g039410 Solanum pennellii HOM05D001772 ORTHO05D005958 1.2e-27 127.5 185 47.0
Gohir.D12G114700 Gossypium hirsutum HOM05D001772 ORTHO05D005958 1.5e-27 127.1 197 43.7
CSS0019350 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D005958 2.6e-27 126.3 188 45.7
Lalb_Chr10g0100391 Lupinus albus HOM05D001772 ORTHO05D005958 2.6e-27 126.3 213 48.4
Prupe.2G185500 Prunus persica HOM05D001772 ORTHO05D005958 3.4e-27 125.9 182 46.7
Glyma.07G057200 Glycine max HOM05D001772 ORTHO05D005958 5.8e-27 125.2 196 47.4
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 7.6e-27 124.8 200 46.5
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 9.9e-27 124.4 200 46.0
Oeu043209.1 Olea europaea HOM05D001772 ORTHO05D005958 9.9e-27 124.4 191 52.9
Lalb_Chr17g0342481 Lupinus albus HOM05D001772 ORTHO05D005958 1.3e-26 124.0 207 48.3
Peaxi162Scf00786g00450 Petunia axillaris HOM05D001772 ORTHO05D005958 1.3e-26 124.0 185 46.5
CAN.G986.28 Capsicum annuum HOM05D001772 ORTHO05D005958 1.7e-26 123.6 184 46.7
CsaV3_3G008160 Cucumis sativus L. HOM05D001772 ORTHO05D005958 2.2e-26 123.2 195 50.8
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.2e-26 123.2 189 48.7
Phvul.010G112100 Phaseolus vulgaris HOM05D001772 ORTHO05D005958 2.2e-26 123.2 198 49.0
FvH4_7g16190 Fragaria vesca HOM05D001772 ORTHO05D005958 2.9e-26 122.9 189 48.7
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.9e-26 122.9 189 48.7
Glyma.16G026200 Glycine max HOM05D001772 ORTHO05D005958 2.9e-26 122.9 192 52.1
MD07G1147500 Malus domestica HOM05D001772 ORTHO05D005958 2.9e-26 122.9 190 46.3
VMungo0331G1517 Vigna mungo HOM05D001772 ORTHO05D005958 2.9e-26 122.9 198 46.0
Potri.014G096500 Populus trichocarpa HOM05D001772 ORTHO05D005958 3.8e-26 122.5 189 50.8
CiPaw.01G074300 Carya illinoinensis HOM05D001772 ORTHO05D005958 4.9e-26 122.1 186 47.3
Psat4g160440 Pisum sativum HOM05D001772 ORTHO05D005958 4.9e-26 122.1 219 42.5
AL6G52330 Arabidopsis lyrata HOM05D001772 ORTHO05D005958 6.4e-26 121.7 197 45.2
Duzib138G1424 Durio zibethinus HOM05D001772 ORTHO05D005958 6.4e-26 121.7 193 45.1
Cc02_g39150 Coffea canephora HOM05D001772 ORTHO05D005958 1.4e-25 120.6 184 43.5
SGA_v2.0_scaffold43G16374 Striga asiatica HOM05D001772 ORTHO05D005958 1.4e-25 120.6 194 42.8
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 1.9e-25 120.2 190 43.2
Ciclev10020161m.g Citrus clementina HOM05D001772 ORTHO05D005958 2.4e-25 119.8 195 46.2
Gohir.D08G147000 Gossypium hirsutum HOM05D001772 ORTHO05D005958 2.4e-25 119.8 224 39.7
AT4G01050 Arabidopsis thaliana HOM05D001772 ORTHO05D005958 3.2e-25 119.4 208 48.6
arahy.Tifrunner.gnm1.ann1.DXZ71K Arachis hypogaea HOM05D001772 ORTHO05D005958 3.2e-25 119.4 240 39.6
Medtr8g027835 Medicago truncatula HOM05D001772 ORTHO05D005958 3.2e-25 119.4 201 52.7
Gorai.004G152500 Gossypium raimondii HOM05D001772 ORTHO05D005958 5.4e-25 118.6 223 39.5
BcaC04g24121 Brassica carinata HOM05D001772 ORTHO05D005958 7.1e-25 118.2 200 43.0
COL.COLO4_06308 Corchorus olitorius HOM05D001772 ORTHO05D005958 9.2e-25 117.9 219 47.9
Gohir.A08G125900 Gossypium hirsutum HOM05D001772 ORTHO05D005958 1.2e-24 117.5 215 40.9
Aqoxy7G00134 Aquilegia oxysepala HOM05D001772 ORTHO05D005958 1.6e-24 117.1 193 44.0
Actinidia28128 Actinidia chinensis HOM05D001772 ORTHO05D005958 2.7e-24 116.3 90 71.1
arahy.Tifrunner.gnm1.ann1.8C9R1J Arachis hypogaea HOM05D001772 ORTHO05D005958 2.7e-24 116.3 207 41.5
Haze_15634 Corylus avellana HOM05D001772 ORTHO05D005958 2.7e-24 116.3 198 45.5
MELO3C006035.2 Cucumis melo HOM05D001772 ORTHO05D005958 3.5e-24 115.9 195 44.1
Thhalv10028649m.g Eutrema salsugineum HOM05D001772 ORTHO05D005958 3.5e-24 115.9 195 53.3
SalBow3G4655 Salvia bowleyana HOM05D001772 ORTHO05D005958 3.5e-24 115.9 186 41.9
Zm00001eb238170 Zea mays HOM05D001772 ORTHO05D005958 3.5e-24 115.9 221 43.9
CARHR249260 Cardamine hirsuta HOM05D001772 ORTHO05D005958 4.6e-24 115.5 200 45.0
Thecc.01G345000 Theobroma cacao HOM05D001772 ORTHO05D005958 6.0e-24 115.2 181 42.5
A09p00240 Brassica napus HOM05D001772 ORTHO05D005958 7.8e-24 114.8 198 46.0
BolC9t53021H Brassica oleracea HOM05D001772 ORTHO05D005958 7.8e-24 114.8 184 51.1
BraA09t35751Z Brassica rapa HOM05D001772 ORTHO05D005958 7.8e-24 114.8 198 46.0
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 7.8e-24 114.8 189 47.1
TPR.G7664 Trifolium pratense HOM05D001772 ORTHO05D005958 7.8e-24 114.8 192 56.2
ATR0589G056 Amborella trichopoda HOM05D001772 ORTHO05D005958 1.0e-23 114.4 108 63.0
TWI23G1206 Tripterygium wilfordii HOM05D001772 ORTHO05D005958 1.3e-23 114.0 188 44.1
Nitab4.5_0000838g0040 Nicotiana tabacum HOM05D001772 ORTHO05D005958 1.7e-23 113.6 184 45.7
Os02g0257300 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D005958 1.7e-23 113.6 183 45.9
Ca_26358_v3 Cicer arietinum L. HOM05D001772 ORTHO05D005958 2.3e-23 113.2 190 44.2
Carub.0006s3611 Capsella rubella HOM05D001772 ORTHO05D005958 3.0e-23 112.8 214 43.9
unitig_8.g4994 Utricularia gibba HOM05D000331 ORTHO05D005958 3.0e-23 112.8 191 42.4
HPP92_008635 Vanilla planifolia HOM05D001772 ORTHO05D005958 3.0e-23 112.8 190 42.6
C09p00870 Brassica napus HOM05D001772 ORTHO05D005958 3.9e-23 112.5 187 54.0
BcaC01g06840 Brassica carinata HOM05D001772 ORTHO05D005958 5.1e-23 112.1 201 39.8
BcaC04g24115 Brassica carinata HOM05D001772 ORTHO05D005958 5.1e-23 112.1 198 48.5
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 5.1e-23 112.1 201 39.8
Potri.002G169100 Populus trichocarpa HOM05D001772 ORTHO05D005958 5.1e-23 112.1 189 44.4
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.6e-23 111.7 190 47.4
Mapoly0027s0106 Marchantia polymorpha HOM05D001772 ORTHO05D005958 6.6e-23 111.7 238 42.0
DCAR_008656 Daucus carota HOM05D001772 ORTHO05D005958 8.7e-23 111.3 183 46.4
Actinidia20227 Actinidia chinensis HOM05D001772 ORTHO05D005958 1.1e-22 110.9 181 42.0
FAN10G1004 Fragaria x ananassa HOM05D001772 ORTHO05D005958 1.1e-22 110.9 193 50.3
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.1e-22 110.9 193 50.3
HanXRQChr11g0353041 Helianthus annuus HOM05D001772 ORTHO05D005958 1.1e-22 110.9 182 44.0
Hma1.2p1_0077F.1_g039660 Hydrangea macrophylla HOM05D001772 ORTHO05D005958 1.1e-22 110.9 205 40.0
AUR62023482 Chenopodium quinoa HOM05D001772 ORTHO05D005958 1.5e-22 110.5 195 50.3
TAR374G0181 Trochodendron aralioides HOM05D001772 ORTHO05D005958 1.5e-22 110.5 173 45.1
TAR374G0629 Trochodendron aralioides HOM05D001772 ORTHO05D005958 1.5e-22 110.5 173 45.1
BcaB01g02344 Brassica carinata HOM05D001772 ORTHO05D005958 1.9e-22 110.2 193 50.8
SGA_v2.0_scaffold5G03005 Striga asiatica HOM05D001772 ORTHO05D005958 1.9e-22 110.2 194 43.3
Cpa.g.sc490.2 Carica papaya HOM05D001772 ORTHO05D005958 5.6e-22 108.6 212 39.6
RcHm_v2.0_Chr1g0359191 Rosa chinensis HOM05D001772 ORTHO05D005958 5.6e-22 108.6 190 43.2
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 7.3e-22 108.2 193 47.7
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 7.3e-22 108.2 193 47.7
Nitab4.5_0000360g0010 Nicotiana tabacum HOM05D001772 ORTHO05D005958 7.3e-22 108.2 194 42.3
PSO170G2207 Papaver somniferum HOM05D001772 ORTHO05D005958 7.3e-22 108.2 193 45.1
PSO063G7149 Papaver somniferum HOM05D001772 ORTHO05D005958 9.6e-22 107.8 193 44.6
Actinidia28499 Actinidia chinensis HOM05D001772 ORTHO05D005958 1.2e-21 107.5 108 60.2
ClCG05G000930 Citrullus lanatus HOM05D001772 ORTHO05D005958 1.2e-21 107.5 201 42.8
PGSC0003DMG400000214 Solanum tuberosum HOM05D001772 ORTHO05D005958 2.1e-21 106.7 169 43.8
PGSC0003DMG400019883 Solanum tuberosum HOM05D001772 ORTHO05D005958 2.1e-21 106.7 202 40.6
QL04p056704 Quercus lobata HOM05D001772 ORTHO05D005958 2.8e-21 106.3 83 67.5
Migut.N01556 Erythranthe guttata HOM05D001772 ORTHO05D005958 3.6e-21 105.9 191 53.4
EL10Ac1g00296 Beta vulgaris HOM05D001772 ORTHO05D005958 6.2e-21 105.1 185 49.7
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 8.1e-21 104.8 193 45.6
Manes.05G024700 Manihot esculenta HOM05D001772 ORTHO05D005958 8.1e-21 104.8 190 40.5
Sp6g01090 Schrenkiella parvula HOM05D001772 ORTHO05D005958 8.1e-21 104.8 96 61.5
Duzib133G1484 Durio zibethinus HOM05D001772 ORTHO05D005958 1.1e-20 104.4 88 67.0
Sed0022865 Sechium edule HOM05D001772 ORTHO05D005958 1.1e-20 104.4 193 45.6
GSVIVG01027075001 Vitis vinifera HOM05D001772 ORTHO05D005958 1.1e-20 104.4 96 61.5
MD01G1078500 Malus domestica HOM05D001772 ORTHO05D005958 1.4e-20 104.0 175 46.9
AUR62004468 Chenopodium quinoa HOM05D001772 ORTHO05D005958 1.8e-20 103.6 223 43.5
THA.LOC104809830 Tarenaya hassleriana HOM05D001772 ORTHO05D005958 1.8e-20 103.6 188 50.5
Atru.chr5.643 Acer truncatum HOM05D001772 ORTHO05D005958 3.1e-20 102.8 78 70.5
Lsat_1_v5_gn_3_139620 Lactuca sativa HOM05D001772 ORTHO05D005958 3.1e-20 102.8 207 38.2
Pp3c20_13120 Physcomitrium patens HOM05D001772 ORTHO05D005958 3.1e-20 102.8 106 52.8
vmacro20858 Vaccinium macrocarpon HOM05D001772 ORTHO05D005958 3.1e-20 102.8 167 46.1
Pp3c14_24370 Physcomitrium patens HOM05D001772 ORTHO05D005958 4.0e-20 102.4 100 53.0
Lj9A595G54 Lonicera japonica HOM05D001772 ORTHO05D005958 5.3e-20 102.1 99 59.6
Rhsim01G0171300 Rhododendron simsii HOM05D001772 ORTHO05D005958 5.3e-20 102.1 172 44.2
Nitab4.5_0001123g0060 Nicotiana tabacum HOM05D001772 ORTHO05D005958 1.2e-19 100.9 200 40.5
Sopen10g005380 Solanum pennellii HOM05D001772 ORTHO05D005958 3.4e-19 99.4 190 40.5
MBI06_g46728_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D005958 4.4e-19 99.0 174 44.3
Solyc10g009570.3 Solanum lycopersicum HOM05D001772 ORTHO05D005958 4.4e-19 99.0 198 38.4
CAN.G818.1 Capsicum annuum HOM05D001772 ORTHO05D005958 5.8e-19 98.6 190 40.0
Pp3c10_10490 Physcomitrium patens HOM05D001772 ORTHO05D005958 9.9e-19 97.8 81 61.7
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 9.9e-19 97.8 218 38.5
MSTRG.17331 Avicennia marina HOM05D001772 ORTHO05D005958 8.4e-18 94.7 100 55.0
AagrBONN_evm.TU.Sc2ySwM_228.819 Anthoceros agrestis HOM05D001772 ORTHO05D005958 4.2e-17 92.4 92 51.1
Peaxi162Scf00218g00416 Petunia axillaris HOM05D001772 ORTHO05D005958 1.6e-16 90.5 189 37.6
Oeu007904.1 Olea europaea HOM05D001772 ORTHO05D005958 4.6e-16 89.0 175 38.3
Aa31LG5G910 Aethionema arabicum HOM05D001772 ORTHO05D005958 3.0e-15 86.3 219 45.7
Nn5g29118 Nelumbo nucifera HOM05D001772 ORTHO05D005958 1.1e-14 84.3 60 75.0
SalBow3G2334 Salvia bowleyana HOM05D001772 ORTHO05D005958 5.6e-14 82.0 80 51.2
Ah.05g179770 Amaranthus hybridus HOM05D001772 ORTHO05D005958 1.2e-11 74.3 184 35.9
Sabra02G0143000 Salix brachista HOM05D001772 ORTHO05D005958 1.2e-11 74.3 169 36.1
Sc23g0002200 Simmondsia chinensis HOM05D001772 ORTHO05D005958 2.7e-08 63.2 46 73.9
CBR_g40436 Chara braunii HOM05D001772 ORTHO05D005958 1.0e-07 61.2 67 43.3
MBI06_g29328_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D005958 1.1e-06 57.8 44 68.2
Hund27213 Selenicereus undatus HOM05D001772 ORTHO05D005958 9.6e-06 54.7 207 30.4


User provided reference genes

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