Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.1e-96 356.7 188 100.0
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.1e-96 356.7 188 100.0
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.0e-82 309.3 201 77.6
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 8.0e-47 191.0 185 47.6
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 8.9e-46 187.6 158 52.5
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 4.4e-45 185.3 158 51.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.3e-44 183.7 157 52.2
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 6.4e-44 181.4 158 52.5
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.2e-43 179.1 158 50.6
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 5.4e-43 178.3 158 51.3
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 9.2e-43 177.6 186 44.6
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.2e-42 177.2 179 48.0
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 2.7e-42 176.0 158 50.6
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 3.5e-42 175.6 158 50.6
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 3.5e-42 175.6 155 52.3
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 3.5e-42 175.6 186 44.1
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 6.0e-42 174.9 158 50.6
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 7.8e-42 174.5 158 48.7
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 7.8e-42 174.5 157 49.7
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 7.8e-42 174.5 155 49.7
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.0e-41 174.1 115 75.7
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.3e-41 173.7 186 43.0
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.7e-41 173.3 158 48.1
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 2.3e-41 172.9 153 51.0
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 2.3e-41 172.9 158 48.7
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 3.0e-41 172.6 158 48.7
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 3.0e-41 172.6 158 47.5
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.0e-41 172.6 148 51.4
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.9e-41 172.2 148 50.7
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 3.9e-41 172.2 158 50.0
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 6.6e-41 171.4 158 48.1
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 8.6e-41 171.0 158 50.0
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 8.6e-41 171.0 158 48.1
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.1e-40 170.6 158 46.2
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 1.1e-40 170.6 158 48.1
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.1e-40 170.6 157 49.0
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.5e-40 170.2 158 48.1
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.5e-40 170.2 158 48.1
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.5e-40 170.2 155 49.7
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.5e-40 170.2 154 51.9
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 3.3e-40 169.1 155 48.4
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 4.3e-40 168.7 157 50.3
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 7.3e-40 167.9 158 48.1
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.2e-39 167.2 148 51.4
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 1.6e-39 166.8 157 48.4
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.1e-39 166.4 158 44.9
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 2.1e-39 166.4 148 50.7
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 2.8e-39 166.0 187 41.2
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 2.8e-39 166.0 188 42.6
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 3.6e-39 165.6 158 48.7
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 4.7e-39 165.2 159 47.2
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 6.2e-39 164.9 158 47.5
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 6.2e-39 164.9 151 48.3
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.4e-38 163.7 159 46.5
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.8e-38 163.3 154 47.4
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 2.3e-38 162.9 155 49.0
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.3e-38 162.9 189 42.3
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.1e-38 162.5 160 46.9
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.1e-38 162.5 151 47.0
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 4.0e-38 162.2 150 52.0
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 4.0e-38 162.2 159 47.8
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 5.2e-38 161.8 152 51.3
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 5.2e-38 161.8 154 50.0
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 6.8e-38 161.4 181 41.4
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.8e-38 161.4 159 45.9
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 8.9e-38 161.0 157 46.5
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 8.9e-38 161.0 159 45.3
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.2e-37 160.6 151 53.0
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.2e-37 160.6 156 45.5
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 1.2e-37 160.6 151 47.0
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.5e-37 160.2 158 44.9
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 2.0e-37 159.8 153 47.7
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.0e-37 159.8 148 48.0
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.6e-37 159.5 173 44.5
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 2.6e-37 159.5 158 44.3
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 2.6e-37 159.5 156 48.7
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.4e-37 159.1 148 48.0
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 4.4e-37 158.7 159 47.2
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 5.8e-37 158.3 148 47.3
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.3e-36 157.1 159 46.5
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.7e-36 156.8 184 42.9
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.9e-36 156.0 159 44.7
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 3.7e-36 155.6 154 46.8
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 8.3e-36 154.5 173 45.7
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.1e-35 154.1 157 45.2
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 2.4e-35 152.9 149 45.6
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 2.4e-35 152.9 158 44.3
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 3.2e-35 152.5 155 45.8
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 4.1e-35 152.1 155 45.8
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 7.1e-35 151.4 157 43.9
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 7.1e-35 151.4 157 43.9
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 9.2e-35 151.0 157 45.9
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.6e-34 150.2 157 45.9
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.6e-34 150.2 185 40.0
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 3.5e-34 149.1 155 44.5
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 3.5e-34 149.1 156 43.6
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 4.6e-34 148.7 155 44.5
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 4.6e-34 148.7 157 45.2
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 6.0e-34 148.3 155 45.2
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 6.0e-34 148.3 155 44.5
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 7.8e-34 147.9 157 45.2
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 7.8e-34 147.9 159 44.0
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 1.7e-33 146.7 155 44.5
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 1.7e-33 146.7 155 44.5
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 3.9e-33 145.6 157 44.6
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.5e-32 143.7 157 43.3
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 1.5e-32 143.7 152 42.8
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.9e-32 143.3 179 40.2
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 5.6e-32 141.7 157 43.3
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 2.1e-31 139.8 157 41.4
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.2e-29 134.0 190 36.3
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 5.8e-29 131.7 122 51.6
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 7.6e-29 131.3 160 38.8
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 2.4e-27 126.3 157 40.1
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 3.2e-27 125.9 155 39.4
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.1e-25 118.6 87 60.9
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 6.6e-25 118.2 87 58.6
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.9e-24 116.7 145 41.4
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 2.5e-24 116.3 161 39.8
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 2.5e-24 116.3 155 36.8
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 5.6e-24 115.2 86 58.1
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 9.6e-24 114.4 87 56.3
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 4.0e-22 109.0 90 53.3
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 8.4e-20 101.3 113 48.7
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.9e-19 100.1 142 35.9
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.2e-18 97.4 151 34.4
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 2.5e-16 89.7 80 42.5
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 4.3e-16 89.0 143 32.2
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 7.1e-11 71.6 71 43.7
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.0e-09 66.2 75 42.7
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 1.6e-07 60.5 71 39.4
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 3.7e-07 59.3 44 56.8
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 8.1e-07 58.2 66 43.9
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 1.4e-06 57.4 58 39.7
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 5.3e-06 55.5 61 41.0


User provided reference genes

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