Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 1.9e-88 329.3 185 100.0
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 3.7e-28 129.0 184 45.1
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.2e-26 124.0 187 43.9
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 1.6e-26 123.6 178 42.1
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.6e-26 123.6 176 42.0
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 2.0e-26 123.2 187 43.9
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 2.0e-26 123.2 175 42.3
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.5e-26 122.5 180 43.3
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 7.7e-26 121.3 197 41.1
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.0e-25 120.9 180 43.3
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 1.0e-25 120.9 186 41.9
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 1.7e-25 120.2 175 44.6
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 2.9e-25 119.4 182 41.2
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 8.5e-25 117.9 186 40.9
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 8.5e-25 117.9 178 42.7
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.1e-24 117.5 179 40.2
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 1.5e-24 117.1 182 42.3
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 2.5e-24 116.3 179 43.0
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 3.2e-24 115.9 191 42.4
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 7.2e-24 114.8 178 40.4
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 7.2e-24 114.8 178 42.1
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 9.4e-24 114.4 181 42.5
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.2e-23 114.0 187 41.7
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 1.6e-23 113.6 188 41.5
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 2.1e-23 113.2 187 42.8
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.1e-23 113.2 180 42.8
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 2.1e-23 113.2 186 39.2
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 4.7e-23 112.1 188 41.5
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 8.0e-23 111.3 190 38.4
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 3.0e-22 109.4 176 37.5
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 4.0e-22 109.0 182 40.1
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 4.0e-22 109.0 191 41.9
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 6.7e-22 108.2 178 39.9
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 6.7e-22 108.2 183 35.5
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 6.7e-22 108.2 191 37.7
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 8.8e-22 107.8 193 37.3
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 1.2e-21 107.5 190 40.5
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 1.5e-21 107.1 186 39.8
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 2.6e-21 106.3 180 40.6
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 3.3e-21 105.9 185 38.9
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 7.5e-21 104.8 181 39.8
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.7e-20 103.6 176 39.2
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.7e-20 103.6 169 40.8
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 3.7e-20 102.4 186 37.6
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 6.3e-20 101.7 177 39.0
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.3e-20 101.7 183 41.5
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 8.2e-20 101.3 178 37.6
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.4e-19 100.5 181 38.1
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 3.1e-19 99.4 183 41.5
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.1e-19 99.4 183 41.5
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 3.1e-19 99.4 170 38.2
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 4.1e-19 99.0 182 36.8
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 4.1e-19 99.0 186 39.8
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 4.1e-19 99.0 183 41.0
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 5.3e-19 98.6 178 37.1
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 7.0e-19 98.2 115 47.0
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 7.0e-19 98.2 185 33.5
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.2e-18 97.4 177 34.5
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.6e-18 97.1 183 41.0
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.6e-18 97.1 185 35.1
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 2.7e-18 96.3 178 38.2
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.7e-18 96.3 182 38.5
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.7e-18 96.3 182 38.5
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 3.5e-18 95.9 181 38.1
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 7.7e-18 94.7 181 36.5
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 7.7e-18 94.7 87 56.3
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 1.0e-17 94.4 189 36.5
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.0e-17 94.4 175 36.0
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.3e-17 94.0 102 47.1
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.7e-17 93.6 173 36.4
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.7e-17 93.6 181 35.9
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.7e-17 93.6 181 37.0
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.7e-17 93.6 180 37.2
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 2.2e-17 93.2 179 39.1
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 2.9e-17 92.8 178 37.1
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 2.9e-17 92.8 180 36.1
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 5.0e-17 92.0 180 38.3
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 5.0e-17 92.0 179 38.5
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 5.0e-17 92.0 179 34.6
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 6.5e-17 91.7 173 35.3
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 6.5e-17 91.7 179 37.4
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 6.5e-17 91.7 182 37.9
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 8.5e-17 91.3 114 43.0
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 8.5e-17 91.3 182 38.5
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.1e-16 90.9 175 37.1
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 1.5e-16 90.5 183 36.6
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.9e-16 90.1 90 48.9
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.2e-16 89.4 192 35.9
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 3.2e-16 89.4 101 44.6
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 5.5e-16 88.6 181 33.1
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 7.2e-16 88.2 178 36.5
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 7.2e-16 88.2 179 36.9
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 9.4e-16 87.8 177 33.9
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 9.4e-16 87.8 191 36.1
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 9.4e-16 87.8 188 36.2
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 1.2e-15 87.4 194 33.5
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 1.2e-15 87.4 178 37.6
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 2.7e-15 86.3 175 33.7
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 3.6e-15 85.9 182 35.7
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 3.6e-15 85.9 178 33.1
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 6.1e-15 85.1 175 32.6
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 6.1e-15 85.1 187 33.7
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 6.1e-15 85.1 179 36.9
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 6.1e-15 85.1 176 34.7
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 8.0e-15 84.7 181 37.0
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 8.0e-15 84.7 183 37.7
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 8.0e-15 84.7 176 35.2
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 1.0e-14 84.3 186 33.3
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 1.0e-14 84.3 93 46.2
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 1.0e-14 84.3 181 33.7
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 1.0e-14 84.3 175 33.7
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.0e-14 84.3 101 41.6
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.8e-14 83.6 178 32.6
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 1.8e-14 83.6 180 33.9
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 1.8e-14 83.6 180 33.9
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.8e-14 83.6 106 43.4
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.8e-14 83.6 176 35.2
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 2.3e-14 83.2 178 32.6
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 2.3e-14 83.2 178 32.6
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 3.0e-14 82.8 180 34.4
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 4.0e-14 82.4 177 35.6
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 5.2e-14 82.0 180 33.9
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 5.2e-14 82.0 180 33.9
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 5.2e-14 82.0 182 36.3
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 8.8e-14 81.3 175 34.3
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 2.0e-13 80.1 176 34.7
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 3.4e-13 79.3 177 36.2
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 3.4e-13 79.3 175 33.1
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 4.4e-13 79.0 185 34.1
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.3e-12 77.4 183 35.0
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 4.8e-12 75.5 180 32.8
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 3.1e-11 72.8 90 43.3


User provided reference genes

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