Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 4.6e-177 624.4 306 100.0
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.1e-141 505.4 306 76.8
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 3.5e-140 501.9 306 77.1
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 5.9e-140 501.1 306 75.8
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 1.0e-139 500.4 306 76.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 3.8e-139 498.4 306 76.1
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 3.8e-139 498.4 306 75.5
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 1.1e-138 496.9 306 76.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 5.5e-138 494.6 306 74.8
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 5.5e-138 494.6 306 74.8
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 5.5e-138 494.6 306 75.5
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 3.6e-137 491.9 306 75.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 4.7e-137 491.5 306 73.9
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 6.1e-137 491.1 306 74.8
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 8.0e-137 490.7 306 74.8
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.4e-136 490.0 306 75.2
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 4.0e-136 488.4 306 75.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 5.2e-136 488.0 306 72.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 6.8e-136 487.6 306 73.9
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 8.8e-136 487.3 306 73.5
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.5e-135 486.5 306 74.2
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 2.6e-135 485.7 306 73.2
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 2.6e-135 485.7 306 74.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 5.7e-135 484.6 306 74.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 9.8e-135 483.8 306 74.2
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.2e-134 482.6 306 75.2
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.2e-134 482.6 306 72.9
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 2.2e-134 482.6 306 73.9
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.8e-134 482.3 306 74.2
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 4.8e-134 481.5 306 74.5
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 4.8e-134 481.5 306 72.5
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.1e-133 480.3 306 74.2
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.4e-133 479.9 306 73.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.4e-133 479.9 306 72.5
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.8e-133 479.6 306 72.5
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 3.1e-133 478.8 306 73.5
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 3.1e-133 478.8 306 74.5
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.1e-133 478.4 306 74.2
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 5.4e-133 478.0 306 73.5
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.4e-133 478.0 306 73.5
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 9.1e-133 477.2 306 72.2
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 2.0e-132 476.1 306 73.2
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.7e-132 475.7 306 73.2
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 2.7e-132 475.7 306 73.2
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.5e-132 474.9 306 73.5
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 5.9e-132 474.6 306 72.9
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 7.7e-132 474.2 304 72.4
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 7.7e-132 474.2 306 73.2
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.0e-131 473.8 306 73.2
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.3e-131 473.4 306 73.9
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.3e-131 473.4 235 100.0
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.7e-131 473.0 306 73.9
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 1.7e-131 473.0 306 73.2
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.7e-131 473.0 306 73.2
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.3e-131 472.6 306 71.6
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 2.3e-131 472.6 306 72.2
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 2.9e-131 472.2 306 72.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 6.6e-131 471.1 306 70.6
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.5e-130 469.9 306 71.6
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.9e-130 469.5 306 71.6
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.5e-130 469.2 306 72.2
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.5e-130 468.0 306 71.2
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.2e-129 466.8 287 74.6
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.2e-129 466.8 306 72.5
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 4.0e-128 461.8 390 59.7
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 8.9e-128 460.7 322 68.3
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 7.5e-127 457.6 306 69.6
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 4.9e-126 454.9 357 62.2
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 7.8e-124 447.6 369 60.7
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 4.3e-122 441.8 309 68.6
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 8.0e-121 437.6 285 73.7
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.8e-120 436.4 306 65.4
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.3e-118 430.3 306 68.0
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.9e-118 429.1 370 56.8
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 3.7e-118 428.7 293 72.0
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 2.4e-117 426.0 273 74.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.4e-117 426.0 277 69.0
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 4.6e-116 421.8 306 68.0
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 6.0e-116 421.4 278 70.9
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 2.3e-115 419.5 293 69.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.0e-115 418.3 277 70.8
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.5e-114 416.0 276 70.7
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.2e-113 413.7 283 68.2
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 4.0e-112 408.7 306 63.4
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 9.8e-111 404.1 305 62.6
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.6e-105 385.6 242 74.8
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 6.8e-104 381.3 235 77.4
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.1e-100 369.8 306 59.8
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.7e-86 323.6 314 53.5
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.0e-75 287.7 242 61.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.5e-74 283.1 188 68.1
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 6.9e-64 248.4 309 45.3
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.3e-59 234.2 564 29.1
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 2.8e-57 226.5 280 45.4
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 3.7e-57 226.1 131 77.9
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 7.7e-55 218.4 147 71.4
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.3e-50 202.6 170 63.5
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.4e-24 117.9 221 33.9
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.0e-23 114.0 151 45.7
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 4.7e-20 102.8 96 45.8
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 8.8e-19 98.6 71 62.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 7.5e-18 95.5 72 61.1


User provided reference genes

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