Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03816 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 0.0e+00 1655.2 817 100.0
SEGI_28583 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 1.3e-205 720.7 398 91.7
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 1.6e-62 245.4 783 28.9
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 9.5e-60 236.1 776 29.5
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 5.0e-53 213.8 750 28.3
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 8.6e-53 213.0 759 28.7
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 7.3e-52 209.9 681 29.7
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 1.0e-50 206.1 775 27.9
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 1.4e-50 205.7 771 28.0
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 1.8e-50 205.3 744 27.8
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 2.3e-50 204.9 758 28.5
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 5.2e-50 203.8 686 27.4
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 2.6e-49 201.4 680 28.7
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 5.8e-49 200.3 656 28.4
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 9.8e-49 199.5 721 27.3
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 4.9e-48 197.2 759 27.3
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 6.4e-48 196.8 678 29.1
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 6.4e-48 196.8 699 26.3
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 8.3e-48 196.4 658 29.2
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.4e-47 195.7 752 28.1
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 1.4e-47 195.7 672 28.3
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 1.4e-47 195.7 676 29.0
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 1.9e-47 195.3 663 28.7
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 2.4e-47 194.9 704 26.7
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 3.2e-47 194.5 761 26.7
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 5.4e-47 193.7 758 27.0
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 5.4e-47 193.7 759 26.7
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 1.6e-46 192.2 673 26.6
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 3.5e-46 191.0 759 26.6
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.5e-46 191.0 758 27.0
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 7.8e-46 189.9 749 27.0
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 7.8e-46 189.9 720 27.4
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 7.8e-46 189.9 678 29.8
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 1.0e-45 189.5 699 27.3
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 1.0e-45 189.5 662 28.1
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 1.7e-45 188.7 687 27.4
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 2.3e-45 188.3 762 26.2
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 8.6e-45 186.4 731 27.2
ATR0022G053 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.5e-44 185.7 244 41.8
TAR383G0351 Trochodendron aralioides HOM05D004345 ORTHO05D005192 2.5e-44 184.9 280 40.0
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 9.5e-44 183.0 612 30.6
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 2.8e-43 181.4 674 28.6
HPP92_000827 Vanilla planifolia HOM05D004345 ORTHO05D005192 3.6e-43 181.0 684 25.0
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 8.1e-43 179.9 719 27.4
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 8.1e-43 179.9 631 29.6
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 8.1e-43 179.9 741 27.4
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.8e-42 178.7 719 27.4
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 4.0e-42 177.6 684 26.0
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 6.8e-42 176.8 692 28.0
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 1.2e-41 176.0 769 26.1
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 1.2e-41 176.0 659 27.5
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 1.5e-41 175.6 705 27.5
Pp3c14_24820 Physcomitrium patens HOM05D004345 ORTHO05D005192 1.5e-41 175.6 750 24.4
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 2.6e-41 174.9 600 28.8
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 7.5e-41 173.3 736 25.8
CDE09G0455 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 9.8e-41 172.9 586 27.5
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 2.9e-40 171.4 759 26.0
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 2.9e-40 171.4 662 26.4
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 2.9e-40 171.4 657 26.6
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 2.9e-40 171.4 738 27.0
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 3.7e-40 171.0 609 28.4
AagrBONN_evm.TU.Sc2ySwM_344.4665 Anthoceros agrestis HOM05D004345 ORTHO05D005192 4.9e-40 170.6 410 31.0
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 4.9e-40 170.6 602 27.9
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 8.3e-40 169.9 674 27.4
SMO203G0127 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 8.3e-40 169.9 514 28.2
SMO297G0008 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 8.3e-40 169.9 415 32.0
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 2.7e-38 164.9 748 26.3
Mapoly0100s0030 Marchantia polymorpha HOM05D004345 ORTHO05D005192 2.7e-38 164.9 463 30.9
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 6.0e-38 163.7 657 25.0
Os03g0240400 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 7.8e-38 163.3 736 23.4
Aqoxy7G01729 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.3e-37 162.5 291 37.5
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.7e-37 162.2 584 26.7
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 5.1e-37 160.6 694 26.4
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 6.6e-37 160.2 713 26.6
ATR1192G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.1e-36 159.5 469 31.1
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 1.1e-36 159.5 416 30.5
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 1.9e-36 158.7 671 26.7
DCAR_009432 Daucus carota HOM05D004345 ORTHO05D005192 1.9e-36 158.7 592 26.9
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 1.9e-36 158.7 628 26.6
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 2.5e-36 158.3 684 26.8
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 7.3e-36 156.8 416 30.8
ECA238G4368 Erigeron canadensis HOM05D004345 ORTHO05D005192 9.5e-36 156.4 652 24.5
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 2.1e-35 155.2 408 32.4
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 2.8e-35 154.8 594 28.1
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 2.8e-35 154.8 424 30.2
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 2.8e-35 154.8 751 25.2
ECA234G4090 Erigeron canadensis HOM05D004345 ORTHO05D005192 8.1e-35 153.3 615 25.9
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.1e-34 152.9 674 26.0
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.1e-34 152.9 428 31.3
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.4e-34 152.5 405 32.3
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 5.2e-34 150.6 664 25.8
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.7e-32 145.6 272 35.7
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 6.4e-32 143.7 662 25.2
Ah.03g148550 Amaranthus hybridus HOM05D004345 ORTHO05D005192 8.4e-32 143.3 663 25.3
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 2.4e-31 141.7 674 24.5
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 7.1e-31 140.2 717 24.8
Oeu031657.1 Olea europaea HOM05D004345 ORTHO05D005192 1.2e-30 139.4 314 31.5
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 6.6e-29 133.7 312 28.5
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 6.6e-29 133.7 687 24.2
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 1.9e-28 132.1 684 22.8
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 3.6e-27 127.9 691 24.0
CiPaw.12G047000 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.4e-26 125.2 205 37.1
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 2.0e-25 122.1 681 23.1
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 3.4e-25 121.3 678 23.0
Os09g0104700 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 5.8e-25 120.6 647 24.3
Thhalv10003730m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 6.4e-24 117.1 680 24.0
PSO384G0273 Papaver somniferum HOM05D004345 ORTHO05D005192 8.4e-24 116.7 537 25.7
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 8.4e-24 116.7 415 28.2
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 1.9e-23 115.5 591 24.0
PSO384G0711 Papaver somniferum HOM05D004345 ORTHO05D005192 2.4e-23 115.2 374 27.5
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 2.1e-22 112.1 592 23.1
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 4.6e-22 110.9 725 23.0
QL07p000983 Quercus lobata HOM05D004345 ORTHO05D005192 7.8e-22 110.2 203 34.0
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 1.3e-21 109.4 580 25.5
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 1.5e-20 105.9 622 23.5
Thecc.05G018000 Theobroma cacao HOM05D004345 ORTHO05D005192 1.3e-19 102.8 320 29.4
RcHm_v2.0_Chr6g0264721 Rosa chinensis HOM05D004345 ORTHO05D005192 2.4e-18 98.6 196 33.7
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 2.2e-16 92.0 231 30.7
Gorai.007G313800 Gossypium raimondii HOM05D004345 ORTHO05D005192 2.1e-14 85.5 202 33.2
Gohir.D11G289900 Gossypium hirsutum HOM05D004345 ORTHO05D005192 3.5e-14 84.7 202 31.7
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 7.9e-14 83.6 213 30.0
C05p47510 Brassica napus HOM05D004345 ORTHO05D005192 9.6e-12 76.6 487 23.6
ATR0661G336 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.4e-10 72.8 500 24.2
BcaB06g25876 Brassica carinata HOM05D004345 ORTHO05D005192 6.9e-10 70.5 194 26.3
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 6.9e-10 70.5 350 23.4
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 3.4e-09 68.2 194 30.9
Psat5g200920 Pisum sativum HOM05D000856 ORTHO05D005192 5.8e-09 67.4 94 41.5
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 3.8e-08 64.7 173 27.7
BcaB01g01503 Brassica carinata HOM05D004345 ORTHO05D005192 4.9e-08 64.3 388 22.2


User provided reference genes

Program Settings