Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 3.0e-93 345.1 170 100.0
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.0e-61 240.4 139 82.7
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.0e-61 240.4 139 82.7
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.8e-61 239.6 139 82.7
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 4.0e-61 238.4 139 82.0
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 4.0e-61 238.4 139 82.0
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 5.2e-61 238.0 139 82.7
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 5.2e-61 238.0 139 82.0
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 6.8e-61 237.7 139 81.3
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 6.8e-61 237.7 139 81.3
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.2e-60 236.9 139 82.0
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.2e-60 236.9 139 82.0
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 3.4e-60 235.3 136 82.4
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 4.4e-60 235.0 139 80.6
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 5.7e-60 234.6 139 80.6
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 5.7e-60 234.6 139 80.6
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 7.5e-60 234.2 139 80.6
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 7.5e-60 234.2 139 80.6
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 7.5e-60 234.2 147 76.2
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 9.8e-60 233.8 136 82.4
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 9.8e-60 233.8 138 81.2
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 9.8e-60 233.8 136 81.6
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.3e-59 233.4 136 82.4
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 2.2e-59 232.6 136 80.1
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.2e-59 232.6 136 81.6
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.8e-59 232.3 136 80.9
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 3.7e-59 231.9 136 80.1
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.9e-59 231.5 136 81.6
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 6.3e-59 231.1 136 80.9
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 6.3e-59 231.1 139 79.1
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 6.3e-59 231.1 136 81.6
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 6.3e-59 231.1 139 80.6
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 8.3e-59 230.7 136 79.4
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 8.3e-59 230.7 136 80.9
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.1e-58 230.3 139 79.9
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.1e-58 230.3 136 81.6
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.1e-58 230.3 136 80.9
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.1e-58 230.3 136 80.9
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 1.1e-58 230.3 136 80.9
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.4e-58 229.9 139 79.9
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.4e-58 229.9 138 79.7
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.8e-58 229.6 139 79.1
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.8e-58 229.6 136 80.1
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.8e-58 229.6 136 80.9
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 2.4e-58 229.2 139 78.4
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.4e-58 229.2 139 78.4
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.4e-58 229.2 139 78.4
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.4e-58 229.2 136 78.7
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 3.1e-58 228.8 136 80.1
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 3.1e-58 228.8 136 80.1
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 4.1e-58 228.4 136 80.1
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 4.1e-58 228.4 136 80.1
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 4.1e-58 228.4 139 78.4
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 4.1e-58 228.4 138 80.4
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 5.4e-58 228.0 139 77.7
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 5.4e-58 228.0 136 80.1
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 7.0e-58 227.6 139 77.7
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 7.0e-58 227.6 136 80.1
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 9.2e-58 227.3 136 79.4
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 9.2e-58 227.3 136 80.9
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 1.2e-57 226.9 136 78.7
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 1.2e-57 226.9 139 77.7
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.6e-57 226.5 136 78.7
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.6e-57 226.5 136 79.4
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 1.6e-57 226.5 136 80.1
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.6e-57 226.5 139 76.3
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.6e-57 226.5 136 79.4
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.0e-57 226.1 136 79.4
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.7e-57 225.7 139 78.4
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 2.7e-57 225.7 136 79.4
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 2.7e-57 225.7 139 77.7
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 3.5e-57 225.3 139 76.3
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.5e-57 225.3 136 80.1
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.5e-57 225.3 136 80.1
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.5e-57 225.3 136 80.1
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 3.5e-57 225.3 139 77.7
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 3.5e-57 225.3 136 77.9
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 4.5e-57 224.9 136 79.4
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 4.5e-57 224.9 136 78.7
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 5.9e-57 224.6 136 77.9
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 5.9e-57 224.6 136 77.2
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 7.7e-57 224.2 134 80.6
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.3e-56 223.4 136 77.2
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.3e-56 223.4 136 77.2
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.7e-56 223.0 139 77.7
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 2.9e-56 222.2 135 79.3
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 3.8e-56 221.9 136 76.5
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 3.8e-56 221.9 136 76.5
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 3.8e-56 221.9 136 77.2
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 3.8e-56 221.9 136 75.7
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 3.8e-56 221.9 136 76.5
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 3.8e-56 221.9 136 76.5
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 5.0e-56 221.5 136 77.2
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 5.0e-56 221.5 136 77.2
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 5.0e-56 221.5 136 77.2
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 8.6e-56 220.7 136 76.5
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 8.6e-56 220.7 136 77.2
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.1e-55 220.3 136 75.7
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.1e-55 220.3 136 76.5
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.1e-55 220.3 136 76.5
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.1e-55 220.3 136 75.0
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.9e-55 219.5 136 77.2
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.5e-55 219.2 136 76.5
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 2.5e-55 219.2 136 76.5
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 2.5e-55 219.2 136 76.5
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 2.5e-55 219.2 136 76.5
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 3.3e-55 218.8 136 75.7
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 3.3e-55 218.8 136 76.5
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 3.3e-55 218.8 136 76.5
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.8e-53 211.1 129 75.2
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 7.5e-52 207.6 138 72.5
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 5.8e-44 181.4 136 64.0
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 4.6e-41 171.8 99 81.8
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 2.3e-40 169.5 134 59.0
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 2.1e-38 162.9 127 55.9
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 2.6e-36 156.0 93 77.4
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.5e-31 140.2 93 69.9
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.8e-19 99.0 66 68.2
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.9e-19 98.6 57 77.2
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.8e-11 72.4 40 85.0


User provided reference genes

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