Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 5.7e-264 913.7 457 100.0
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 4.0e-108 396.0 432 46.5
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 5.1e-103 379.0 424 46.2
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 1.1e-102 377.9 429 46.9
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 3.3e-102 376.3 421 48.0
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 7.3e-102 375.2 423 47.0
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 9.5e-102 374.8 423 46.1
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 1.2e-101 374.4 423 47.8
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 4.1e-97 359.4 425 43.8
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.2e-96 357.8 423 46.1
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 2.1e-96 357.1 419 44.6
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 6.0e-96 355.5 424 44.6
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 7.8e-96 355.1 423 45.6
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.1e-94 351.3 430 43.3
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 3.3e-94 349.7 423 45.2
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 4.3e-94 349.4 435 43.7
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 5.6e-94 349.0 416 43.8
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 5.6e-94 349.0 436 43.8
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 9.6e-94 348.2 438 43.2
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 2.8e-93 346.7 423 44.9
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 2.8e-93 346.7 427 41.7
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 2.8e-93 346.7 433 43.0
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 1.1e-92 344.7 421 43.9
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.8e-92 344.0 421 43.2
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.8e-92 344.0 441 42.4
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 2.4e-92 343.6 416 44.7
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 2.4e-92 343.6 436 43.1
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 5.8e-91 339.0 431 43.9
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 9.9e-91 338.2 416 42.5
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 9.9e-91 338.2 457 41.4
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 1.7e-90 337.4 420 44.0
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 2.9e-90 336.7 422 41.7
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.9e-89 334.0 437 40.7
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 2.4e-89 333.6 423 41.8
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 7.1e-89 332.0 427 41.7
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.6e-88 330.9 421 40.4
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 1.6e-88 330.9 417 43.2
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 1.6e-88 330.9 425 40.7
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 1.6e-88 330.9 423 42.1
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 2.1e-88 330.5 477 39.4
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 3.5e-88 329.7 435 40.0
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 6.0e-88 328.9 442 41.9
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 6.0e-88 328.9 442 42.5
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 1.7e-87 327.4 422 40.0
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 3.0e-87 326.6 428 40.9
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 3.9e-87 326.2 426 40.8
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 3.9e-87 326.2 422 40.3
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 5.1e-87 325.9 418 40.9
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 5.1e-87 325.9 298 52.7
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 2.5e-86 323.6 409 43.3
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 3.3e-86 323.2 423 40.0
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.3e-85 321.2 423 39.5
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 2.1e-85 320.5 426 42.3
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 2.8e-85 320.1 423 39.2
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 6.2e-85 318.9 423 42.1
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.8e-84 317.4 414 40.6
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.8e-84 317.4 430 40.9
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 1.8e-84 317.4 435 40.5
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 3.1e-84 316.6 428 39.5
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 3.1e-84 316.6 422 40.5
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 4.0e-84 316.2 429 40.6
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 4.0e-84 316.2 447 41.4
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 4.0e-84 316.2 427 39.8
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 6.9e-84 315.5 422 39.6
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 6.9e-84 315.5 422 40.3
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.5e-83 314.3 443 38.8
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 2.0e-83 313.9 422 39.8
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 2.6e-83 313.5 428 39.0
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 3.4e-83 313.2 441 40.6
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 3.4e-83 313.2 433 39.5
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 3.4e-83 313.2 439 39.0
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 5.8e-83 312.4 443 39.1
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.7e-82 310.8 398 41.2
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.7e-82 310.8 443 39.1
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 2.2e-82 310.5 420 40.0
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 8.4e-82 308.5 422 39.6
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 3.2e-81 306.6 417 39.1
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 1.2e-80 304.7 425 40.5
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 2.7e-80 303.5 284 53.2
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.0e-79 301.6 441 37.9
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 5.1e-79 299.3 417 39.8
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.9e-78 297.4 444 41.7
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 4.3e-78 296.2 438 40.0
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 5.6e-78 295.8 418 40.7
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 5.6e-78 295.8 367 41.7
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 2.1e-77 293.9 421 38.2
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.1e-76 291.6 421 38.5
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 5.8e-75 285.8 436 37.8
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 7.6e-75 285.4 458 36.9
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.4e-73 281.2 434 38.7
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.2e-72 278.1 421 38.0
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 4.6e-72 276.2 291 48.5
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 7.4e-70 268.9 253 50.6
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 1.8e-68 264.2 422 35.3
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 4.5e-67 259.6 348 39.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.6e-67 258.8 425 35.8
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 2.9e-66 256.9 367 39.8
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 9.3e-65 251.9 433 35.8
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 1.3e-63 248.1 361 37.7
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.3e-63 248.1 425 34.4
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 2.5e-62 243.8 448 33.5
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 2.9e-58 230.3 388 36.6
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 8.8e-55 218.8 255 43.5
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.3e-45 186.0 343 32.9
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.4e-44 184.1 284 36.3
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 5.5e-41 172.9 255 38.8
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 9.7e-38 162.2 430 28.4
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 2.2e-37 161.0 137 52.6
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 8.2e-37 159.1 134 56.7
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 1.4e-36 158.3 130 54.6
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 9.1e-36 155.6 289 33.6
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 5.9e-35 152.9 130 56.2
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 1.7e-34 151.4 220 35.9
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 5.3e-28 129.8 307 31.6
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 5.9e-27 126.3 158 41.8
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 5.0e-26 123.2 224 37.1
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 6.1e-24 116.3 130 45.4
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 1.2e-22 112.1 159 35.8
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 6.3e-21 106.3 266 26.7
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 1.2e-11 75.5 115 41.7
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 4.5e-11 73.6 100 44.0
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 5.0e-10 70.1 235 25.1
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 4.0e-07 60.5 103 33.0


User provided reference genes

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