Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03645 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.7e-194 681.4 359 100.0
SEGI_30856 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 1.3e-122 443.7 238 98.7
SEGI_09820 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.5e-43 179.9 113 79.6
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 2.5e-33 147.1 245 45.7
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 1.6e-32 144.4 188 48.9
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 2.8e-32 143.7 202 45.0
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 6.3e-32 142.5 205 43.9
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 4.1e-31 139.8 202 42.6
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 5.3e-31 139.4 231 45.5
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 4.5e-30 136.3 235 41.7
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 2.9e-29 133.7 238 39.5
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 8.5e-29 132.1 247 38.9
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.1e-28 131.7 252 38.1
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 3.2e-28 130.2 218 39.9
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 5.5e-28 129.4 244 37.7
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 1.2e-27 128.3 206 41.7
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.2e-27 128.3 178 43.8
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 1.6e-27 127.9 189 43.9
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 1.6e-27 127.9 256 37.1
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 2.1e-27 127.5 200 41.5
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 3.6e-27 126.7 171 45.6
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 3.6e-27 126.7 202 41.6
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 4.6e-27 126.3 204 40.7
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 4.6e-27 126.3 152 52.0
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 4.6e-27 126.3 143 51.0
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 6.1e-27 125.9 202 45.0
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 6.1e-27 125.9 202 45.0
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 6.1e-27 125.9 225 40.4
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 7.9e-27 125.6 249 38.6
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 7.9e-27 125.6 240 38.8
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 7.9e-27 125.6 209 41.1
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 1.4e-26 124.8 225 39.6
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 1.4e-26 124.8 257 37.7
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 1.8e-26 124.4 230 38.7
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 3.0e-26 123.6 194 44.3
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 3.0e-26 123.6 194 44.3
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 3.0e-26 123.6 186 43.0
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 5.1e-26 122.9 201 39.8
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 6.7e-26 122.5 253 38.7
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 1.1e-25 121.7 263 37.3
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 2.0e-25 120.9 205 39.5
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 2.0e-25 120.9 251 37.1
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 2.0e-25 120.9 217 37.8
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 2.0e-25 120.9 141 52.5
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 5.7e-25 119.4 228 37.3
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 7.4e-25 119.0 229 39.3
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 7.4e-25 119.0 210 39.0
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 7.4e-25 119.0 197 41.6
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 9.7e-25 118.6 246 37.8
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 9.7e-25 118.6 232 39.7
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 9.7e-25 118.6 241 36.1
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 9.7e-25 118.6 232 39.7
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 1.3e-24 118.2 282 35.1
Aa31LG2G16170 Aethionema arabicum HOM05D004348 ORTHO05D006191 1.3e-24 118.2 189 40.7
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 1.7e-24 117.9 261 37.2
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 1.7e-24 117.9 104 58.7
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 1.7e-24 117.9 231 38.1
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 1.7e-24 117.9 273 37.4
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 2.2e-24 117.5 215 42.8
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 2.2e-24 117.5 119 58.8
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 2.8e-24 117.1 197 40.6
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 2.8e-24 117.1 257 37.0
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 3.7e-24 116.7 144 47.9
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 3.7e-24 116.7 268 35.8
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 4.8e-24 116.3 197 40.6
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 6.3e-24 115.9 143 48.3
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 6.3e-24 115.9 207 39.6
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 1.1e-23 115.2 139 51.1
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.4e-23 114.8 267 35.6
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 1.8e-23 114.4 273 36.6
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 1.8e-23 114.4 119 57.1
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 1.8e-23 114.4 235 37.9
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 2.4e-23 114.0 267 34.8
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 3.1e-23 113.6 221 39.4
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 5.3e-23 112.8 140 50.0
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 6.9e-23 112.5 140 49.3
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 2.6e-22 110.5 213 39.4
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 2.6e-22 110.5 230 37.4
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 3.4e-22 110.2 230 36.5
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 4.5e-22 109.8 230 36.5
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 7.7e-22 109.0 219 38.8
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 3.8e-21 106.7 224 37.9
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 1.4e-20 104.8 200 40.0
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 1.4e-20 104.8 206 40.3
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 2.5e-20 104.0 142 45.8
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 3.2e-20 103.6 207 39.6
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 3.2e-20 103.6 161 40.4
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 5.5e-20 102.8 224 34.8
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 7.2e-20 102.4 109 51.4
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 1.6e-19 101.3 208 38.5
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 2.7e-19 100.5 157 43.9
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 2.7e-19 100.5 233 35.6
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 1.1e-17 95.1 164 38.4
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 5.7e-17 92.8 199 37.7
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.8e-15 87.8 121 47.1
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 7.0e-15 85.9 141 41.8
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 7.0e-15 85.9 193 34.2
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 2.6e-14 84.0 193 36.8
SEGI_32035 Sequoiadendron giganteum HOM05D009513 ORTHO05D000002 1.0e-13 82.0 144 38.2
SEGI_07422 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.9e-13 80.5 179 34.1
SEGI_21220 Sequoiadendron giganteum HOM05D009513 ORTHO05D000002 5.5e-12 76.3 149 36.2
Atru.chr1.1667 Acer truncatum HOM05D004348 ORTHO05D006191 3.6e-11 73.6 100 45.0
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 6.1e-11 72.8 122 42.6
Mapoly0017s0011 Marchantia polymorpha HOM05D004348 ORTHO05D006191 2.3e-10 70.9 163 32.5
SEGI_10976 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.0e-10 70.5 145 33.8
SEGI_00887 Sequoiadendron giganteum HOM05D000104 ORTHO05D006071 5.2e-10 69.7 126 36.5
SEGI_31623 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 5.2e-10 69.7 104 42.3
SEGI_37755 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.8e-07 61.2 88 40.9
SEGI_09567 Sequoiadendron giganteum HOM05D000966 ORTHO05D004359 2.4e-07 60.8 123 39.8
CAN.G371.43 Capsicum annuum HOM05D004348 ORTHO05D006191 5.3e-07 59.7 162 34.6
SEGI_30071 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.2e-06 58.5 90 45.6
SEGI_37692 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.0e-06 57.8 111 39.6


User provided reference genes

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