Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03633 Sequoiadendron giganteum HOM05D021462 ORTHO05D012895 3.5e-129 464.9 229 100.0
SEGI_06722 Sequoiadendron giganteum HOM05D021462 ORTHO05D012895 2.4e-37 159.8 94 78.7
SEGI_17555 Sequoiadendron giganteum HOM05D021462 ORTHO05D012895 3.5e-36 156.0 93 78.5
SEGI_24531 Sequoiadendron giganteum HOM05D021462 ORTHO05D012895 3.0e-27 126.3 99 53.5
SEGI_09312 Sequoiadendron giganteum HOM05D021462 ORTHO05D012895 1.3e-14 84.3 87 46.0
SEGI_36883 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 6.0e-12 75.5 48 68.8
SEGI_20847 Sequoiadendron giganteum HOM05D021462 ORTHO05D012895 2.5e-10 70.1 67 46.3
VMungo0251G1094 Vigna mungo HOM05D000004 ORTHO05D000016 3.1e-08 63.2 161 29.2
TPR.G27441 Trifolium pratense HOM05D000014 ORTHO05D000016 6.9e-08 62.0 85 40.0
PSO210G1244 Papaver somniferum HOM05D000014 ORTHO05D000016 1.5e-07 60.8 82 39.0
VMungo0331G0483 Vigna mungo HOM05D009087 ORTHO05D000016 2.0e-07 60.5 101 36.6
VMungo0720G1022 Vigna mungo HOM05D000014 ORTHO05D000016 2.0e-07 60.5 95 34.7
PSO017G2550 Papaver somniferum HOM05D000014 ORTHO05D000016 3.4e-07 59.7 82 36.6
SEGI_12285 Sequoiadendron giganteum HOM05D000150 ORTHO05D000108 5.8e-07 58.9 74 39.2
FvH4_4g14130 Fragaria vesca HOM05D000014 ORTHO05D000093 7.6e-07 58.5 72 37.5
SEGI_36620 Sequoiadendron giganteum HOM05D012918 ORTHO05D012895 7.6e-07 58.5 81 32.1
PSO170G5595 Papaver somniferum HOM05D000014 ORTHO05D000016 9.9e-07 58.2 82 35.4
SEGI_03653 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 9.9e-07 58.2 70 31.4
Ca_04884_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.3e-06 57.8 70 37.1
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-06 57.8 137 29.9
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-06 57.8 137 29.9
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-06 57.8 137 29.9
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-06 57.8 137 29.9
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-06 57.8 137 29.9
TPR.G23123 Trifolium pratense HOM05D000014 ORTHO05D000016 1.7e-06 57.4 85 36.5
VMungo0540G1909 Vigna mungo HOM05D009087 ORTHO05D000016 1.7e-06 57.4 73 39.7
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 2.2e-06 57.0 73 41.1
VMungo0720G1585 Vigna mungo HOM05D009087 ORTHO05D000016 2.2e-06 57.0 73 39.7
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 2.9e-06 56.6 84 35.7
PSO339G5796 Papaver somniferum HOM05D000014 ORTHO05D000016 2.9e-06 56.6 75 37.3
TPR.G21512 Trifolium pratense HOM05D000014 ORTHO05D000016 2.9e-06 56.6 74 41.9
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 3.8e-06 56.2 84 35.7
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 3.8e-06 56.2 84 35.7
PSO674G0086 Papaver somniferum HOM05D000014 ORTHO05D000016 3.8e-06 56.2 75 37.3
Ca_23138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.9e-06 55.8 84 35.7
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 4.9e-06 55.8 84 35.7
PSO764G0254 Papaver somniferum HOM05D000014 ORTHO05D000016 4.9e-06 55.8 75 40.0
Ca_03019_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.4e-06 55.5 84 35.7
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 6.4e-06 55.5 83 38.6
PGR119G1189 Punica granatum HOM05D000014 ORTHO05D000093 6.4e-06 55.5 137 29.2
SEGI_25971 Sequoiadendron giganteum HOM05D012918 ORTHO05D012895 6.4e-06 55.5 96 33.3
Ca_05287_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 8.4e-06 55.1 81 35.8


User provided reference genes

Program Settings