Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03556 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 1.6e-67 259.2 129 100.0
SEGI_00448 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 5.3e-50 201.1 157 65.6
ATR0665G198 Amborella trichopoda HOM05D004548 ORTHO05D005402 1.2e-46 189.9 157 60.5
Migut.N00675 Erythranthe guttata HOM05D004548 ORTHO05D005402 7.5e-44 180.6 157 60.5
Eucgr.J01653 Eucalyptus grandis HOM05D004548 ORTHO05D005402 1.3e-43 179.9 158 58.9
Duzib187G0077 Durio zibethinus HOM05D004548 ORTHO05D005402 1.7e-43 179.5 157 58.6
HPP92_007039 Vanilla planifolia HOM05D004548 ORTHO05D005402 2.2e-43 179.1 157 59.2
ECA236G1448 Erigeron canadensis HOM05D004548 ORTHO05D005402 2.8e-43 178.7 109 75.2
MBI07_g42009_MAGBIO Magnolia biondii HOM05D004548 ORTHO05D005402 2.8e-43 178.7 109 78.0
Thecc.01G240000 Theobroma cacao HOM05D004548 ORTHO05D005402 2.8e-43 178.7 157 59.2
Gohir.D09G002300 Gossypium hirsutum HOM05D004548 ORTHO05D005402 3.7e-43 178.3 157 58.6
HanXRQChr04g0124971 Helianthus annuus HOM05D004548 ORTHO05D005402 6.3e-43 177.6 109 75.2
Gorai.006G002800 Gossypium raimondii HOM05D004548 ORTHO05D005402 8.2e-43 177.2 157 58.0
SGA_v2.0_scaffold77G25307 Striga asiatica HOM05D004548 ORTHO05D005402 8.2e-43 177.2 157 59.2
HPP92_007022 Vanilla planifolia HOM05D004548 ORTHO05D005402 1.1e-42 176.8 109 78.0
Gohir.A09G002500 Gossypium hirsutum HOM05D004548 ORTHO05D005402 1.4e-42 176.4 157 57.3
Phvul.004G160000 Phaseolus vulgaris HOM05D004548 ORTHO05D005402 1.8e-42 176.0 109 78.0
TAR374G1650 Trochodendron aralioides HOM05D004548 ORTHO05D005402 2.4e-42 175.6 157 58.0
MSTRG.17963 Avicennia marina HOM05D004548 ORTHO05D005402 3.1e-42 175.3 156 57.7
Lsat_1_v5_gn_5_6480 Lactuca sativa HOM05D004548 ORTHO05D005402 3.1e-42 175.3 109 74.3
Lsat_1_v5_gn_8_83161 Lactuca sativa HOM05D004548 ORTHO05D005402 3.1e-42 175.3 109 74.3
MD13G1133800 Malus domestica HOM05D004548 ORTHO05D005402 4.1e-42 174.9 109 75.2
Nn3g16208 Nelumbo nucifera HOM05D004548 ORTHO05D005402 4.1e-42 174.9 109 76.1
VMungo0464G1792 Vigna mungo HOM05D004548 ORTHO05D005402 7.0e-42 174.1 150 60.7
Glyma.09G186700 Glycine max HOM05D004548 ORTHO05D005402 9.1e-42 173.7 109 77.1
Manes.12G130500 Manihot esculenta HOM05D004548 ORTHO05D005402 9.1e-42 173.7 157 55.4
Nitab4.5_0001348g0030 Nicotiana tabacum HOM05D004548 ORTHO05D005402 1.2e-41 173.3 109 75.2
Potri.003G160500 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.2e-41 173.3 109 76.1
AT1G20050 Arabidopsis thaliana HOM05D004548 ORTHO05D005402 1.6e-41 172.9 109 75.2
CiPaw.06G111100 Carya illinoinensis HOM05D004548 ORTHO05D005402 1.6e-41 172.9 157 57.3
COL.COLO4_06519 Corchorus olitorius HOM05D004548 ORTHO05D005402 1.6e-41 172.9 153 58.2
Peaxi162Scf01242g00029 Petunia axillaris HOM05D004548 ORTHO05D005402 1.6e-41 172.9 109 74.3
Ciclev10029256m.g Citrus clementina HOM05D004548 ORTHO05D005402 2.0e-41 172.6 109 76.1
Lj2g0001774 Lotus japonicus HOM05D004548 ORTHO05D005402 2.0e-41 172.6 109 75.2
Nitab4.5_0007144g0020 Nicotiana tabacum HOM05D004548 ORTHO05D005402 2.0e-41 172.6 109 74.3
THA.LOC104807222 Tarenaya hassleriana HOM05D004548 ORTHO05D005402 2.0e-41 172.6 109 78.0
Zm00001eb334120 Zea mays HOM05D004548 ORTHO05D005402 2.0e-41 172.6 155 56.8
CARHR020520 Cardamine hirsuta HOM05D004548 ORTHO05D005402 2.7e-41 172.2 109 76.1
QL03p048368 Quercus lobata HOM05D004548 ORTHO05D005402 2.7e-41 172.2 157 56.1
TWI18G0021 Tripterygium wilfordii HOM05D004548 ORTHO05D005402 2.7e-41 172.2 109 75.2
Aa31LG7G10030 Aethionema arabicum HOM05D004548 ORTHO05D005402 3.5e-41 171.8 109 75.2
Thhalv10008732m.g Eutrema salsugineum HOM05D004548 ORTHO05D005402 3.5e-41 171.8 109 75.2
SGA_v2.0_scaffold95G28703 Striga asiatica HOM05D004548 ORTHO05D005402 3.5e-41 171.8 157 58.0
unitig_0.g417 Utricularia gibba HOM05D004548 ORTHO05D005402 3.5e-41 171.8 109 74.3
BcaC05g25903 Brassica carinata HOM05D004548 ORTHO05D005402 4.5e-41 171.4 109 74.3
Oeu058204.1 Olea europaea HOM05D004548 ORTHO05D005402 4.5e-41 171.4 157 56.7
Oeu058206.1 Olea europaea HOM05D004548 ORTHO05D005402 4.5e-41 171.4 157 56.7
CSS0047568 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 5.9e-41 171.0 157 57.3
Cfa019955 Carpinus fangiana HOM05D004548 ORTHO05D005402 5.9e-41 171.0 157 55.4
Sp1g17810 Schrenkiella parvula HOM05D004548 ORTHO05D005402 5.9e-41 171.0 109 74.3
Solyc06g082980.3 Solanum lycopersicum HOM05D004548 ORTHO05D005402 5.9e-41 171.0 109 71.6
Sopen06g034370 Solanum pennellii HOM05D004548 ORTHO05D005402 5.9e-41 171.0 109 71.6
Actinidia33989 Actinidia chinensis HOM05D004548 ORTHO05D005402 7.7e-41 170.6 109 75.2
BcaB03g14416 Brassica carinata HOM05D004548 ORTHO05D005402 7.7e-41 170.6 109 74.3
A07p16050 Brassica napus HOM05D004548 ORTHO05D005402 7.7e-41 170.6 109 74.3
BraA07t29333Z Brassica rapa HOM05D004548 ORTHO05D005402 7.7e-41 170.6 109 74.3
Carub.0001s1957 Capsella rubella HOM05D004548 ORTHO05D005402 7.7e-41 170.6 109 73.4
CANSAT80G0994 Cannabis sativa HOM05D004548 ORTHO05D005402 1.0e-40 170.2 109 73.4
AL1G32850 Arabidopsis lyrata HOM05D004548 ORTHO05D005402 1.3e-40 169.9 109 74.3
CAN.G874.37 Capsicum annuum HOM05D004548 ORTHO05D005402 1.3e-40 169.9 109 72.5
PGSC0003DMG400027684 Solanum tuberosum HOM05D004548 ORTHO05D005402 1.3e-40 169.9 109 70.6
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea HOM05D004548 ORTHO05D005402 1.7e-40 169.5 109 73.4
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea HOM05D004548 ORTHO05D005402 1.7e-40 169.5 109 73.4
A06p16180 Brassica napus HOM05D004548 ORTHO05D005402 1.7e-40 169.5 109 74.3
Os01g0103600 Oryza sativa ssp. japonica HOM05D004548 ORTHO05D005402 1.7e-40 169.5 156 56.4
Prupe.1G211800 Prunus persica HOM05D004548 ORTHO05D005402 1.7e-40 169.5 157 56.1
BcaB03g14346 Brassica carinata HOM05D004548 ORTHO05D005402 2.2e-40 169.1 109 73.4
C07p23420 Brassica napus HOM05D004548 ORTHO05D005402 2.9e-40 168.7 109 73.4
BolC7t42875H Brassica oleracea HOM05D004548 ORTHO05D005402 2.9e-40 168.7 109 73.4
BraA06t24724Z Brassica rapa HOM05D004548 ORTHO05D005402 2.9e-40 168.7 109 72.5
Ca_25508_v3 Cicer arietinum L. HOM05D004548 ORTHO05D005402 2.9e-40 168.7 158 57.0
Nn4g22076 Nelumbo nucifera HOM05D004548 ORTHO05D005402 2.9e-40 168.7 109 75.2
BolC5t30565H Brassica oleracea HOM05D004548 ORTHO05D005402 3.8e-40 168.3 109 72.5
Lj1A1122T48 Lonicera japonica HOM05D004548 ORTHO05D005402 5.0e-40 167.9 157 55.4
PGR119G2305 Punica granatum HOM05D004548 ORTHO05D005402 5.0e-40 167.9 109 74.3
Sed0003942 Sechium edule HOM05D004548 ORTHO05D005402 5.0e-40 167.9 157 52.2
Hund23298 Selenicereus undatus HOM05D004548 ORTHO05D005402 5.0e-40 167.9 109 72.5
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla HOM05D004548 ORTHO05D005402 6.5e-40 167.5 157 54.8
GSVIVG01025270001 Vitis vinifera HOM05D004548 ORTHO05D005402 8.5e-40 167.2 157 53.5
Rhsim12G0068000 Rhododendron simsii HOM05D004548 ORTHO05D005402 1.1e-39 166.8 157 52.9
SalBow3G2027 Salvia bowleyana HOM05D004548 ORTHO05D005402 1.1e-39 166.8 109 73.4
vmacro15975 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.1e-39 166.8 157 54.1
Atru.chr12.1469 Acer truncatum HOM05D004548 ORTHO05D005402 1.5e-39 166.4 157 56.1
Cc01_g15960 Coffea canephora HOM05D004548 ORTHO05D005402 2.5e-39 165.6 157 52.2
Aqoxy1G02233 Aquilegia oxysepala HOM05D004548 ORTHO05D005402 3.2e-39 165.2 109 71.6
ClCG07G012080 Citrullus lanatus HOM05D004548 ORTHO05D005402 4.2e-39 164.9 157 52.2
TPR.G38962 Trifolium pratense HOM05D004548 ORTHO05D005402 4.2e-39 164.9 109 72.5
CDE04G3258 Ceratophyllum demersum HOM05D004548 ORTHO05D005402 5.5e-39 164.5 155 54.2
TPR.G21858 Trifolium pratense HOM05D004548 ORTHO05D005402 5.5e-39 164.5 109 71.6
Sc17g0004750 Simmondsia chinensis HOM05D004548 ORTHO05D005402 7.2e-39 164.1 160 53.8
RcHm_v2.0_Chr4g0428441 Rosa chinensis HOM05D004548 ORTHO05D005402 9.4e-39 163.7 109 71.6
MELO3C017829.2 Cucumis melo HOM05D004548 ORTHO05D005402 1.2e-38 163.3 162 51.9
FvH4_4g22210 Fragaria vesca HOM05D004548 ORTHO05D005402 1.2e-38 163.3 109 72.5
Peaxi162Scf00235g00217 Petunia axillaris HOM05D004548 ORTHO05D005402 1.6e-38 162.9 109 68.8
CsaV3_4G002070 Cucumis sativus L. HOM05D004548 ORTHO05D005402 2.1e-38 162.5 157 51.6
Lalb_Chr14g0371281 Lupinus albus HOM05D004548 ORTHO05D005402 2.1e-38 162.5 109 71.6
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 2.7e-38 162.2 109 69.7
BcaB07g32020 Brassica carinata HOM05D004548 ORTHO05D005402 3.6e-38 161.8 110 72.7
Mapoly0026s0030 Marchantia polymorpha HOM05D004548 ORTHO05D005402 3.6e-38 161.8 107 69.2
FAN07G0049 Fragaria x ananassa HOM05D004548 ORTHO05D005402 6.1e-38 161.0 109 71.6
Medtr6g084920 Medicago truncatula HOM05D004548 ORTHO05D005402 8.0e-38 160.6 160 53.1
Hund18283 Selenicereus undatus HOM05D004548 ORTHO05D005402 1.4e-37 159.8 109 67.9
FAN12G2246 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.8e-37 159.5 109 70.6
FAN17G2493 Fragaria x ananassa HOM05D004548 ORTHO05D005402 1.8e-37 159.5 109 70.6
PSO675G5153 Papaver somniferum HOM05D004548 ORTHO05D005402 2.3e-37 159.1 109 67.9
DCAR_019172 Daucus carota HOM05D004548 ORTHO05D005402 4.0e-37 158.3 102 72.5
PSO541G3463 Papaver somniferum HOM05D004548 ORTHO05D005402 6.8e-37 157.5 109 67.0
Glyma.09G186900 Glycine max HOM05D004548 ORTHO05D005402 5.7e-36 154.5 109 66.1
MD16G1144400 Malus domestica HOM05D004548 ORTHO05D005402 5.7e-36 154.5 108 69.4
PGR119G0727 Punica granatum HOM05D004548 ORTHO05D005402 7.5e-36 154.1 109 64.2
BcaC05g25905 Brassica carinata HOM05D004548 ORTHO05D005402 2.2e-35 152.5 110 70.9
Psat1g039080 Pisum sativum HOM05D004548 ORTHO05D005402 2.2e-35 152.5 101 72.3
Pp3c9_19720 Physcomitrium patens HOM05D004548 ORTHO05D005402 2.8e-35 152.1 108 66.7
Glyma.09G186800 Glycine max HOM05D004548 ORTHO05D005402 4.8e-35 151.4 109 67.0
SMO196G0274 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 4.8e-35 151.4 109 64.2
TPR.G38981 Trifolium pratense HOM05D004548 ORTHO05D005402 6.3e-35 151.0 158 50.6
SMO119G0501 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 8.3e-35 150.6 103 69.9
Sabra01G0049300 Salix brachista HOM05D004548 ORTHO05D000739 5.4e-34 147.9 104 73.1
CSS0003180 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 9.1e-34 147.1 109 64.2
CSS0047688 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 9.1e-34 147.1 109 64.2
AagrBONN_evm.TU.Sc2ySwM_228.5752 Anthoceros agrestis HOM05D004548 ORTHO05D005402 2.7e-33 145.6 109 62.4
Ciclev10002435m.g Citrus clementina HOM05D004548 ORTHO05D005402 4.5e-33 144.8 109 64.2
AUR62011188 Chenopodium quinoa HOM05D004548 ORTHO05D005402 5.9e-33 144.4 109 59.6
EL10Ac8g18737 Beta vulgaris HOM05D004548 ORTHO05D005402 7.7e-33 144.1 157 45.9
Ciclev10029254m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.0e-32 143.7 109 63.3
AUR62013297 Chenopodium quinoa HOM05D004548 ORTHO05D005402 1.7e-32 142.9 109 58.7
Zm00001eb126960 Zea mays HOM05D004548 ORTHO05D005402 1.7e-32 142.9 109 60.6
Cfa009469 Carpinus fangiana HOM05D004548 ORTHO05D005402 1.9e-31 139.4 145 51.7
Ciclev10006027m.g Citrus clementina HOM05D004548 ORTHO05D005402 5.5e-31 137.9 109 53.2
BcaB03g14342 Brassica carinata HOM05D004548 ORTHO05D005402 1.0e-29 133.7 109 62.4
Oeu051508.1 Olea europaea HOM05D004548 ORTHO05D005402 1.8e-29 132.9 83 73.5
BcaB03g14411 Brassica carinata HOM05D004548 ORTHO05D005402 1.7e-27 126.3 109 60.6
Mapoly0072s0066 Marchantia polymorpha HOM05D004548 ORTHO05D005402 1.8e-26 122.9 112 54.5
COL.COLO4_05696 Corchorus olitorius HOM05D004548 ORTHO05D005402 3.3e-23 112.1 70 77.1
C05p18540 Brassica napus HOM05D004548 ORTHO05D005402 7.3e-23 110.9 117 52.1
vmacro04885 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.6e-22 109.8 136 47.8
EL10Ac8g18747 Beta vulgaris HOM05D004548 ORTHO05D005402 4.7e-22 108.2 109 44.0
EL10Ac8g18743 Beta vulgaris HOM05D004548 ORTHO05D005402 1.8e-21 106.3 109 43.1
Sabra03G0116700 Salix brachista HOM05D004548 ORTHO05D005402 1.8e-21 106.3 88 64.8
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 2.9e-19 99.0 157 39.5
Cre12.g557900 Chlamydomonas reinhardtii HOM05D004548 ORTHO05D005402 6.4e-19 97.8 104 44.2
BcaC05g25899 Brassica carinata HOM05D004548 ORTHO05D005402 5.4e-18 94.7 117 47.0
Actinidia09588 Actinidia chinensis HOM05D004548 ORTHO05D005402 1.7e-16 89.7 73 63.0
Ah.09g224580 Amaranthus hybridus HOM05D004548 ORTHO05D005402 7.3e-15 84.3 118 41.5
CBR_g55168 Chara braunii HOM05D004548 ORTHO05D005402 7.3e-15 84.3 78 50.0
Potri.001G070301 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.6e-14 83.2 42 83.3
Ah.14g079290 Amaranthus hybridus HOM05D004548 ORTHO05D005402 3.6e-14 82.0 71 57.7
Ah.16g106680 Amaranthus hybridus HOM05D004548 ORTHO05D005402 2.9e-11 72.4 79 50.6
FAN12G3080 Fragaria x ananassa HOM05D004548 ORTHO05D005402 3.7e-11 72.0 80 51.2
EL10Ac8g18746 Beta vulgaris HOM05D004548 ORTHO05D005402 6.4e-11 71.2 71 43.7
EL10Ac8g18744 Beta vulgaris HOM05D004548 ORTHO05D005402 3.2e-10 68.9 71 42.3
Nitab4.5_0000038g0240 Nicotiana tabacum HOM05D004548 ORTHO05D005402 2.7e-09 65.9 36 72.2
EL10Ac8g18745 Beta vulgaris HOM05D004548 ORTHO05D005402 1.3e-08 63.5 109 31.2
MELO3C030902.2 Cucumis melo HOM05D004548 ORTHO05D005402 1.9e-07 59.7 73 42.5


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