Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03546 Sequoiadendron giganteum HOM05D003138 ORTHO05D003789 2.1e-73 278.9 136 100.0
CDE07G0037 Ceratophyllum demersum HOM05D003138 ORTHO05D003789 1.3e-35 153.3 91 78.0
Atru.chr3.1022 Acer truncatum HOM05D003138 ORTHO05D003789 6.7e-35 151.0 91 75.8
Aqoxy35s001 Aquilegia oxysepala HOM05D003138 ORTHO05D003789 1.9e-34 149.4 91 74.7
Aqoxy6G02588 Aquilegia oxysepala HOM05D003138 ORTHO05D003789 1.9e-34 149.4 91 74.7
Sabra07G0003800 Salix brachista HOM05D003138 ORTHO05D003789 1.6e-33 146.4 91 72.5
ATR0739G017 Amborella trichopoda HOM05D003138 ORTHO05D003789 2.1e-33 146.0 91 71.4
TAR381G0750 Trochodendron aralioides HOM05D003138 ORTHO05D003789 8.2e-33 144.1 91 72.5
TAR381G1576 Trochodendron aralioides HOM05D003138 ORTHO05D003789 8.2e-33 144.1 91 72.5
Ciclev10025194m.g Citrus clementina HOM05D003138 ORTHO05D003789 2.4e-32 142.5 91 70.3
Potri.007G005300 Populus trichocarpa HOM05D003138 ORTHO05D003789 2.4e-32 142.5 91 71.4
Potri.014G005000 Populus trichocarpa HOM05D003138 ORTHO05D003789 2.4e-32 142.5 91 70.3
Lalb_Chr05g0213741 Lupinus albus HOM05D003138 ORTHO05D003789 3.1e-32 142.1 91 69.2
Lalb_Chr09g0323651 Lupinus albus HOM05D003138 ORTHO05D003789 3.1e-32 142.1 91 68.1
SalBow5G3758 Salvia bowleyana HOM05D003138 ORTHO05D003789 3.1e-32 142.1 93 71.0
SalBow5G4243 Salvia bowleyana HOM05D003138 ORTHO05D003789 3.1e-32 142.1 93 71.0
Actinidia16425 Actinidia chinensis HOM05D003138 ORTHO05D003789 4.0e-32 141.7 91 70.3
Manes.13G110800 Manihot esculenta HOM05D003138 ORTHO05D003789 4.0e-32 141.7 91 69.2
CSS0026901 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 5.3e-32 141.4 91 70.3
CSS0031065 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 5.3e-32 141.4 91 70.3
AagrBONN_evm.TU.Sc2ySwM_368.2478 Anthoceros agrestis HOM05D003138 ORTHO05D003789 6.9e-32 141.0 91 72.5
Haze_15275 Corylus avellana HOM05D003138 ORTHO05D003789 9.0e-32 140.6 93 66.7
Sed0009166 Sechium edule HOM05D003138 ORTHO05D003789 9.0e-32 140.6 91 67.0
AL7G13100 Arabidopsis lyrata HOM05D003138 ORTHO05D003789 1.2e-31 140.2 91 68.1
ClCG01G017650 Citrullus lanatus HOM05D003138 ORTHO05D003789 1.2e-31 140.2 91 68.1
Dinv26939 Davidia involucrata HOM05D003138 ORTHO05D003789 1.2e-31 140.2 91 70.3
Lj4C163T19 Lonicera japonica HOM05D003138 ORTHO05D003789 1.2e-31 140.2 91 70.3
Nn5g30613 Nelumbo nucifera HOM05D003138 ORTHO05D003789 1.2e-31 140.2 91 68.1
Hund13955 Selenicereus undatus HOM05D003138 ORTHO05D003789 1.2e-31 140.2 91 70.3
Cfa004138 Carpinus fangiana HOM05D003138 ORTHO05D003789 1.5e-31 139.8 91 68.1
Eucgr.I00696 Eucalyptus grandis HOM05D003138 ORTHO05D003789 1.5e-31 139.8 91 67.0
Oeu014252.1 Olea europaea HOM05D003138 ORTHO05D003789 1.5e-31 139.8 106 62.3
TAR625G1113 Trochodendron aralioides HOM05D003138 ORTHO05D003789 1.5e-31 139.8 91 70.3
Glyma.17G160300 Glycine max HOM05D003138 ORTHO05D003789 2.0e-31 139.4 91 68.1
RcHm_v2.0_Chr1g0384171 Rosa chinensis HOM05D003138 ORTHO05D003789 2.0e-31 139.4 91 70.3
RcHm_v2.0_Chr2g0108261 Rosa chinensis HOM05D003138 ORTHO05D003789 2.0e-31 139.4 91 70.3
Thhalv10024840m.g Eutrema salsugineum HOM05D003138 ORTHO05D003789 2.6e-31 139.0 92 66.3
Sc07g0000530 Simmondsia chinensis HOM05D003138 ORTHO05D003789 2.6e-31 139.0 91 67.0
arahy.Tifrunner.gnm1.ann1.GP9GZC Arachis hypogaea HOM05D003138 ORTHO05D003789 3.4e-31 138.7 91 65.9
MELO3C007642.2 Cucumis melo HOM05D003138 ORTHO05D003789 3.4e-31 138.7 91 67.0
Lj7A107G21 Lonicera japonica HOM05D003138 ORTHO05D003789 3.4e-31 138.7 91 67.0
Lalb_Chr16g0378901 Lupinus albus HOM05D003138 ORTHO05D003789 3.4e-31 138.7 91 65.9
Rhsim08G0093000 Rhododendron simsii HOM05D003138 ORTHO05D003789 3.4e-31 138.7 91 69.2
SGA_v2.0_scaffold15G07466 Striga asiatica HOM05D003138 ORTHO05D003789 3.4e-31 138.7 91 69.2
AT4G37670 Arabidopsis thaliana HOM05D003138 ORTHO05D003789 4.5e-31 138.3 91 68.1
MSTRG.3474 Avicennia marina HOM05D003138 ORTHO05D003789 4.5e-31 138.3 91 69.2
Sp7g35320 Schrenkiella parvula HOM05D003138 ORTHO05D003789 4.5e-31 138.3 91 67.0
Sed0018224 Sechium edule HOM05D003138 ORTHO05D003789 4.5e-31 138.3 91 65.9
BcaNung02076 Brassica carinata HOM05D003138 ORTHO05D003789 5.8e-31 137.9 91 67.0
BcaNung02080 Brassica carinata HOM05D003138 ORTHO05D003789 5.8e-31 137.9 91 67.0
Carub.0007s0260 Capsella rubella HOM05D003138 ORTHO05D003789 5.8e-31 137.9 91 67.0
Migut.L00418 Erythranthe guttata HOM05D003138 ORTHO05D003789 5.8e-31 137.9 91 70.3
Lsat_1_v5_gn_2_82660 Lactuca sativa HOM05D003138 ORTHO05D003789 5.8e-31 137.9 91 67.0
ECA238G1545 Erigeron canadensis HOM05D003138 ORTHO05D003789 7.6e-31 137.5 91 65.9
Hma1.2p1_0808F.1_g221660 Hydrangea macrophylla HOM05D003138 ORTHO05D003789 7.6e-31 137.5 91 67.0
PSO541G1195 Papaver somniferum HOM05D003138 ORTHO05D003789 1.0e-30 137.1 91 71.4
PSO675G5167 Papaver somniferum HOM05D003138 ORTHO05D003789 1.0e-30 137.1 91 71.4
GSVIVG01002386001 Vitis vinifera HOM05D003138 ORTHO05D003789 1.0e-30 137.1 91 68.1
C01p01500 Brassica napus HOM05D003138 ORTHO05D003789 1.3e-30 136.7 91 67.0
BolC1t00147H Brassica oleracea HOM05D003138 ORTHO05D003789 1.3e-30 136.7 91 67.0
Hma1.2p1_0852F.1_g228610 Hydrangea macrophylla HOM05D003138 ORTHO05D003789 1.3e-30 136.7 106 59.4
Mapoly0138s0041 Marchantia polymorpha HOM05D003138 ORTHO05D003789 1.3e-30 136.7 91 70.3
Phvul.003G234400 Phaseolus vulgaris HOM05D003138 ORTHO05D003789 1.3e-30 136.7 91 65.9
VMungo0251G0938 Vigna mungo HOM05D003138 ORTHO05D003789 1.3e-30 136.7 91 65.9
VMungo1215G1848 Vigna mungo HOM05D003138 ORTHO05D003789 1.3e-30 136.7 91 65.9
AL4G12540 Arabidopsis lyrata HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 67.0
A01p01350 Brassica napus HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 65.9
BraA01t00131Z Brassica rapa HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 65.9
CARHR246040 Cardamine hirsuta HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 65.9
CiPaw.01G003900 Carya illinoinensis HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 68.1
Oeu017637.1 Olea europaea HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 68.1
vmacro18022 Vaccinium macrocarpon HOM05D003138 ORTHO05D003789 1.7e-30 136.3 91 67.0
Aa31LG7G13900 Aethionema arabicum HOM05D003138 ORTHO05D003789 2.2e-30 136.0 91 65.9
AT2G22910 Arabidopsis thaliana HOM05D003138 ORTHO05D003789 2.2e-30 136.0 91 67.0
CANSAT01G2723 Cannabis sativa HOM05D003138 ORTHO05D003789 2.2e-30 136.0 91 67.0
Ca_24681_v3 Cicer arietinum L. HOM05D003138 ORTHO05D003789 2.2e-30 136.0 91 67.0
CsaV3_6G044190 Cucumis sativus L. HOM05D003138 ORTHO05D003789 2.2e-30 136.0 91 65.9
THA.LOC104804210 Tarenaya hassleriana HOM05D003138 ORTHO05D003789 2.2e-30 136.0 91 65.9
CAN.G1075.45 Capsicum annuum HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 65.9
AUR62007523 Chenopodium quinoa HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 65.9
DCAR_025812 Daucus carota HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 67.0
Duzib264G1098 Durio zibethinus HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 63.7
Migut.H00341 Erythranthe guttata HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 69.2
Glyma.01G194700 Glycine max HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 67.0
Nitab4.5_0004242g0020 Nicotiana tabacum HOM05D003138 ORTHO05D003789 2.9e-30 135.6 91 67.0
Gorai.011G108300 Gossypium raimondii HOM05D003138 ORTHO05D003789 3.8e-30 135.2 91 63.7
HanXRQChr14g0445291 Helianthus annuus HOM05D003138 ORTHO05D003789 3.8e-30 135.2 91 64.8
Lj4g0008440 Lotus japonicus HOM05D003138 ORTHO05D003789 3.8e-30 135.2 91 65.9
Phvul.002G010200 Phaseolus vulgaris HOM05D003138 ORTHO05D003789 3.8e-30 135.2 91 65.9
TWI23G0805 Tripterygium wilfordii HOM05D003138 ORTHO05D003789 3.8e-30 135.2 91 65.9
BcaNung02073 Brassica carinata HOM05D003138 ORTHO05D003789 4.9e-30 134.8 91 65.9
C07p62550 Brassica napus HOM05D003138 ORTHO05D003789 4.9e-30 134.8 91 65.9
BolC7t46670H Brassica oleracea HOM05D003138 ORTHO05D003789 4.9e-30 134.8 91 65.9
Gohir.A02G151100 Gossypium hirsutum HOM05D003138 ORTHO05D003789 4.9e-30 134.8 91 64.8
Gohir.A10G089500 Gossypium hirsutum HOM05D003138 ORTHO05D003789 4.9e-30 134.8 91 63.7
Sopen02g036840 Solanum pennellii HOM05D003138 ORTHO05D003789 4.9e-30 134.8 91 65.9
MSTRG.15346 Avicennia marina HOM05D003138 ORTHO05D003789 6.5e-30 134.4 91 67.0
Gohir.D10G098600 Gossypium hirsutum HOM05D003138 ORTHO05D003789 6.5e-30 134.4 91 63.7
Nitab4.5_0001417g0050 Nicotiana tabacum HOM05D003138 ORTHO05D003789 6.5e-30 134.4 91 65.9
Solyc02g092260.3 Solanum lycopersicum HOM05D003138 ORTHO05D003789 6.5e-30 134.4 91 65.9
PGSC0003DMG400021414 Solanum tuberosum HOM05D003138 ORTHO05D003789 6.5e-30 134.4 91 65.9
A03p65450 Brassica napus HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 65.9
BraA03t15597Z Brassica rapa HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 65.9
Cc07_g07170 Coffea canephora HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 68.1
Glyma.11G047200 Glycine max HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 64.8
PGR102G1221 Punica granatum HOM05D003138 ORTHO05D003789 8.4e-30 134.0 104 59.6
Hund16404 Selenicereus undatus HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 62.6
PGSC0003DMG400009061 Solanum tuberosum HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 67.0
Thecc.01G073500 Theobroma cacao HOM05D003138 ORTHO05D003789 8.4e-30 134.0 91 62.6
EL10Ac6g15613 Beta vulgaris HOM05D003138 ORTHO05D003789 1.1e-29 133.7 91 65.9
Carub.0004s0206 Capsella rubella HOM05D003138 ORTHO05D003789 1.1e-29 133.7 91 64.8
Gohir.D03G029200 Gossypium hirsutum HOM05D003138 ORTHO05D003789 1.1e-29 133.7 91 63.7
Gorai.003G030900 Gossypium raimondii HOM05D003138 ORTHO05D003789 1.1e-29 133.7 91 63.7
Sp4g01950 Schrenkiella parvula HOM05D003138 ORTHO05D003789 1.1e-29 133.7 91 64.8
Cpa.g.sc6.8 Carica papaya HOM05D003138 ORTHO05D003789 1.4e-29 133.3 91 68.1
Lj2g0010709 Lotus japonicus HOM05D003138 ORTHO05D003789 1.4e-29 133.3 91 61.5
HPP92_018181 Vanilla planifolia HOM05D003138 ORTHO05D003789 1.4e-29 133.3 93 66.7
Duzib147G0023 Durio zibethinus HOM05D003138 ORTHO05D003789 1.9e-29 132.9 91 61.5
Dinv04041 Davidia involucrata HOM05D003138 ORTHO05D003789 2.5e-29 132.5 91 68.1
Peaxi162Scf00548g00320 Petunia axillaris HOM05D003138 ORTHO05D003789 2.5e-29 132.5 91 65.9
Pp3c2_3880 Physcomitrium patens HOM05D003138 ORTHO05D003789 2.5e-29 132.5 91 67.0
Solyc03g043950.4 Solanum lycopersicum HOM05D003138 ORTHO05D003789 2.5e-29 132.5 91 64.8
Sopen03g007770 Solanum pennellii HOM05D003138 ORTHO05D003789 2.5e-29 132.5 91 64.8
Ah.03g140580 Amaranthus hybridus HOM05D003138 ORTHO05D003789 3.2e-29 132.1 91 65.9
FAN28G0014 Fragaria x ananassa HOM05D003138 ORTHO05D003789 3.2e-29 132.1 91 67.0
Nitab4.5_0000142g0190 Nicotiana tabacum HOM05D003138 ORTHO05D003789 3.2e-29 132.1 91 65.9
Psat2g171720 Pisum sativum HOM05D003138 ORTHO05D003789 3.2e-29 132.1 91 63.7
PGR004G0610 Punica granatum HOM05D003138 ORTHO05D003789 5.5e-29 131.3 91 65.9
Gohir.A11G214300 Gossypium hirsutum HOM05D003138 ORTHO05D003789 7.1e-29 131.0 91 62.6
MD02G1187100 Malus domestica HOM05D003138 ORTHO05D003789 7.1e-29 131.0 91 65.9
SHI29452 Sapria himalayana HOM05D003138 ORTHO05D003789 7.1e-29 131.0 92 64.1
Zm00001eb404710 Zea mays HOM05D003138 ORTHO05D003789 7.1e-29 131.0 90 67.8
arahy.Tifrunner.gnm1.ann1.U6I4YS Arachis hypogaea HOM05D003138 ORTHO05D003789 9.3e-29 130.6 101 59.4
AUR62004014 Chenopodium quinoa HOM05D003138 ORTHO05D003789 9.3e-29 130.6 91 64.8
Os03g0431200 Oryza sativa ssp. japonica HOM05D003138 ORTHO05D003789 9.3e-29 130.6 90 67.8
Prupe.6G219600 Prunus persica HOM05D003138 ORTHO05D003789 1.2e-28 130.2 91 63.7
CAN.G278.17 Capsicum annuum HOM05D003138 ORTHO05D003789 1.6e-28 129.8 91 63.7
FvH4_1g17820 Fragaria vesca HOM05D003138 ORTHO05D003789 1.6e-28 129.8 91 65.9
FAN19G1177 Fragaria x ananassa HOM05D003138 ORTHO05D003789 1.6e-28 129.8 91 65.9
FAN26G0633 Fragaria x ananassa HOM05D003138 ORTHO05D003789 1.6e-28 129.8 91 65.9
Nitab4.5_0013633g0020 Nicotiana tabacum HOM05D003138 ORTHO05D003789 2.7e-28 129.0 91 62.6
TPR.G21854 Trifolium pratense HOM05D003138 ORTHO05D003789 2.7e-28 129.0 91 63.7
Oeu013326.4 Olea europaea HOM05D003138 ORTHO05D003789 3.5e-28 128.6 91 65.9
Os07g0585600 Oryza sativa ssp. japonica HOM05D003138 ORTHO05D003789 3.5e-28 128.6 90 67.8
unitig_748.g8590 Utricularia gibba HOM05D003138 ORTHO05D003789 3.5e-28 128.6 91 63.7
Gorai.007G224300 Gossypium raimondii HOM05D003138 ORTHO05D003789 6.0e-28 127.9 91 61.5
MD15G1298200 Malus domestica HOM05D003138 ORTHO05D003789 6.0e-28 127.9 91 64.8
Medtr5g015300 Medicago truncatula HOM05D003138 ORTHO05D003789 6.0e-28 127.9 91 62.6
Peaxi162Scf00118g01810 Petunia axillaris HOM05D003138 ORTHO05D003789 7.9e-28 127.5 91 63.7
CBR_g45391 Chara braunii HOM05D003138 ORTHO05D003789 1.0e-27 127.1 91 62.6
Aa31LG6G14570 Aethionema arabicum HOM05D003138 ORTHO05D003789 1.8e-27 126.3 91 60.4
COL.COLO4_11585 Corchorus olitorius HOM05D003138 ORTHO05D003789 1.8e-27 126.3 91 60.4
SMO163G0034 Selaginella moellendorffii HOM05D003138 ORTHO05D003789 2.3e-27 125.9 91 62.6
Zm00001eb325850 Zea mays HOM05D003138 ORTHO05D003789 2.3e-27 125.9 90 65.6
CARHR114220 Cardamine hirsuta HOM05D003138 ORTHO05D003789 8.7e-27 124.0 91 63.7
CiPaw.01G003700 Carya illinoinensis HOM05D003138 ORTHO05D003789 1.5e-26 123.2 91 63.7
Thhalv10000095m.g Eutrema salsugineum HOM05D003138 ORTHO05D003789 3.3e-26 122.1 91 61.5
SMO298G0018 Selaginella moellendorffii HOM05D003138 ORTHO05D003789 9.7e-26 120.6 91 63.7
Gohir.D11G209100 Gossypium hirsutum HOM05D003138 ORTHO05D003789 2.2e-25 119.4 87 59.8
CSS0044411 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 6.3e-25 117.9 91 61.5
CSS0050461 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 6.3e-25 117.9 91 61.5
CAN.G99.5 Capsicum annuum HOM05D003138 ORTHO05D003418 1.8e-24 116.3 92 56.5
Mapoly0147s0030 Marchantia polymorpha HOM05D003138 ORTHO05D003789 3.4e-23 112.1 91 58.2
Sabra14G0000500 Salix brachista HOM05D003138 ORTHO05D003789 2.9e-22 109.0 86 59.3
FAN06G0169 Fragaria x ananassa HOM05D003138 ORTHO05D003789 4.6e-20 101.7 92 53.3
FvH4_7g16532 Fragaria vesca HOM05D003138 ORTHO05D003789 1.4e-19 100.1 92 52.2
SMO119G0424 Selaginella moellendorffii HOM05D003138 ORTHO05D003789 2.0e-15 86.3 50 72.0
ECA232G0816 Erigeron canadensis HOM05D003138 ORTHO05D003789 3.4e-15 85.5 55 69.1
CDE04G0724 Ceratophyllum demersum HOM05D003138 ORTHO05D003789 5.9e-15 84.7 44 86.4
RhsimUnG0137900 Rhododendron simsii HOM05D003138 ORTHO05D003789 1.0e-14 84.0 69 59.4
Prupe.1G259000 Prunus persica HOM05D003138 ORTHO05D003789 1.3e-14 83.6 93 49.5
SalBow3G1595 Salvia bowleyana HOM05D003138 ORTHO05D003789 1.3e-14 83.6 54 70.4
CAN.G186.25 Capsicum annuum HOM05D003138 ORTHO05D003789 3.8e-14 82.0 68 51.5
MCO14G281 Micromonas commoda HOM05D003138 ORTHO05D003789 3.8e-14 82.0 92 46.7
PRCOL_00005931 Prasinoderma coloniale HOM05D003138 ORTHO05D003789 1.1e-13 80.5 95 47.4
Cre02.g144800 Chlamydomonas reinhardtii HOM05D003138 ORTHO05D003789 9.4e-13 77.4 95 43.2
BcaNung02078 Brassica carinata HOM05D003138 ORTHO05D003789 2.0e-10 69.7 41 70.7
ECA232G2300 Erigeron canadensis HOM05D003138 ORTHO05D003789 2.2e-09 66.2 40 70.0
Lj7A106T18 Lonicera japonica HOM05D003138 ORTHO05D003789 3.7e-09 65.5 51 56.9
Manes.12G115300 Manihot esculenta HOM05D003138 ORTHO05D003789 2.9e-06 55.8 43 58.1


User provided reference genes

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