Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 0.0e+00 1267.7 624 100.0
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 2.0e-150 537.0 463 57.9
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 2.4e-148 530.0 461 59.0
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 5.4e-148 528.9 462 57.4
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 2.7e-147 526.6 460 57.0
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 4.6e-147 525.8 467 58.0
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 1.0e-146 524.6 460 57.4
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 3.9e-146 522.7 460 56.7
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 3.9e-146 522.7 459 58.2
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 6.6e-146 521.9 460 55.9
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 1.1e-145 521.2 461 57.3
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 1.5e-145 520.8 460 56.3
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 1.5e-145 520.8 459 57.5
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 1.9e-145 520.4 461 57.3
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 5.6e-145 518.8 461 56.2
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 5.6e-145 518.8 460 56.1
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 1.2e-144 517.7 460 57.4
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 1.6e-144 517.3 460 55.2
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 1.6e-144 517.3 459 57.3
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 2.8e-144 516.5 459 56.0
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 4.7e-144 515.8 461 55.7
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 6.2e-144 515.4 460 56.7
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 8.1e-144 515.0 460 56.7
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.4e-143 514.2 460 55.0
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 1.4e-143 514.2 471 54.6
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 1.4e-143 514.2 462 56.7
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 2.3e-143 513.5 482 54.4
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 2.3e-143 513.5 470 54.5
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 6.8e-143 511.9 473 55.2
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 6.8e-143 511.9 460 57.6
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 6.8e-143 511.9 465 55.9
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 8.9e-143 511.5 460 57.4
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 1.2e-142 511.1 425 58.4
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 3.4e-142 509.6 459 56.2
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 5.8e-142 508.8 461 55.5
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 7.6e-142 508.4 467 55.9
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 7.6e-142 508.4 461 55.3
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 1.3e-141 507.7 460 56.5
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 1.7e-141 507.3 465 55.5
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.2e-141 506.9 460 55.4
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.2e-141 506.9 460 55.4
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 2.9e-141 506.5 462 54.3
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 6.4e-141 505.4 461 55.5
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 8.3e-141 505.0 471 54.1
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 1.1e-140 504.6 462 55.0
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 1.4e-140 504.2 459 55.6
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 1.9e-140 503.8 432 57.4
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 1.9e-140 503.8 460 56.1
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 2.4e-140 503.4 458 54.6
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 3.2e-140 503.1 460 54.1
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 4.1e-140 502.7 475 53.7
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 9.2e-140 501.5 460 55.0
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 2.7e-139 500.0 495 51.9
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.5e-139 499.6 470 53.4
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 6.0e-139 498.8 461 54.4
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 6.0e-139 498.8 473 52.9
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 2.3e-138 496.9 462 54.3
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 2.3e-138 496.9 459 53.4
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 2.3e-138 496.9 459 53.4
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 2.3e-138 496.9 463 56.4
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 3.0e-138 496.5 463 54.0
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 3.9e-138 496.1 472 53.2
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 3.9e-138 496.1 482 53.5
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 3.9e-138 496.1 461 54.4
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 6.6e-138 495.4 461 54.9
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 2.5e-137 493.4 459 53.2
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 3.3e-137 493.0 459 54.9
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 7.3e-137 491.9 460 54.1
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 1.2e-136 491.1 460 54.6
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 1.6e-136 490.7 460 57.4
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 2.1e-136 490.3 457 53.8
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 3.6e-136 489.6 459 52.1
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 3.6e-136 489.6 460 55.9
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 8.1e-136 488.4 465 54.2
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 1.8e-135 487.3 464 55.6
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 5.2e-135 485.7 460 55.2
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 6.8e-135 485.3 460 56.7
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 6.8e-135 485.3 438 57.3
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 8.9e-135 485.0 460 55.7
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 8.9e-135 485.0 460 55.7
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 1.2e-134 484.6 423 59.1
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 2.0e-134 483.8 427 56.4
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 2.0e-134 483.8 460 55.0
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 2.0e-134 483.8 460 55.0
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 2.0e-134 483.8 472 51.9
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 2.0e-134 483.8 459 56.0
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 4.4e-134 482.6 460 51.7
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 9.9e-134 481.5 462 54.3
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 1.7e-133 480.7 461 53.6
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 4.2e-132 476.1 461 52.7
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 1.1e-129 468.0 461 53.4
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 1.9e-129 467.2 462 52.8
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 4.3e-129 466.1 462 52.4
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 4.8e-128 462.6 460 53.9
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 6.2e-128 462.2 461 51.6
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 1.3e-125 454.5 383 60.8
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 1.4e-124 451.1 380 56.6
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 9.0e-119 431.8 466 50.0
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 2.0e-118 430.6 458 50.7
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 2.9e-117 426.8 461 49.0
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 4.2e-116 422.9 336 60.4
Zm00001eb401890 Zea mays HOM05D006378 ORTHO05D007959 5.8e-110 402.5 381 53.3
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 7.7e-94 349.0 446 42.2
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 2.2e-93 347.4 461 44.3
CAN.G81.12 Capsicum annuum HOM05D006378 ORTHO05D007959 8.8e-74 282.3 308 51.9
FAN28G1488 Fragaria x ananassa HOM05D006378 ORTHO05D007959 8.3e-64 249.2 267 47.9
Psat7g020000 Pisum sativum HOM05D006378 ORTHO05D007959 1.4e-47 195.3 173 58.4
Actinidia38480 Actinidia chinensis HOM05D006378 ORTHO05D007959 7.8e-46 189.5 137 62.8
SHI02337 Sapria himalayana HOM05D006378 ORTHO05D007959 4.0e-26 124.0 150 42.7
RcHm_v2.0_Chr2g0095101 Rosa chinensis HOM05D006378 ORTHO05D007959 2.6e-17 94.7 88 51.1
SHI02336 Sapria himalayana HOM05D006378 ORTHO05D007959 1.4e-15 89.0 108 45.4
CAN.G81.11 Capsicum annuum HOM05D006378 ORTHO05D007959 3.3e-12 77.8 141 36.2
SHI02338 Sapria himalayana HOM05D006378 ORTHO05D007959 1.3e-08 65.9 64 50.0
CDE05G1577 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 2.1e-06 58.5 79 45.6


User provided reference genes

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