Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03448 Sequoiadendron giganteum HOM05D026604 ORTHO05D010247 5.3e-87 324.3 164 100.0
SEGI_09417 Sequoiadendron giganteum HOM05D013967 ORTHO05D010247 3.4e-17 92.4 104 50.0
SalBow7G2553 Salvia bowleyana HOM05D000054 ORTHO05D000171 4.9e-16 88.6 88 44.3
Gohir.A07G117800 Gossypium hirsutum HOM05D000054 ORTHO05D000286 1.9e-15 86.7 83 50.6
CSS0039618 Camellia sinensis var. sinensis HOM05D026604 ORTHO05D010247 5.4e-15 85.1 87 48.3
Thecc.06G134600 Theobroma cacao HOM05D000054 ORTHO05D000286 5.4e-15 85.1 88 47.7
Thecc.06G134900 Theobroma cacao HOM05D000054 ORTHO05D000286 9.2e-15 84.3 86 48.8
SEGI_37063 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 4.6e-14 82.0 85 52.9
CAN.G943.46 Capsicum annuum HOM05D000054 ORTHO05D000286 1.7e-13 80.1 88 45.5
CSS0045054 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D010247 3.0e-13 79.3 104 40.4
AUR62016382 Chenopodium quinoa HOM05D000054 ORTHO05D000171 3.9e-13 79.0 85 44.7
Rhsim04G0036300 Rhododendron simsii HOM05D000054 ORTHO05D000171 5.1e-13 78.6 109 39.4
MBI14_g17546_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 6.6e-13 78.2 65 55.4
MBI18_g46064_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D010247 6.6e-13 78.2 65 55.4
Aqoxy1G01465 Aquilegia oxysepala HOM05D000054 ORTHO05D000286 8.7e-13 77.8 77 46.8
Glyma.08G120302 Glycine max HOM05D000054 ORTHO05D000171 8.7e-13 77.8 83 43.4
TAR626G0314 Trochodendron aralioides HOM05D000054 ORTHO05D000286 1.5e-12 77.0 96 42.7
CAN.G943.47 Capsicum annuum HOM05D000054 ORTHO05D000286 1.9e-12 76.6 88 44.3
CSS0010864 Camellia sinensis var. sinensis HOM05D030223 ORTHO05D010247 9.6e-12 74.3 83 45.8
Haze_05415 Corylus avellana HOM05D000054 ORTHO05D000171 9.6e-12 74.3 80 43.8
CSS0032317 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D010247 1.6e-11 73.6 83 45.8
Gorai.011G052400 Gossypium raimondii HOM05D000054 ORTHO05D000286 2.1e-11 73.2 73 49.3
Rhsim06G0236400 Rhododendron simsii HOM05D000054 ORTHO05D000286 2.8e-11 72.8 80 43.8
Gohir.A10G048100 Gossypium hirsutum HOM05D000054 ORTHO05D000286 4.7e-11 72.0 78 44.9
Gorai.011G052100 Gossypium raimondii HOM05D000054 ORTHO05D000286 4.7e-11 72.0 78 44.9
BcaB04g20959 Brassica carinata HOM05D000054 ORTHO05D000171 6.2e-11 71.6 103 35.0
DCAR_005176 Daucus carota HOM05D000054 ORTHO05D000171 8.1e-11 71.2 86 40.7
Gorai.007G330000 Gossypium raimondii HOM05D000054 ORTHO05D000127 8.1e-11 71.2 99 41.4
Hma1.2p1_2310F.1_g319540 Hydrangea macrophylla HOM05D000054 ORTHO05D010247 8.1e-11 71.2 98 40.8
Eucgr.K01777 Eucalyptus grandis HOM05D000054 ORTHO05D000171 1.1e-10 70.9 88 43.2
Gohir.A10G048300 Gossypium hirsutum HOM05D000054 ORTHO05D000286 1.4e-10 70.5 70 50.0
ATR0763G177 Amborella trichopoda HOM05D013967 ORTHO05D010247 4.0e-10 68.9 58 51.7
HanXRQChr04g0123581 Helianthus annuus HOM05D000054 ORTHO05D010247 6.9e-10 68.2 88 37.5
GSVIVG01021277001 Vitis vinifera HOM05D030223 ORTHO05D010247 6.9e-10 68.2 71 45.1
CARHR029070 Cardamine hirsuta HOM05D000054 ORTHO05D000171 9.0e-10 67.8 91 44.0
MD05G1295000 Malus domestica HOM05D000054 ORTHO05D002584 1.5e-09 67.0 84 40.5
Os04g0616400 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000286 1.5e-09 67.0 68 45.6
Os04g0616700 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000171 1.5e-09 67.0 68 44.1
ATR0763G021 Amborella trichopoda HOM05D000054 ORTHO05D000286 2.0e-09 66.6 68 44.1
HanXRQChr08g0224851 Helianthus annuus HOM05D003486 ORTHO05D010247 2.0e-09 66.6 83 41.0
Gorai.011G052000 Gossypium raimondii HOM05D000054 ORTHO05D000286 2.6e-09 66.2 78 42.3
Rhsim02G0089100 Rhododendron simsii HOM05D000054 ORTHO05D000171 3.4e-09 65.9 74 44.6
Sabra11G0060300 Salix brachista HOM05D000054 ORTHO05D010247 3.4e-09 65.9 84 44.0
DCAR_017752 Daucus carota HOM05D000054 ORTHO05D000171 5.8e-09 65.1 76 42.1
CSS0036413 Camellia sinensis var. sinensis HOM05D035543 ORTHO05D002584 7.6e-09 64.7 96 38.5
Gohir.A10G047633 Gossypium hirsutum HOM05D000054 ORTHO05D000286 1.7e-08 63.5 78 39.7
Os04g0616500 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000286 2.2e-08 63.2 68 45.6
CSS0019456 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 2.9e-08 62.8 76 43.4
Potri.011G073166 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.1e-07 60.8 83 39.8
Rhsim02G0089700 Rhododendron simsii HOM05D000054 ORTHO05D000171 1.1e-07 60.8 74 40.5
TWI38G2401 Tripterygium wilfordii HOM05D000054 ORTHO05D051487 1.1e-07 60.8 88 35.2
GSVIVG01029728001 Vitis vinifera HOM05D013967 ORTHO05D010247 1.1e-07 60.8 58 48.3
Lsat_1_v5_gn_7_26780 Lactuca sativa HOM05D000054 ORTHO05D000171 1.4e-07 60.5 84 40.5
Prupe.6G126100 Prunus persica HOM05D000054 ORTHO05D000171 1.4e-07 60.5 88 36.4
Sabra11G0094000 Salix brachista HOM05D026604 ORTHO05D010247 1.4e-07 60.5 72 50.0
FAN02G4105 Fragaria x ananassa HOM05D000517 ORTHO05D003374 1.9e-07 60.1 105 34.3
FAN05G3015 Fragaria x ananassa HOM05D000517 ORTHO05D003374 1.9e-07 60.1 105 34.3
FAN05G5189 Fragaria x ananassa HOM05D000517 ORTHO05D003374 1.9e-07 60.1 105 34.3
Potri.011G073241 Populus trichocarpa HOM05D000054 ORTHO05D000171 1.9e-07 60.1 80 41.2
C09p25650 Brassica napus HOM05D000054 ORTHO05D000286 2.4e-07 59.7 52 51.9
Nitab4.5_0013354g0010 Nicotiana tabacum HOM05D000054 ORTHO05D000171 2.4e-07 59.7 130 34.6
Eucgr.F04177 Eucalyptus grandis HOM05D000054 ORTHO05D000171 3.2e-07 59.3 71 43.7
FvH4_6g20300 Fragaria vesca HOM05D000517 ORTHO05D003374 3.2e-07 59.3 102 34.3
FAN14G5195 Fragaria x ananassa HOM05D000517 ORTHO05D003374 3.2e-07 59.3 102 34.3
PSO339G0122 Papaver somniferum HOM05D000054 ORTHO05D000286 3.2e-07 59.3 91 35.2
RcHm_v2.0_Chr5g0029821 Rosa chinensis HOM05D030223 ORTHO05D010247 3.2e-07 59.3 67 44.8
SalBow8G1064 Salvia bowleyana HOM05D017786 ORTHO05D019760 3.2e-07 59.3 59 45.8
TAR624G0357 Trochodendron aralioides HOM05D000054 ORTHO05D000171 3.2e-07 59.3 81 32.1
COL.COLO4_24634 Corchorus olitorius HOM05D000029 ORTHO05D006810 4.2e-07 58.9 98 37.8
FAN09G1509 Fragaria x ananassa HOM05D000517 ORTHO05D003374 4.2e-07 58.9 105 33.3
Lj2A339T47 Lonicera japonica HOM05D000054 ORTHO05D000171 4.2e-07 58.9 62 45.2
Rhsim02G0088700 Rhododendron simsii HOM05D000054 ORTHO05D000171 4.2e-07 58.9 70 44.3
Sabra11G0094600 Salix brachista HOM05D026604 ORTHO05D010247 4.2e-07 58.9 72 43.1
Gorai.001G131900 Gossypium raimondii HOM05D000054 ORTHO05D000286 5.4e-07 58.5 41 63.4
Lj2g0014060 Lotus japonicus HOM05D000053 ORTHO05D000448 5.4e-07 58.5 97 29.9
C05p52370 Brassica napus HOM05D000054 ORTHO05D039060 7.1e-07 58.2 74 39.2
BraA09t37635Z Brassica rapa HOM05D013967 ORTHO05D010247 7.1e-07 58.2 54 48.1
Nitab4.5_0013701g0010 Nicotiana tabacum HOM05D000054 ORTHO05D000171 7.1e-07 58.2 84 41.7
Rhsim02G0089500 Rhododendron simsii HOM05D000054 ORTHO05D000171 7.1e-07 58.2 73 39.7
HanXRQChr09g0258651 Helianthus annuus HOM05D000054 ORTHO05D000171 9.3e-07 57.8 121 35.5
Sed0026424 Sechium edule HOM05D000054 ORTHO05D000171 9.3e-07 57.8 57 45.6
DCAR_004041 Daucus carota HOM05D000054 ORTHO05D000171 1.2e-06 57.4 84 35.7
ECA248G0995 Erigeron canadensis HOM05D000054 ORTHO05D000171 1.2e-06 57.4 83 38.6
CSS0024277 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 1.6e-06 57.0 76 42.1
Solyc02g071820.4 Solanum lycopersicum HOM05D000054 ORTHO05D000171 1.6e-06 57.0 80 38.8
Sopen02g020810 Solanum pennellii HOM05D000054 ORTHO05D000171 1.6e-06 57.0 80 38.8
Rhsim02G0088800 Rhododendron simsii HOM05D000054 ORTHO05D000171 2.1e-06 56.6 74 40.5
MBI18_g31328_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D010247 2.7e-06 56.2 85 34.1
Sabra11G0060200 Salix brachista HOM05D000054 ORTHO05D000171 2.7e-06 56.2 87 31.0
BcaC06g35460 Brassica carinata HOM05D000054 ORTHO05D000171 3.5e-06 55.8 106 31.1
Gohir.A01G048751 Gossypium hirsutum HOM05D000054 ORTHO05D000171 3.5e-06 55.8 79 39.2
MBI06_g10743_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 4.6e-06 55.5 68 38.2
QL04p065535 Quercus lobata HOM05D000054 ORTHO05D000286 4.6e-06 55.5 90 34.4
Lj3g0020164 Lotus japonicus HOM05D000071 ORTHO05D000029 6.0e-06 55.1 87 35.6
Duzib213G0491 Durio zibethinus HOM05D000054 ORTHO05D000171 7.8e-06 54.7 80 37.5


User provided reference genes

Program Settings