Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03438 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 1.8e-58 231.5 112 100.0
SEGI_11799 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 2.9e-32 144.4 70 100.0
SEGI_36951 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 4.6e-22 110.5 93 54.8
SEGI_08205 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 1.1e-20 105.9 89 59.6
SEGI_22559 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 7.4e-20 103.2 84 61.9
SEGI_28461 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.4e-20 103.2 90 57.8
SEGI_14951 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 4.9e-16 90.5 80 56.2
SEGI_27590 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 8.4e-16 89.7 86 50.0
MBI11_g19575_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 2.5e-15 88.2 91 44.0
SEGI_18390 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 7.1e-15 86.7 83 55.4
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 9.3e-15 86.3 91 42.9
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 1.2e-14 85.9 91 45.1
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 1.2e-14 85.9 91 41.8
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 7.9e-14 83.2 92 42.4
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 7.9e-14 83.2 92 42.4
CAN.G78.130 Capsicum annuum HOM05D003900 ORTHO05D005009 7.9e-14 83.2 91 40.7
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 7.9e-14 83.2 91 42.9
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 1.0e-13 82.8 91 40.7
Cc02_g38560 Coffea canephora HOM05D003900 ORTHO05D005009 2.3e-13 81.6 93 40.9
Dinv43863 Davidia involucrata HOM05D003900 ORTHO05D005009 2.3e-13 81.6 91 41.8
SGA_v2.0_scaffold4G02283 Striga asiatica HOM05D003900 ORTHO05D005009 2.3e-13 81.6 88 42.0
vmacro13229 Vaccinium macrocarpon HOM05D003900 ORTHO05D005009 2.3e-13 81.6 91 44.0
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.0e-13 81.3 93 39.8
CiPaw.01G067200 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.0e-13 81.3 93 40.9
CiPaw.01G067300 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.0e-13 81.3 91 40.7
ATR0721G158 Amborella trichopoda HOM05D003900 ORTHO05D005009 3.9e-13 80.9 104 40.4
CiPaw.01G067500 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.1e-13 80.5 93 40.9
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 5.1e-13 80.5 91 41.8
Gohir.D12G110200 Gossypium hirsutum HOM05D003900 ORTHO05D005009 6.7e-13 80.1 88 40.9
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 6.7e-13 80.1 91 41.8
Nn1g01685 Nelumbo nucifera HOM05D003900 ORTHO05D005009 8.7e-13 79.7 91 41.8
Gorai.008G119500 Gossypium raimondii HOM05D003900 ORTHO05D005009 1.1e-12 79.3 88 40.9
SEGI_07366 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 1.1e-12 79.3 72 58.3
SEGI_07919 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 1.1e-12 79.3 70 57.1
SEGI_34583 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 1.1e-12 79.3 72 58.3
PSO384G0446 Papaver somniferum HOM05D003900 ORTHO05D005009 1.5e-12 79.0 91 41.8
Peaxi162Scf00020g00155 Petunia axillaris HOM05D003900 ORTHO05D005009 1.5e-12 79.0 91 41.8
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.9e-12 78.6 93 39.8
Gohir.A12G106900 Gossypium hirsutum HOM05D003900 ORTHO05D005009 1.9e-12 78.6 88 40.9
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 1.9e-12 78.6 91 39.6
Duzib133G1046 Durio zibethinus HOM05D003900 ORTHO05D005009 2.5e-12 78.2 88 44.3
Duzib138G1643 Durio zibethinus HOM05D003900 ORTHO05D005009 4.3e-12 77.4 86 41.9
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 7.4e-12 76.6 92 41.3
Lalb_Chr04g0259301 Lupinus albus HOM05D003900 ORTHO05D005009 7.4e-12 76.6 91 41.8
PSO266G0010 Papaver somniferum HOM05D003900 ORTHO05D005009 7.4e-12 76.6 91 41.8
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 7.4e-12 76.6 93 38.7
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 9.7e-12 76.3 93 38.7
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 9.7e-12 76.3 93 39.8
Prupe.2G177500 Prunus persica HOM05D003900 ORTHO05D005009 2.2e-11 75.1 93 40.9
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 2.8e-11 74.7 91 39.6
Actinidia20162 Actinidia chinensis HOM05D003900 ORTHO05D005009 3.7e-11 74.3 92 41.3
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 3.7e-11 74.3 93 36.6
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 4.8e-11 73.9 93 41.9
MD01G1071400 Malus domestica HOM05D003900 ORTHO05D005009 4.8e-11 73.9 93 37.6
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 4.8e-11 73.9 88 38.6
AT3G61520 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.3e-11 73.6 91 41.8
AT5G28370 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.3e-11 73.6 91 41.8
AT5G28460 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.3e-11 73.6 91 41.8
SEGI_36939 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 8.2e-11 73.2 76 50.0
Haze_15564 Corylus avellana HOM05D003900 ORTHO05D005009 1.1e-10 72.8 93 38.7
Psat7g005640 Pisum sativum HOM05D003900 ORTHO05D005009 1.4e-10 72.4 91 40.7
MD07G1131300 Malus domestica HOM05D003900 ORTHO05D005009 1.8e-10 72.0 93 35.5
Atru.chr5.563 Acer truncatum HOM05D003900 ORTHO05D005009 2.4e-10 71.6 91 41.8
Atru.chr5.581 Acer truncatum HOM05D003900 ORTHO05D005009 2.4e-10 71.6 91 41.8
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.4e-10 71.6 93 37.6
Medtr8g098755 Medicago truncatula HOM05D003900 ORTHO05D005009 2.4e-10 71.6 91 40.7
Thecc.01G352500 Theobroma cacao HOM05D003900 ORTHO05D005009 2.4e-10 71.6 91 40.7
Eucgr.E00097 Eucalyptus grandis HOM05D003900 ORTHO05D005009 3.1e-10 71.2 112 33.9
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 4.1e-10 70.9 91 39.6
SEGI_05660 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 4.1e-10 70.9 62 58.1
SEGI_13780 Sequoiadendron giganteum HOM05D001782 ORTHO05D001565 4.1e-10 70.9 67 55.2
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 5.3e-10 70.5 93 37.6
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 5.3e-10 70.5 91 34.1
AL5G43880 Arabidopsis lyrata HOM05D003900 ORTHO05D005009 6.9e-10 70.1 89 39.3
CARHR171850 Cardamine hirsuta HOM05D003900 ORTHO05D005009 9.0e-10 69.7 89 40.4
MELO3C029134.2 Cucumis melo HOM05D003900 ORTHO05D005009 9.0e-10 69.7 94 38.3
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 1.2e-09 69.3 91 39.6
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 1.5e-09 68.9 86 39.5
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 1.5e-09 68.9 85 37.6
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 2.0e-09 68.6 94 38.3
DCAR_025213 Daucus carota HOM05D003900 ORTHO05D005009 2.0e-09 68.6 80 38.8
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 2.0e-09 68.6 85 36.5
SEGI_36720 Sequoiadendron giganteum HOM05D003900 ORTHO05D005009 4.5e-09 67.4 90 41.1
VMungo0251G1173 Vigna mungo HOM05D003900 ORTHO05D005009 4.5e-09 67.4 95 36.8
Ah.15g096610 Amaranthus hybridus HOM05D003900 ORTHO05D005009 5.9e-09 67.0 91 36.3
SEGI_06168 Sequoiadendron giganteum HOM05D028618 ORTHO05D005009 7.7e-09 66.6 71 49.3
BcaB02g07375 Brassica carinata HOM05D003900 ORTHO05D005009 1.0e-08 66.2 91 36.3
Medtr3g088810 Medicago truncatula HOM05D003900 ORTHO05D005009 1.3e-08 65.9 91 39.6
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 1.7e-08 65.5 86 37.2
SEGI_05946 Sequoiadendron giganteum HOM05D003900 ORTHO05D050885 2.2e-08 65.1 93 40.9
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 2.2e-08 65.1 91 31.9
C06p27530 Brassica napus HOM05D003900 ORTHO05D005009 2.9e-08 64.7 92 35.9
BolC6t37920H Brassica oleracea HOM05D003900 ORTHO05D005009 2.9e-08 64.7 92 35.9
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 2.9e-08 64.7 89 33.7
ECA236G1505 Erigeron canadensis HOM05D003900 ORTHO05D005009 2.9e-08 64.7 89 37.1
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 2.9e-08 64.7 90 35.6
BcaC08g45129 Brassica carinata HOM05D003900 ORTHO05D005009 3.8e-08 64.3 92 35.9
A07p25540 Brassica napus HOM05D003900 ORTHO05D005009 3.8e-08 64.3 90 36.7
COL.COLO4_12777 Corchorus olitorius HOM05D003900 ORTHO05D005009 3.8e-08 64.3 88 36.4
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 8.5e-08 63.2 89 36.0
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.5e-08 63.2 88 34.1
Lj4g0005982 Lotus japonicus HOM05D003900 ORTHO05D005009 1.1e-07 62.8 91 36.3
SEGI_23216 Sequoiadendron giganteum HOM05D028618 ORTHO05D005009 1.1e-07 62.8 74 44.6
BraA07t30195Z Brassica rapa HOM05D003900 ORTHO05D005009 1.9e-07 62.0 90 35.6
Thecc.01G038900 Theobroma cacao HOM05D000891 ORTHO05D000761 2.5e-07 61.6 97 36.1
Ah.03g139350 Amaranthus hybridus HOM05D000891 ORTHO05D000761 4.2e-07 60.8 113 30.1
CDE10G0308 Ceratophyllum demersum HOM05D003834 ORTHO05D004483 4.2e-07 60.8 72 38.9
Atru.chr3.547 Acer truncatum HOM05D000891 ORTHO05D000761 1.2e-06 59.3 93 36.6
Lj5g0003792 Lotus japonicus HOM05D000424 ORTHO05D000355 1.6e-06 58.9 103 32.0
Sabra07G0066600 Salix brachista HOM05D003039 ORTHO05D009478 1.6e-06 58.9 98 31.6
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 1.6e-06 58.9 91 34.1
SEGI_10842 Sequoiadendron giganteum HOM05D028618 ORTHO05D005009 1.6e-06 58.9 57 49.1
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 2.1e-06 58.5 78 41.0
Cfa003873 Carpinus fangiana HOM05D003900 ORTHO05D005009 2.1e-06 58.5 104 34.6
ClCG06G008020 Citrullus lanatus HOM05D007145 ORTHO05D008952 2.1e-06 58.5 100 33.0
Nitab4.5_0009560g0010 Nicotiana tabacum HOM05D003039 ORTHO05D009478 2.7e-06 58.2 97 34.0
MELO3C017551.2 Cucumis melo HOM05D000891 ORTHO05D000761 4.6e-06 57.4 113 34.5
SGA_v2.0_scaffold5G02672 Striga asiatica HOM05D000424 ORTHO05D000355 4.6e-06 57.4 82 32.9
VMungo0647G1609 Vigna mungo HOM05D002453 ORTHO05D002107 4.6e-06 57.4 95 30.5
Zm00001eb007190 Zea mays HOM05D003039 ORTHO05D009478 6.1e-06 57.0 102 32.4
Nitab4.5_0008410g0010 Nicotiana tabacum HOM05D003039 ORTHO05D009478 7.9e-06 56.6 97 33.0
SGA_v2.0_scaffold7G04017 Striga asiatica HOM05D003039 ORTHO05D009478 7.9e-06 56.6 99 29.3


User provided reference genes

Program Settings