Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 2.2e-139 498.8 234 100.0
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 9.1e-32 141.4 121 54.5
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 2.6e-31 139.8 148 47.3
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 3.5e-31 139.4 120 53.3
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 3.5e-31 139.4 116 57.8
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 3.5e-31 139.4 116 57.8
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 7.7e-31 138.3 157 43.3
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 7.7e-31 138.3 142 49.3
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 1.0e-30 137.9 116 56.9
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 2.9e-30 136.3 136 49.3
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 2.9e-30 136.3 116 56.9
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 5.0e-30 135.6 113 57.5
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 6.5e-30 135.2 120 52.5
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 8.5e-30 134.8 123 52.0
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 8.5e-30 134.8 122 52.5
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 1.1e-29 134.4 118 55.1
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 1.1e-29 134.4 123 52.0
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 1.1e-29 134.4 115 57.4
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 1.1e-29 134.4 117 55.6
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 1.1e-29 134.4 116 55.2
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 1.9e-29 133.7 123 52.8
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 1.9e-29 133.7 116 53.4
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 1.9e-29 133.7 122 51.6
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 2.5e-29 133.3 123 50.4
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 2.5e-29 133.3 122 53.3
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 3.2e-29 132.9 123 51.2
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 5.5e-29 132.1 113 55.8
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 5.5e-29 132.1 113 56.6
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 5.5e-29 132.1 119 54.6
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 5.5e-29 132.1 121 51.2
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 5.5e-29 132.1 122 52.5
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 7.2e-29 131.7 152 43.4
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 9.4e-29 131.3 122 52.5
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 9.4e-29 131.3 119 54.6
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 1.2e-28 131.0 128 50.8
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 1.2e-28 131.0 116 55.2
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 1.2e-28 131.0 163 41.7
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 2.1e-28 130.2 122 50.8
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 2.1e-28 130.2 136 48.5
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 2.1e-28 130.2 116 51.7
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.1e-28 130.2 120 50.8
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 2.7e-28 129.8 144 44.4
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 2.7e-28 129.8 118 51.7
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 4.7e-28 129.0 113 54.9
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 4.7e-28 129.0 119 54.6
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 4.7e-28 129.0 125 51.2
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 4.7e-28 129.0 115 53.0
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 4.7e-28 129.0 115 53.0
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 6.1e-28 128.6 118 52.5
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 6.1e-28 128.6 137 46.7
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 6.1e-28 128.6 121 50.4
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 8.0e-28 128.3 115 53.0
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 8.0e-28 128.3 153 43.8
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 8.0e-28 128.3 124 53.2
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 8.0e-28 128.3 124 53.2
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 1.0e-27 127.9 144 43.8
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 1.0e-27 127.9 144 43.8
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 1.0e-27 127.9 144 43.8
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 1.0e-27 127.9 123 52.8
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 1.4e-27 127.5 124 52.4
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 1.8e-27 127.1 116 51.7
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 1.8e-27 127.1 128 49.2
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 1.8e-27 127.1 123 49.6
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 1.8e-27 127.1 123 49.6
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 2.3e-27 126.7 121 50.4
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 3.0e-27 126.3 113 53.1
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 4.0e-27 125.9 116 52.6
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 4.0e-27 125.9 121 49.6
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 4.0e-27 125.9 122 49.2
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 4.0e-27 125.9 120 50.8
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 5.2e-27 125.6 121 49.6
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 8.8e-27 124.8 116 51.7
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 8.8e-27 124.8 123 48.8
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 1.2e-26 124.4 141 44.0
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 1.2e-26 124.4 116 50.9
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 2.0e-26 123.6 126 47.6
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 2.0e-26 123.6 141 43.3
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 2.0e-26 123.6 144 43.1
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 2.6e-26 123.2 141 43.3
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 2.6e-26 123.2 141 43.3
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 2.6e-26 123.2 113 54.0
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 2.6e-26 123.2 116 50.9
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 2.6e-26 123.2 122 50.0
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 3.3e-26 122.9 111 53.2
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 3.3e-26 122.9 127 48.0
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 4.4e-26 122.5 116 51.7
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 4.4e-26 122.5 125 50.4
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 9.7e-26 121.3 113 53.1
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.7e-25 120.6 141 41.8
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 1.7e-25 120.6 122 46.7
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 2.2e-25 120.2 113 51.3
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 2.2e-25 120.2 123 48.8
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 3.7e-25 119.4 129 45.7
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 3.7e-25 119.4 111 49.5
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 3.7e-25 119.4 113 50.4
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 4.8e-25 119.0 113 50.4
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 6.3e-25 118.6 122 45.1
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 1.1e-24 117.9 118 50.8
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 1.4e-24 117.5 113 51.3
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 2.0e-23 113.6 111 51.4
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 2.0e-23 113.6 124 45.2
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 3.5e-23 112.8 109 50.5
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 2.9e-22 109.8 124 45.2
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 2.9e-22 109.8 115 48.7
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 8.5e-22 108.2 105 51.4
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 5.5e-21 105.5 88 59.1
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 2.1e-20 103.6 88 58.0
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 6.1e-20 102.1 101 48.5
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 1.4e-19 100.9 121 43.0
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 2.2e-17 93.6 148 37.8
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 1.8e-16 90.5 72 59.7
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 3.0e-11 73.2 78 44.9
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 4.4e-10 69.3 41 75.6
Nn5g29163 Nelumbo nucifera HOM05D002857 ORTHO05D008347 3.8e-06 56.2 35 68.6


User provided reference genes

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