Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.2e-107 393.3 209 100.0
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 1.3e-34 150.6 179 56.4
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 6.2e-32 141.7 188 51.6
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 8.1e-32 141.4 187 49.2
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 1.8e-31 140.2 193 48.7
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 6.9e-31 138.3 179 50.3
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 9.0e-31 137.9 186 50.5
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 2.0e-30 136.7 177 50.8
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 2.6e-30 136.3 199 48.7
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 4.5e-30 135.6 183 49.2
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 1.7e-29 133.7 178 52.8
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 2.2e-29 133.3 177 50.3
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.9e-28 130.2 188 48.4
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 2.4e-28 129.8 186 48.9
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 7.1e-28 128.3 183 50.8
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 7.1e-28 128.3 204 45.6
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.6e-27 127.1 185 47.6
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 2.1e-27 126.7 182 48.9
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 2.7e-27 126.3 177 49.7
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 4.6e-27 125.6 177 49.2
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 4.6e-27 125.6 180 51.1
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 6.0e-27 125.2 179 49.2
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 7.9e-27 124.8 178 51.7
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 7.9e-27 124.8 177 49.2
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.0e-26 124.4 199 47.2
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 1.3e-26 124.0 199 45.7
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.3e-26 123.2 185 44.9
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 3.9e-26 122.5 180 47.8
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 6.7e-26 121.7 178 47.8
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 6.7e-26 121.7 177 48.0
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 6.7e-26 121.7 180 46.1
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 6.7e-26 121.7 178 46.6
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 8.7e-26 121.3 186 46.8
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 1.1e-25 120.9 194 47.9
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 1.5e-25 120.6 184 50.0
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 1.9e-25 120.2 179 48.0
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.9e-25 120.2 168 51.2
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.9e-25 120.2 177 48.6
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 2.5e-25 119.8 178 47.8
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 2.5e-25 119.8 177 48.6
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 5.6e-25 118.6 177 45.2
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 5.6e-25 118.6 176 48.3
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 7.4e-25 118.2 179 45.8
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 7.4e-25 118.2 201 45.3
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 9.6e-25 117.9 180 46.7
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 1.3e-24 117.5 180 46.1
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 1.6e-24 117.1 178 49.4
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.6e-24 117.1 171 49.1
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.1e-24 116.7 178 46.1
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 2.1e-24 116.7 182 45.1
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 2.8e-24 116.3 170 46.5
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 2.8e-24 116.3 177 44.1
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.8e-24 116.3 177 44.1
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 3.7e-24 115.9 200 44.5
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 3.7e-24 115.9 181 44.2
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 4.8e-24 115.5 177 46.3
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 1.1e-23 114.4 179 43.6
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 2.4e-23 113.2 199 43.2
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 2.4e-23 113.2 199 43.2
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 3.1e-23 112.8 185 46.5
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 2.0e-22 110.2 182 46.2
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 2.0e-22 110.2 185 44.9
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 5.8e-22 108.6 158 48.1
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 5.8e-22 108.6 179 47.5
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 1.3e-21 107.5 176 46.0
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 2.2e-21 106.7 177 44.1
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 2.9e-21 106.3 162 45.7
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 2.5e-20 103.2 199 40.2
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 1.2e-19 100.9 178 45.5
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.6e-19 100.5 177 45.2
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.8e-18 97.1 176 42.0
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 5.1e-18 95.5 174 44.3
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 2.5e-17 93.2 193 41.5
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 3.3e-17 92.8 178 42.1
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 5.7e-17 92.0 177 41.8
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.6e-16 90.5 187 41.2
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 1.1e-15 87.8 178 43.3
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 4.5e-14 82.4 207 41.5
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 2.9e-13 79.7 177 40.1
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 1.2e-11 74.3 148 37.8
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 4.8e-08 62.4 185 30.8
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.1e-07 61.2 101 43.6
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 1.5e-06 57.4 106 39.6
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 7.7e-06 55.1 35 74.3
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 7.7e-06 55.1 35 74.3
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 7.7e-06 55.1 180 35.6


User provided reference genes

Program Settings