Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03389 Sequoiadendron giganteum HOM05D001837 ORTHO05D003156 2.8e-143 511.9 259 100.0
SEGI_30965 Sequoiadendron giganteum HOM05D001837 ORTHO05D003156 8.6e-100 367.5 197 93.9
SEGI_40155 Sequoiadendron giganteum HOM05D001837 ORTHO05D003156 9.9e-96 354.0 217 83.4
TAR622G0453 Trochodendron aralioides HOM05D001837 ORTHO05D003156 8.5e-23 111.7 210 36.7
Prupe.1G276600 Prunus persica HOM05D001837 ORTHO05D003156 2.5e-22 110.2 225 35.6
TAR374G0034 Trochodendron aralioides HOM05D001837 ORTHO05D003156 8.0e-21 105.1 209 36.4
QL03p068624 Quercus lobata HOM05D001837 ORTHO05D003156 1.8e-20 104.0 212 34.9
Haze_11995 Corylus avellana HOM05D001837 ORTHO05D003156 3.0e-20 103.2 220 34.5
CiPaw.06G086700 Carya illinoinensis HOM05D001837 ORTHO05D003156 4.0e-20 102.8 224 32.6
MD13G1070300 Malus domestica HOM05D001837 ORTHO05D003156 8.8e-20 101.7 225 33.8
QL05p030086 Quercus lobata HOM05D001837 ORTHO05D003156 4.4e-19 99.4 213 34.7
CANSAT64G2867 Cannabis sativa HOM05D001837 ORTHO05D003156 1.7e-18 97.4 211 34.1
Manes.05G103601 Manihot esculenta HOM05D001837 ORTHO05D003156 2.2e-18 97.1 222 33.8
RcHm_v2.0_Chr4g0439551 Rosa chinensis HOM05D001837 ORTHO05D003156 2.2e-18 97.1 220 32.3
Atru.chr11.1764 Acer truncatum HOM05D001837 ORTHO05D003156 3.7e-18 96.3 215 33.5
Aqoxy3G03432 Aquilegia oxysepala HOM05D001837 ORTHO05D003156 3.7e-18 96.3 224 31.7
FvH4_4g31160 Fragaria vesca HOM05D001837 ORTHO05D003156 3.7e-18 96.3 220 31.8
Nn4g23208 Nelumbo nucifera HOM05D001837 ORTHO05D003156 3.7e-18 96.3 208 36.1
Nn4g23210 Nelumbo nucifera HOM05D001837 ORTHO05D003156 3.7e-18 96.3 208 36.1
GSVIVG01007989001 Vitis vinifera HOM05D001837 ORTHO05D003156 3.7e-18 96.3 223 32.3
Ciclev10031963m.g Citrus clementina HOM05D001837 ORTHO05D003156 8.3e-18 95.1 228 32.9
Duzib068G1234 Durio zibethinus HOM05D001837 ORTHO05D003156 1.4e-17 94.4 207 30.0
FAN07G1123 Fragaria x ananassa HOM05D001837 ORTHO05D003156 1.4e-17 94.4 220 31.8
MD16G1070700 Malus domestica HOM05D001837 ORTHO05D003156 1.4e-17 94.4 225 32.9
Thecc.03G090700 Theobroma cacao HOM05D001837 ORTHO05D003156 1.4e-17 94.4 231 29.4
TWI75G0812 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 3.1e-17 93.2 223 33.2
Duzib205G1152 Durio zibethinus HOM05D001837 ORTHO05D003156 4.1e-17 92.8 208 29.3
Potri.008G088200 Populus trichocarpa HOM05D001837 ORTHO05D003156 4.1e-17 92.8 231 32.0
Cpa.g.sc1.45 Carica papaya HOM05D001837 ORTHO05D003156 7.0e-17 92.0 215 32.6
DCAR_016567 Daucus carota HOM05D001837 ORTHO05D003156 9.1e-17 91.7 223 29.6
FAN17G3096 Fragaria x ananassa HOM05D001837 ORTHO05D003156 9.1e-17 91.7 220 31.4
MBI05_g10771_MAGBIO Magnolia biondii HOM05D001837 ORTHO05D003156 4.5e-16 89.4 200 31.0
Gorai.008G194100 Gossypium raimondii HOM05D001837 ORTHO05D003156 2.9e-15 86.7 207 29.5
PGR083G0186 Punica granatum HOM05D001837 ORTHO05D003156 2.9e-15 86.7 215 28.8
TWI31G0386 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 1.1e-14 84.7 221 33.0
Sabra10G0127100 Salix brachista HOM05D001837 ORTHO05D003156 1.5e-14 84.3 232 30.6
CiPaw.05G133000 Carya illinoinensis HOM05D001837 ORTHO05D003156 1.9e-14 84.0 222 32.9
VMungo0251G2482 Vigna mungo HOM05D001837 ORTHO05D003156 2.5e-14 83.6 223 29.1
Sabra08G0065900 Salix brachista HOM05D001837 ORTHO05D003156 5.5e-14 82.4 231 32.5
Manes.01G034600 Manihot esculenta HOM05D001837 ORTHO05D003156 9.5e-14 81.6 230 31.3
Potri.010G167300 Populus trichocarpa HOM05D001837 ORTHO05D003156 1.2e-13 81.3 223 30.9
Nn3g17279 Nelumbo nucifera HOM05D001837 ORTHO05D003156 1.6e-13 80.9 209 32.5
MELO3C012107.2 Cucumis melo HOM05D001837 ORTHO05D003156 2.1e-13 80.5 254 28.0
FAN22G1026 Fragaria x ananassa HOM05D001837 ORTHO05D003156 2.1e-13 80.5 236 29.2
Gohir.A12G178400 Gossypium hirsutum HOM05D001837 ORTHO05D003156 3.6e-13 79.7 173 28.9
CSS0026210 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 6.1e-13 79.0 214 31.8
AUR62021664 Chenopodium quinoa HOM05D001837 ORTHO05D003156 6.1e-13 79.0 223 29.1
Glyma.07G228900 Glycine max HOM05D001837 ORTHO05D003156 6.1e-13 79.0 224 27.2
ATR0564G025 Amborella trichopoda HOM05D001837 ORTHO05D003156 8.0e-13 78.6 117 37.6
Sc12g0006430 Simmondsia chinensis HOM05D001837 ORTHO05D003156 8.0e-13 78.6 206 28.6
CSS0045077 Camellia sinensis var. sinensis HOM05D001837 ORTHO05D003156 1.0e-12 78.2 208 32.2
COL.COLO4_22947 Corchorus olitorius HOM05D001837 ORTHO05D003156 1.4e-12 77.8 206 31.1
Dinv16662 Davidia involucrata HOM05D001837 ORTHO05D003156 1.4e-12 77.8 210 29.5
CsaV3_5G032860 Cucumis sativus L. HOM05D001837 ORTHO05D003156 1.8e-12 77.4 216 28.2
Eucgr.B00522 Eucalyptus grandis HOM05D001837 ORTHO05D003156 1.8e-12 77.4 213 28.6
Lalb_Chr10g0098411 Lupinus albus HOM05D001837 ORTHO05D003156 4.0e-12 76.3 220 28.6
PSO013G0078 Papaver somniferum HOM05D001837 ORTHO05D003156 8.9e-12 75.1 213 29.6
PSO832G0505 Papaver somniferum HOM05D001837 ORTHO05D003156 8.9e-12 75.1 227 27.8
Rhsim12G0155800 Rhododendron simsii HOM05D001837 ORTHO05D003156 1.2e-11 74.7 210 31.0
arahy.Tifrunner.gnm1.ann1.GD5YP7 Arachis hypogaea HOM05D001837 ORTHO05D003156 2.0e-11 73.9 235 29.4
arahy.Tifrunner.gnm1.ann1.PIZ1S4 Arachis hypogaea HOM05D001837 ORTHO05D003156 2.0e-11 73.9 235 29.4
Ciclev10020575m.g Citrus clementina HOM05D001837 ORTHO05D003156 2.6e-11 73.6 241 27.8
Gohir.D12G180800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 5.7e-11 72.4 173 27.2
Actinidia04882 Actinidia chinensis HOM05D001837 ORTHO05D003156 7.5e-11 72.0 244 30.7
Ca_18825_v3 Cicer arietinum L. HOM05D001837 ORTHO05D003156 9.8e-11 71.6 214 26.6
Duzib248G0439 Durio zibethinus HOM05D001837 ORTHO05D003156 9.8e-11 71.6 215 28.8
Gohir.A07G065800 Gossypium hirsutum HOM05D001837 ORTHO05D003156 9.8e-11 71.6 214 26.6
Gohir.D07G070300 Gossypium hirsutum HOM05D001837 ORTHO05D003156 1.7e-10 70.9 214 26.6
Gorai.001G074200 Gossypium raimondii HOM05D001837 ORTHO05D003156 1.7e-10 70.9 214 26.6
AUR62008429 Chenopodium quinoa HOM05D001837 ORTHO05D003156 2.8e-10 70.1 236 28.0
ClCG04G012180 Citrullus lanatus HOM05D001837 ORTHO05D003156 3.7e-10 69.7 207 30.9
ClCG05G024160 Citrullus lanatus HOM05D001837 ORTHO05D003156 4.9e-10 69.3 188 29.3
Duzib268G0595 Durio zibethinus HOM05D001837 ORTHO05D003156 6.3e-10 68.9 218 30.3
FAN12G3985 Fragaria x ananassa HOM05D001837 ORTHO05D003156 6.3e-10 68.9 203 31.0
Lalb_Chr17g0340811 Lupinus albus HOM05D001837 ORTHO05D003156 6.3e-10 68.9 221 29.4
Dinv38727 Davidia involucrata HOM05D001837 ORTHO05D003156 8.3e-10 68.6 174 31.6
MELO3C001991.2 Cucumis melo HOM05D001837 ORTHO05D003156 5.4e-09 65.9 234 29.1
THA.LOC104813882 Tarenaya hassleriana HOM05D001837 ORTHO05D003156 1.2e-08 64.7 228 25.9
Lj4g0016263 Lotus japonicus HOM05D001837 ORTHO05D003156 2.0e-08 63.9 220 26.8
EL10Ac5g11033 Beta vulgaris HOM05D001837 ORTHO05D003156 2.7e-08 63.5 200 29.0
CsaV3_1G005580 Cucumis sativus L. HOM05D001837 ORTHO05D003156 2.7e-08 63.5 205 28.8
QL10p017299 Quercus lobata HOM05D001837 ORTHO05D003156 2.7e-08 63.5 180 31.7
Manes.06G091500 Manihot esculenta HOM05D001837 ORTHO05D003156 3.5e-08 63.2 216 25.9
Gohir.A13G076400 Gossypium hirsutum HOM05D001837 ORTHO05D003156 4.5e-08 62.8 214 27.6
Manes.14G079700 Manihot esculenta HOM05D001837 ORTHO05D003156 5.9e-08 62.4 214 25.7
Hund02639 Selenicereus undatus HOM05D001837 ORTHO05D003156 7.8e-08 62.0 224 26.8
Actinidia37619 Actinidia chinensis HOM05D001837 ORTHO05D003156 1.0e-07 61.6 223 27.8
Gohir.D13G076000 Gossypium hirsutum HOM05D001837 ORTHO05D003156 1.0e-07 61.6 214 27.6
Gorai.013G086600 Gossypium raimondii HOM05D001837 ORTHO05D003156 1.0e-07 61.6 214 27.6
TPR.G9249 Trifolium pratense HOM05D001837 ORTHO05D003156 1.0e-07 61.6 235 28.5
FvH4_5g14780 Fragaria vesca HOM05D001837 ORTHO05D003156 1.3e-07 61.2 241 26.1
Lsat_1_v5_gn_9_27060 Lactuca sativa HOM05D001837 ORTHO05D003156 1.3e-07 61.2 127 29.1
Psat4g050040 Pisum sativum HOM05D001837 ORTHO05D003156 1.3e-07 61.2 234 29.5
arahy.Tifrunner.gnm1.ann1.K1S2P8 Arachis hypogaea HOM05D001837 ORTHO05D003156 1.7e-07 60.8 120 31.7
MD06G1194900 Malus domestica HOM05D001837 ORTHO05D003156 1.7e-07 60.8 234 23.5
arahy.Tifrunner.gnm1.ann1.U9RCFT Arachis hypogaea HOM05D001837 ORTHO05D003156 2.3e-07 60.5 120 31.7
Medtr4g108720 Medicago truncatula HOM05D001837 ORTHO05D003156 2.3e-07 60.5 120 30.8
HanXRQChr05g0156101 Helianthus annuus HOM05D001837 ORTHO05D003156 3.9e-07 59.7 230 26.1
Lalb_Chr07g0178101 Lupinus albus HOM05D001837 ORTHO05D003156 6.6e-07 58.9 115 31.3
Lj4g0007316 Lotus japonicus HOM05D001837 ORTHO05D003156 8.6e-07 58.5 120 30.8
Dinv34139 Davidia involucrata HOM05D001837 ORTHO05D003156 1.1e-06 58.2 188 25.5
Aa31LG7G3540 Aethionema arabicum HOM05D001837 ORTHO05D003156 1.5e-06 57.8 237 24.5
Glyma.17G101300 Glycine max HOM05D001837 ORTHO05D003156 1.9e-06 57.4 229 26.6
Phvul.002G172350 Phaseolus vulgaris HOM05D001837 ORTHO05D003156 2.5e-06 57.0 174 25.3
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.3e-06 56.6 229 26.2
Duzib251G0307 Durio zibethinus HOM05D001837 ORTHO05D003156 7.3e-06 55.5 130 33.1
Phvul.003G189100 Phaseolus vulgaris HOM05D001837 ORTHO05D003156 7.3e-06 55.5 181 28.7


User provided reference genes

Program Settings