Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03367 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 2.1e-202 708.8 347 100.0
SEGI_14316 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 6.4e-66 255.4 133 94.7
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 5.4e-49 199.1 282 44.7
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 7.4e-30 135.6 164 48.8
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 6.9e-28 129.0 144 47.2
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 6.9e-28 129.0 145 48.3
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 1.2e-27 128.3 168 44.0
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 7.7e-27 125.6 149 45.0
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 7.7e-27 125.6 145 46.9
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 1.3e-26 124.8 145 49.7
Solyc11g062310.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 2.9e-26 123.6 168 42.9
Thecc.09G254300 Theobroma cacao HOM05D004500 ORTHO05D005775 2.9e-26 123.6 145 46.2
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 3.8e-26 123.2 151 45.7
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 3.8e-26 123.2 149 45.0
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 1.1e-25 121.7 151 45.0
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 1.4e-25 121.3 142 47.2
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 1.4e-25 121.3 149 46.3
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 1.9e-25 120.9 149 45.0
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 1.9e-25 120.9 150 46.0
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 2.5e-25 120.6 144 44.4
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 3.2e-25 120.2 151 45.0
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 3.2e-25 120.2 151 45.0
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 7.2e-25 119.0 145 48.3
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 9.4e-25 118.6 168 41.7
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 1.2e-24 118.2 149 46.3
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 1.6e-24 117.9 151 45.7
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 2.1e-24 117.5 145 48.3
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 2.7e-24 117.1 158 43.7
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 2.7e-24 117.1 158 43.7
Peaxi162Scf00029g02524 Petunia axillaris HOM05D004500 ORTHO05D005775 2.7e-24 117.1 169 42.0
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 3.6e-24 116.7 146 47.3
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 3.6e-24 116.7 146 47.3
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 3.6e-24 116.7 149 46.3
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 3.6e-24 116.7 145 45.5
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 3.6e-24 116.7 145 45.5
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 3.6e-24 116.7 168 41.7
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 3.6e-24 116.7 164 41.5
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 6.1e-24 115.9 168 42.3
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 7.9e-24 115.5 142 45.8
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 7.9e-24 115.5 168 42.9
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 1.4e-23 114.8 149 45.0
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 1.4e-23 114.8 133 47.4
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 1.4e-23 114.8 149 43.0
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 2.3e-23 114.0 164 40.9
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 3.0e-23 113.6 149 43.6
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 3.9e-23 113.2 151 44.4
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 5.1e-23 112.8 134 46.3
Lj1C1068G11 Lonicera japonica HOM05D004500 ORTHO05D005775 6.7e-23 112.5 130 49.2
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 8.8e-23 112.1 164 40.2
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 1.1e-22 111.7 151 41.7
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 1.1e-22 111.7 149 40.3
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 2.0e-22 110.9 149 44.3
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 2.5e-22 110.5 152 40.8
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 5.7e-22 109.4 149 41.6
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 5.7e-22 109.4 149 43.6
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 5.7e-22 109.4 167 41.9
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 7.4e-22 109.0 149 44.3
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 7.4e-22 109.0 147 42.2
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 7.4e-22 109.0 152 42.8
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 9.7e-22 108.6 128 46.1
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 1.3e-21 108.2 168 40.5
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 2.2e-21 107.5 147 40.8
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 2.2e-21 107.5 147 40.8
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 2.2e-21 107.5 147 40.8
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 2.8e-21 107.1 151 39.7
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 3.7e-21 106.7 142 45.1
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 6.3e-21 105.9 147 40.1
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 6.3e-21 105.9 147 40.8
DCAR_023834 Daucus carota HOM05D004500 ORTHO05D005775 6.3e-21 105.9 146 42.5
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 8.2e-21 105.5 163 40.5
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 1.1e-20 105.1 150 42.0
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 1.4e-20 104.8 162 38.3
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 1.4e-20 104.8 147 40.1
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 1.4e-20 104.8 147 40.1
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 1.8e-20 104.4 150 39.3
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 1.8e-20 104.4 145 44.8
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 2.4e-20 104.0 169 39.6
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 3.1e-20 103.6 138 42.0
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 3.1e-20 103.6 149 41.6
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 3.1e-20 103.6 129 45.0
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 4.1e-20 103.2 144 39.6
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 9.1e-20 102.1 139 41.0
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 1.2e-19 101.7 147 39.5
CDE02G2423 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 1.5e-19 101.3 129 41.1
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 1.5e-19 101.3 139 41.7
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.5e-19 101.3 133 44.4
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 2.0e-19 100.9 133 43.6
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 3.4e-19 100.1 153 41.2
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 1.3e-18 98.2 133 40.6
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.2e-18 97.4 137 41.6
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.9e-18 97.1 137 42.3
COL.COLO4_06617 Corchorus olitorius HOM05D004500 ORTHO05D005775 3.8e-18 96.7 111 43.2
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 1.4e-17 94.7 152 38.8
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 5.5e-17 92.8 155 35.5
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 5.5e-17 92.8 155 36.8
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 5.5e-17 92.8 157 37.6
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 2.6e-14 84.0 152 36.2
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 3.5e-11 73.6 115 38.3
SEGI_02143 Sequoiadendron giganteum HOM05D000252 ORTHO05D006173 4.5e-11 73.2 75 46.7
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 1.3e-10 71.6 149 31.5
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 5.5e-09 66.2 140 32.1
SEGI_40801 Sequoiadendron giganteum HOM05D003314 ORTHO05D000285 1.4e-07 61.6 54 53.7
SEGI_41300 Sequoiadendron giganteum HOM05D003314 ORTHO05D015881 1.4e-07 61.6 54 53.7
SEGI_24665 Sequoiadendron giganteum HOM05D013703 ORTHO05D000002 5.2e-07 59.7 64 48.4
SEGI_19377 Sequoiadendron giganteum HOM05D013703 ORTHO05D000002 2.0e-06 57.8 57 49.1
SEGI_12849 Sequoiadendron giganteum HOM05D003461 ORTHO05D004386 2.6e-06 57.4 102 37.3
SEGI_12999 Sequoiadendron giganteum HOM05D013703 ORTHO05D000002 7.5e-06 55.8 57 47.4
SEGI_41399 Sequoiadendron giganteum HOM05D001291 ORTHO05D001375 7.5e-06 55.8 41 56.1


User provided reference genes

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