Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.3e-185 652.9 330 100.0
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.2e-93 347.4 165 100.0
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.3e-68 264.2 273 51.6
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 1.8e-65 253.8 296 47.6
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.1e-64 251.1 282 46.8
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 1.5e-64 250.8 296 45.6
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 2.0e-64 250.4 280 47.1
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.0e-64 250.4 280 47.5
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 5.7e-64 248.8 295 44.7
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 7.4e-64 248.4 275 47.6
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 9.7e-64 248.1 304 45.1
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 1.3e-63 247.7 279 47.0
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 1.3e-63 247.7 276 46.4
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 2.2e-63 246.9 310 44.8
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 2.2e-63 246.9 278 47.5
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 3.7e-63 246.1 296 46.3
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 3.7e-63 246.1 294 43.5
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 4.8e-63 245.7 281 46.6
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 6.3e-63 245.4 298 45.3
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 6.3e-63 245.4 279 47.3
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 6.3e-63 245.4 295 45.1
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 6.3e-63 245.4 293 45.7
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 8.2e-63 245.0 295 45.1
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 8.2e-63 245.0 296 45.3
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 1.1e-62 244.6 296 45.6
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 1.1e-62 244.6 296 45.3
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.1e-62 244.6 296 45.3
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.1e-62 244.6 301 44.9
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 1.1e-62 244.6 301 44.9
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 1.4e-62 244.2 297 45.1
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.4e-62 244.2 294 45.2
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.8e-62 243.8 281 48.0
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 1.8e-62 243.8 278 47.1
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 1.8e-62 243.8 279 47.0
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 1.8e-62 243.8 297 46.5
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 2.4e-62 243.4 298 43.3
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 2.4e-62 243.4 296 45.6
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 2.4e-62 243.4 281 47.3
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 2.4e-62 243.4 293 46.4
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 2.4e-62 243.4 298 46.0
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 3.1e-62 243.0 281 46.3
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 3.1e-62 243.0 281 46.3
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 3.1e-62 243.0 298 44.6
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.1e-62 243.0 296 44.9
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 4.1e-62 242.7 279 45.5
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 5.3e-62 242.3 275 47.3
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 7.0e-62 241.9 279 45.2
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 9.1e-62 241.5 292 45.2
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 1.6e-61 240.7 282 46.5
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 2.6e-61 240.0 298 43.6
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 2.6e-61 240.0 282 46.8
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 2.6e-61 240.0 246 50.4
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 2.6e-61 240.0 277 48.4
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 3.5e-61 239.6 291 45.0
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 4.5e-61 239.2 278 47.8
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 5.9e-61 238.8 281 45.6
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 5.9e-61 238.8 279 44.8
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 5.9e-61 238.8 282 45.0
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 7.7e-61 238.4 279 46.2
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 1.0e-60 238.0 278 45.7
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 1.3e-60 237.7 278 45.0
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 1.3e-60 237.7 296 42.9
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 1.7e-60 237.3 300 43.3
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 1.7e-60 237.3 276 46.4
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 1.7e-60 237.3 290 43.1
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 1.7e-60 237.3 276 46.0
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 2.2e-60 236.9 295 44.7
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.2e-60 236.9 222 52.7
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 2.2e-60 236.9 251 48.6
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 2.9e-60 236.5 292 43.8
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 2.9e-60 236.5 282 44.7
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 2.9e-60 236.5 282 44.7
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 2.9e-60 236.5 273 46.2
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 3.8e-60 236.1 278 44.6
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 3.8e-60 236.1 229 50.2
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 5.0e-60 235.7 333 41.4
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 6.5e-60 235.3 281 44.5
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 8.5e-60 235.0 296 44.6
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.1e-59 234.6 279 44.1
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 1.5e-59 234.2 222 51.4
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 1.5e-59 234.2 303 44.6
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 1.9e-59 233.8 299 44.8
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 2.5e-59 233.4 281 45.6
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 3.2e-59 233.0 293 43.7
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 4.2e-59 232.6 277 43.3
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 5.5e-59 232.3 272 47.1
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 7.2e-59 231.9 295 43.4
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 7.2e-59 231.9 296 43.2
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 1.2e-58 231.1 274 44.2
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 1.6e-58 230.7 282 45.0
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 1.6e-58 230.7 282 45.0
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 1.6e-58 230.7 291 44.0
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 1.6e-58 230.7 275 45.8
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 3.6e-58 229.6 286 44.8
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 4.7e-58 229.2 297 43.1
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 6.1e-58 228.8 275 46.5
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 6.1e-58 228.8 302 42.1
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 1.0e-57 228.0 298 42.3
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 1.4e-57 227.6 292 41.1
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 1.4e-57 227.6 293 43.0
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 1.8e-57 227.3 283 44.9
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 2.3e-57 226.9 289 44.3
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 2.3e-57 226.9 274 45.3
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 3.0e-57 226.5 298 41.6
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 3.0e-57 226.5 274 45.3
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 5.2e-57 225.7 298 43.3
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 5.2e-57 225.7 292 43.2
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 6.8e-57 225.3 289 41.9
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.2e-56 224.6 304 41.4
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 1.5e-56 224.2 299 41.1
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 1.5e-56 224.2 299 41.1
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 2.6e-56 223.4 253 47.0
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 3.4e-56 223.0 304 41.4
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 3.4e-56 223.0 299 41.1
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 3.4e-56 223.0 179 55.3
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 5.7e-56 222.2 272 44.1
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 7.5e-56 221.9 274 43.1
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 7.5e-56 221.9 305 44.6
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 1.3e-55 221.1 305 44.3
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 2.2e-55 220.3 276 44.6
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 2.8e-55 219.9 297 42.8
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 4.8e-55 219.2 285 41.4
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 8.3e-55 218.4 276 44.6
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 8.3e-55 218.4 298 42.3
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 1.4e-54 217.6 276 44.9
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 1.8e-54 217.2 291 42.6
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 2.4e-54 216.9 276 42.8
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 2.4e-54 216.9 298 41.9
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 3.1e-54 216.5 282 42.2
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 5.4e-54 215.7 255 44.7
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 7.7e-53 211.8 287 40.4
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 1.0e-52 211.5 291 41.9
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.9e-51 207.2 152 63.2
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 3.2e-51 206.5 287 42.9
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 4.2e-51 206.1 221 47.1
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 5.7e-48 195.7 158 58.2
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 2.7e-45 186.8 145 58.6
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.8e-44 183.0 121 64.5
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 5.0e-44 182.6 251 40.2
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.3e-43 179.9 116 65.5
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 5.7e-40 169.1 250 38.8
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 2.8e-26 123.6 83 62.7
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 3.6e-26 123.2 118 51.7
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.2e-24 118.2 193 36.3
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 1.6e-21 107.8 158 39.9
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 4.6e-21 106.3 133 41.4
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 6.0e-21 105.9 120 42.5
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 7.8e-21 105.5 85 65.9
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 2.3e-20 104.0 204 33.8
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 5.1e-20 102.8 125 44.0
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 8.6e-20 102.1 210 31.0
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 6.2e-18 95.9 129 38.0
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.7e-15 87.8 135 37.0
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 4.9e-15 86.3 106 41.5
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 8.4e-15 85.5 135 36.3
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.9e-14 84.3 63 54.0
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 3.2e-14 83.6 85 54.1
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 3.2e-14 83.6 48 72.9
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 2.7e-13 80.5 130 30.0
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 1.3e-12 78.2 49 75.5
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 3.3e-11 73.6 76 48.7
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 4.0e-09 66.6 169 30.2
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 1.5e-08 64.7 163 31.3
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.7e-07 61.2 164 29.9


User provided reference genes

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