Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03319 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 9.0e-50 199.9 98 100.0
Nn4g23396 Nelumbo nucifera HOM05D004724 ORTHO05D005734 6.7e-29 130.6 95 63.2
ATR0064G103 Amborella trichopoda HOM05D004724 ORTHO05D005734 1.1e-28 129.8 95 61.1
Lalb_Chr10g0098781 Lupinus albus HOM05D004724 ORTHO05D005734 2.6e-28 128.6 93 64.5
MBI16_g13587_MAGBIO Magnolia biondii HOM05D004724 ORTHO05D005734 5.7e-28 127.5 96 60.4
Os07g0599000 Oryza sativa ssp. japonica HOM05D004724 ORTHO05D005734 5.7e-28 127.5 96 60.4
COL.COLO4_27896 Corchorus olitorius HOM05D004724 ORTHO05D005734 7.4e-28 127.1 96 62.5
Nn3g17424 Nelumbo nucifera HOM05D004724 ORTHO05D005734 7.4e-28 127.1 96 62.5
Glyma.02G116000 Glycine max HOM05D004724 ORTHO05D005734 9.7e-28 126.7 94 62.8
Thecc.02G332500 Theobroma cacao HOM05D004724 ORTHO05D005734 1.7e-27 125.9 96 60.4
TAR374G1337 Trochodendron aralioides HOM05D004724 ORTHO05D005734 1.7e-27 125.9 96 60.4
TPR.G24471 Trifolium pratense HOM05D004724 ORTHO05D005734 2.2e-27 125.6 95 60.0
CDE04G2698 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 2.8e-27 125.2 94 59.6
CiPaw.05G125900 Carya illinoinensis HOM05D004724 ORTHO05D005734 3.7e-27 124.8 96 60.4
Ca_04959_v3 Cicer arietinum L. HOM05D004724 ORTHO05D005734 3.7e-27 124.8 95 62.1
Cc11_g12080 Coffea canephora HOM05D004724 ORTHO05D005734 1.4e-26 122.9 94 60.6
Gohir.D02G129300 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.4e-26 122.9 96 58.3
Gorai.005G145100 Gossypium raimondii HOM05D004724 ORTHO05D005734 1.4e-26 122.9 96 58.3
TAR622G0524 Trochodendron aralioides HOM05D004724 ORTHO05D005734 2.4e-26 122.1 96 58.3
Gohir.A03G104200 Gossypium hirsutum HOM05D004724 ORTHO05D005734 3.1e-26 121.7 96 57.3
Atru.chr11.1649 Acer truncatum HOM05D004724 ORTHO05D005734 5.3e-26 120.9 96 55.2
Glyma.01G058200 Glycine max HOM05D004724 ORTHO05D005734 5.3e-26 120.9 93 61.3
Medtr5g044270 Medicago truncatula HOM05D004724 ORTHO05D005734 5.3e-26 120.9 91 60.4
GSVIVG01012211001 Vitis vinifera HOM05D004724 ORTHO05D005734 5.3e-26 120.9 96 56.2
Zm00001eb108470 Zea mays HOM05D004724 ORTHO05D005734 5.3e-26 120.9 91 58.2
AL1G39280 Arabidopsis lyrata HOM05D004724 ORTHO05D005734 7.0e-26 120.6 93 59.1
AT1G26460 Arabidopsis thaliana HOM05D004724 ORTHO05D005734 7.0e-26 120.6 93 59.1
QL03p072513 Quercus lobata HOM05D004724 ORTHO05D005734 9.1e-26 120.2 96 56.2
Carub.0001s2456 Capsella rubella HOM05D004724 ORTHO05D005734 1.2e-25 119.8 93 59.1
Cfa008886 Carpinus fangiana HOM05D004724 ORTHO05D005734 1.2e-25 119.8 96 57.3
THA.LOC104822013 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 1.2e-25 119.8 96 56.2
CARHR025500 Cardamine hirsuta HOM05D004724 ORTHO05D005734 1.5e-25 119.4 93 57.0
Prupe.1G286100 Prunus persica HOM05D004724 ORTHO05D005734 1.5e-25 119.4 96 56.2
TWI79G1393 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 1.5e-25 119.4 96 54.2
Thhalv10007071m.g Eutrema salsugineum HOM05D004724 ORTHO05D005734 2.0e-25 119.0 93 58.1
Zm00001eb326730 Zea mays HOM05D004724 ORTHO05D005734 2.6e-25 118.6 91 57.1
QL03p072107 Quercus lobata HOM05D004724 ORTHO05D005734 3.5e-25 118.2 96 56.2
Lj2g0005374 Lotus japonicus HOM05D004724 ORTHO05D005734 4.5e-25 117.9 96 55.2
ClCG08G010390 Citrullus lanatus HOM05D004724 ORTHO05D005734 7.7e-25 117.1 96 55.2
RcHm_v2.0_Chr4g0438491 Rosa chinensis HOM05D004724 ORTHO05D005734 7.7e-25 117.1 96 55.2
PGR102G0250 Punica granatum HOM05D004724 ORTHO05D005734 1.3e-24 116.3 96 56.2
BraA09t39487Z Brassica rapa HOM05D004724 ORTHO05D005734 1.7e-24 115.9 89 58.4
BolC5t31188H Brassica oleracea HOM05D004724 ORTHO05D005734 2.2e-24 115.5 89 58.4
Cpa.g.sc1.117 Carica papaya HOM05D004724 ORTHO05D005734 2.2e-24 115.5 96 54.2
Sc04g0007630 Simmondsia chinensis HOM05D004724 ORTHO05D005734 2.2e-24 115.5 96 55.2
Ciclev10031249m.g Citrus clementina HOM05D004724 ORTHO05D005734 2.9e-24 115.2 96 53.1
Eucgr.B03160 Eucalyptus grandis HOM05D004724 ORTHO05D005734 2.9e-24 115.2 96 54.2
HanXRQChr08g0211831 Helianthus annuus HOM05D004724 ORTHO05D005734 3.8e-24 114.8 96 53.1
TWI31G1115 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 5.0e-24 114.4 96 54.2
HPP92_009526 Vanilla planifolia HOM05D004724 ORTHO05D005734 5.0e-24 114.4 96 54.2
A09p39880 Brassica napus HOM05D004724 ORTHO05D005734 6.5e-24 114.0 89 57.3
C05p24540 Brassica napus HOM05D004724 ORTHO05D005734 6.5e-24 114.0 89 57.3
CAN.G616.33 Capsicum annuum HOM05D004724 ORTHO05D005734 8.5e-24 113.6 93 57.0
Peaxi162Scf00175g00020 Petunia axillaris HOM05D004724 ORTHO05D005734 8.5e-24 113.6 93 57.0
CANSAT64G0483 Cannabis sativa HOM05D004724 ORTHO05D005734 1.1e-23 113.2 96 53.1
Nitab4.5_0000231g0420 Nicotiana tabacum HOM05D004724 ORTHO05D005734 1.1e-23 113.2 93 57.0
Nitab4.5_0004171g0040 Nicotiana tabacum HOM05D004724 ORTHO05D005734 1.1e-23 113.2 93 57.0
Sed0014019 Sechium edule HOM05D004724 ORTHO05D005734 1.1e-23 113.2 96 52.1
HPP92_009555 Vanilla planifolia HOM05D004724 ORTHO05D005734 1.1e-23 113.2 96 54.2
Aa31LG7G8630 Aethionema arabicum HOM05D004724 ORTHO05D005734 1.5e-23 112.8 93 54.8
Ah.02g126910 Amaranthus hybridus HOM05D004724 ORTHO05D005734 1.5e-23 112.8 96 54.2
EL10Ac6g14982 Beta vulgaris HOM05D004724 ORTHO05D005734 1.9e-23 112.5 96 56.2
Sopen05g007210 Solanum pennellii HOM05D004724 ORTHO05D005734 1.9e-23 112.5 93 58.1
PGSC0003DMG400028320 Solanum tuberosum HOM05D004724 ORTHO05D005734 1.9e-23 112.5 93 58.1
MD13G1063400 Malus domestica HOM05D004724 ORTHO05D005734 2.5e-23 112.1 96 53.1
AUR62003111 Chenopodium quinoa HOM05D004724 ORTHO05D005734 3.2e-23 111.7 96 56.2
Solyc05g012390.4 Solanum lycopersicum HOM05D004724 ORTHO05D005734 3.2e-23 111.7 93 57.0
MD16G1061800 Malus domestica HOM05D004724 ORTHO05D005734 5.5e-23 110.9 96 53.1
CsaV3_6G033660 Cucumis sativus L. HOM05D004724 ORTHO05D005734 7.2e-23 110.5 96 51.0
THA.LOC104805036 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 9.4e-23 110.2 96 54.2
MSTRG.13448 Avicennia marina HOM05D004724 ORTHO05D005734 1.2e-22 109.8 93 53.8
CiPaw.06G092100 Carya illinoinensis HOM05D004724 ORTHO05D005734 1.2e-22 109.8 93 54.8
AUR62007926 Chenopodium quinoa HOM05D004724 ORTHO05D005734 1.2e-22 109.8 96 54.2
Lsat_1_v5_gn_8_47681 Lactuca sativa HOM05D004724 ORTHO05D005734 1.6e-22 109.4 95 52.6
SGA_v2.0_scaffold16G07777 Striga asiatica HOM05D004724 ORTHO05D005734 1.6e-22 109.4 93 55.9
MELO3C011422.2 Cucumis melo HOM05D004724 ORTHO05D005734 2.1e-22 109.0 96 51.0
ECA233G5398 Erigeron canadensis HOM05D004724 ORTHO05D005734 2.1e-22 109.0 96 52.1
FAN22G1297 Fragaria x ananassa HOM05D004724 ORTHO05D005734 2.1e-22 109.0 94 54.3
Hma1.2p1_0354F.1_g133420 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 2.7e-22 108.6 96 49.0
FAN12G2645 Fragaria x ananassa HOM05D004724 ORTHO05D005734 3.6e-22 108.2 94 54.3
Lj6A780T47 Lonicera japonica HOM05D004724 ORTHO05D005734 3.6e-22 108.2 94 52.1
Migut.E00049 Erythranthe guttata HOM05D004724 ORTHO05D005734 4.7e-22 107.8 93 52.7
FvH4_4g30160 Fragaria vesca HOM05D004724 ORTHO05D005734 8.0e-22 107.1 94 53.2
SalBow8G1172 Salvia bowleyana HOM05D004724 ORTHO05D005734 1.0e-21 106.7 88 56.8
vmacro16381 Vaccinium macrocarpon HOM05D004724 ORTHO05D005734 1.4e-21 106.3 96 49.0
PSO017G2003 Papaver somniferum HOM05D004724 ORTHO05D005734 1.8e-21 105.9 94 52.1
PSO478G4140 Papaver somniferum HOM05D004724 ORTHO05D005734 1.8e-21 105.9 94 52.1
DCAR_027465 Daucus carota HOM05D004724 ORTHO05D005734 2.3e-21 105.5 96 46.9
DCAR_027471 Daucus carota HOM05D004724 ORTHO05D005734 2.3e-21 105.5 96 46.9
SalBow2G3108 Salvia bowleyana HOM05D004724 ORTHO05D005734 5.2e-21 104.4 94 54.3
Actinidia28645 Actinidia chinensis HOM05D004724 ORTHO05D005734 1.5e-20 102.8 96 45.8
Manes.01G028400 Manihot esculenta HOM05D004724 ORTHO05D005734 1.5e-20 102.8 96 52.1
C07p19370 Brassica napus HOM05D004724 ORTHO05D005734 4.5e-17 91.3 74 56.8
Hund25184 Selenicereus undatus HOM05D004724 ORTHO05D005734 1.0e-16 90.1 77 51.9
Potri.010G159100 Populus trichocarpa HOM05D004724 ORTHO05D005734 1.3e-16 89.7 96 40.6
SHI32882 Sapria himalayana HOM05D004724 ORTHO05D005734 5.0e-16 87.8 89 49.4
A07p12930 Brassica napus HOM05D004724 ORTHO05D005734 5.5e-15 84.3 68 55.9
BraA07t29066Z Brassica rapa HOM05D004724 ORTHO05D005734 5.5e-15 84.3 68 55.9
CSS0003173 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 5.5e-15 84.3 96 42.7
CDE07G0543 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 1.2e-14 83.2 55 67.3
CSS0040633 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.6e-14 81.6 96 41.7
CSS0037716 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 4.7e-14 81.3 96 40.6
CSS0031560 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 6.1e-14 80.9 96 41.7
Haze_11916 Corylus avellana HOM05D004724 ORTHO05D005734 1.0e-13 80.1 95 41.1
Mapoly0002s0313 Marchantia polymorpha HOM05D004724 ORTHO05D005734 1.0e-13 80.1 80 37.5
CSS0030883 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.4e-13 79.7 94 40.4
FAN07G2095 Fragaria x ananassa HOM05D004724 ORTHO05D005734 3.0e-13 78.6 94 40.4
BolC7t42456H Brassica oleracea HOM05D004724 ORTHO05D005734 4.0e-13 78.2 67 55.2
CSS0025326 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 4.0e-13 78.2 96 39.6
Nitab4.5_0011966g0020 Nicotiana tabacum HOM05D004724 ORTHO05D005734 4.0e-13 78.2 71 52.1
CSS0008548 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 6.8e-13 77.4 68 48.5
FAN17G2607 Fragaria x ananassa HOM05D004724 ORTHO05D005734 2.2e-11 72.4 94 38.3
CSS0020440 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 6.3e-11 70.9 90 38.9
Pp3c1_28760 Physcomitrium patens HOM05D004724 ORTHO05D005734 2.4e-10 68.9 98 33.7
AagrBONN_evm.TU.Sc2ySwM_117.2858 Anthoceros agrestis HOM05D004724 ORTHO05D005734 4.1e-10 68.2 87 35.6
Sabra10G0120800 Salix brachista HOM05D004724 ORTHO05D005734 1.6e-09 66.2 58 48.3
Pp3c14_20030 Physcomitrium patens HOM05D004724 ORTHO05D005734 2.7e-09 65.5 89 33.7
Dinv15029 Davidia involucrata HOM05D004724 ORTHO05D005734 3.5e-09 65.1 50 58.0
Dinv34076 Davidia involucrata HOM05D004724 ORTHO05D005734 3.5e-09 65.1 50 58.0
Oeu048146.1 Olea europaea HOM05D004724 ORTHO05D005734 1.3e-08 63.2 53 54.7
CSS0043256 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.2e-08 62.4 96 35.4
Migut.L01196 Erythranthe guttata HOM05D004724 ORTHO05D005734 1.9e-07 59.3 53 50.9
VMungo1215G0095 Vigna mungo HOM05D004724 ORTHO05D005734 4.2e-07 58.2 50 54.0
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 9.4e-07 57.0 51 45.1
CBR_g55790 Chara braunii HOM05D004724 ORTHO05D005734 9.4e-07 57.0 86 31.4
Aqoxy3G03611 Aquilegia oxysepala HOM05D004724 ORTHO05D005734 2.1e-06 55.8 53 49.1
arahy.Tifrunner.gnm1.ann1.06XI8G Arachis hypogaea HOM05D004724 ORTHO05D005734 2.1e-06 55.8 53 49.1
arahy.Tifrunner.gnm1.ann1.CTA0UQ Arachis hypogaea HOM05D004724 ORTHO05D005734 2.1e-06 55.8 53 49.1
BcaC06g35143 Brassica carinata HOM05D004724 ORTHO05D005734 2.7e-06 55.5 51 51.0
Phvul.003G043100 Phaseolus vulgaris HOM05D004724 ORTHO05D005734 4.7e-06 54.7 53 47.2


User provided reference genes

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