Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.4e-102 375.6 200 100.0
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 3.5e-56 222.2 204 63.2
SEGI_00160 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.2e-51 207.2 212 59.4
SEGI_10087 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.7e-50 203.4 197 64.0
SEGI_14977 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.7e-48 196.1 198 59.1
SEGI_30051 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.3e-42 177.2 182 55.5
SEGI_19253 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 4.5e-40 168.7 182 57.7
SEGI_31432 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 4.5e-40 168.7 182 57.7
SEGI_39312 Sequoiadendron giganteum HOM05D004507 ORTHO05D004874 7.8e-16 88.2 192 35.9
SEGI_26334 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 8.6e-15 84.7 195 32.3
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.9e-14 83.6 172 34.9
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 2.8e-13 79.7 191 31.9
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 8.9e-12 74.7 160 33.8
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 3.4e-11 72.8 151 34.4
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 3.4e-11 72.8 184 32.6
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 5.8e-11 72.0 166 33.7
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 9.9e-11 71.2 198 32.3
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 9.9e-11 71.2 196 31.1
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 1.3e-10 70.9 156 34.0
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 1.3e-10 70.9 190 34.2
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.7e-10 70.5 198 29.8
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 1.7e-10 70.5 186 31.7
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 1.7e-10 70.5 166 35.5
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.7e-10 70.5 189 32.8
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 2.2e-10 70.1 188 32.4
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 2.2e-10 70.1 156 30.8
SEGI_22868 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 2.2e-10 70.1 192 34.9
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 2.9e-10 69.7 193 30.6
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 2.9e-10 69.7 189 30.2
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 3.8e-10 69.3 150 35.3
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 3.8e-10 69.3 149 31.5
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 3.8e-10 69.3 196 34.7
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 4.9e-10 68.9 148 36.5
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 4.9e-10 68.9 191 29.3
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 6.4e-10 68.6 155 34.2
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 6.4e-10 68.6 153 36.6
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 6.4e-10 68.6 153 36.6
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 8.4e-10 68.2 162 32.7
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 8.4e-10 68.2 188 33.0
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 1.1e-09 67.8 191 28.8
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 1.1e-09 67.8 168 34.5
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 1.4e-09 67.4 188 29.8
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 1.4e-09 67.4 156 34.6
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 1.4e-09 67.4 199 31.7
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.4e-09 67.4 155 31.6
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 1.4e-09 67.4 149 34.2
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.9e-09 67.0 148 33.8
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 1.9e-09 67.0 146 37.7
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.9e-09 67.0 154 34.4
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 1.9e-09 67.0 161 36.0
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 3.2e-09 66.2 168 31.0
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 3.2e-09 66.2 183 32.8
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 4.1e-09 65.9 190 30.5
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 5.4e-09 65.5 196 30.1
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 5.4e-09 65.5 160 32.5
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 5.4e-09 65.5 152 34.2
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.2e-09 64.7 179 31.3
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 9.2e-09 64.7 145 34.5
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.2e-08 64.3 186 29.0
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 1.2e-08 64.3 146 33.6
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.6e-08 63.9 185 31.9
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 1.6e-08 63.9 200 30.0
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 2.1e-08 63.5 199 30.2
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.1e-08 63.5 190 30.5
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 2.7e-08 63.2 169 35.5
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 2.7e-08 63.2 174 31.0
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 2.7e-08 63.2 162 33.3
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 3.5e-08 62.8 185 30.8
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 3.5e-08 62.8 195 30.3
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.6e-08 62.4 179 32.4
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.6e-08 62.4 179 33.0
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 4.6e-08 62.4 188 29.3
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 6.0e-08 62.0 163 31.9
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 6.0e-08 62.0 182 33.0
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 6.0e-08 62.0 165 33.3
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 7.8e-08 61.6 153 34.0
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 7.8e-08 61.6 166 30.1
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 1.0e-07 61.2 191 29.3
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 1.0e-07 61.2 193 31.1
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 1.3e-07 60.8 187 29.9
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 1.3e-07 60.8 153 32.7
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.3e-07 60.8 205 28.3
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.3e-07 60.8 152 31.6
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 1.3e-07 60.8 147 31.3
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 1.7e-07 60.5 188 31.4
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 1.7e-07 60.5 153 32.7
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 2.3e-07 60.1 165 33.9
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-07 60.1 182 31.3
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-07 60.1 179 31.3
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-07 60.1 194 31.4
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 2.3e-07 60.1 155 34.8
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 2.3e-07 60.1 188 28.7
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.3e-07 60.1 194 29.4
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 3.0e-07 59.7 170 31.8
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 3.0e-07 59.7 155 33.5
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 3.0e-07 59.7 194 28.9
SEGI_00453 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 3.9e-07 59.3 196 30.6
SEGI_10463 Sequoiadendron giganteum HOM05D058585 ORTHO05D050936 3.9e-07 59.3 210 29.5
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 5.1e-07 58.9 192 30.2
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 5.1e-07 58.9 170 31.2
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 6.6e-07 58.5 195 27.7
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 6.6e-07 58.5 197 27.4
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 6.6e-07 58.5 192 29.2
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 6.6e-07 58.5 167 31.1
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 6.6e-07 58.5 150 30.7
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 8.7e-07 58.2 188 28.7
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.1e-06 57.8 176 29.0
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.1e-06 57.8 192 30.2
Potri.018G090200 Populus trichocarpa HOM05D007765 ORTHO05D009826 1.1e-06 57.8 201 27.4
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 1.1e-06 57.8 190 28.9
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 1.5e-06 57.4 191 30.4
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 1.5e-06 57.4 159 34.0
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 1.5e-06 57.4 176 28.4
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.5e-06 57.4 146 32.2
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 1.9e-06 57.0 151 35.8
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 1.9e-06 57.0 157 33.1
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.9e-06 57.0 198 29.8
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.9e-06 57.0 151 32.5
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 2.5e-06 56.6 176 31.8
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 2.5e-06 56.6 185 29.7
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.5e-06 56.6 189 30.7
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 2.5e-06 56.6 191 29.3
Sabra18G0077700 Salix brachista HOM05D007765 ORTHO05D009826 2.5e-06 56.6 197 25.9
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 2.5e-06 56.6 161 29.8
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 3.3e-06 56.2 185 29.2
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 3.3e-06 56.2 195 29.2
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 3.3e-06 56.2 182 31.3
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 3.3e-06 56.2 189 30.7
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 4.3e-06 55.8 179 30.7
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.3e-06 55.8 200 31.5
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 4.3e-06 55.8 148 30.4
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 4.3e-06 55.8 181 29.3
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 4.3e-06 55.8 149 32.9
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.6e-06 55.5 201 30.8
HPP92_008832 Vanilla planifolia HOM05D001624 ORTHO05D001530 5.6e-06 55.5 185 32.4
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 9.6e-06 54.7 156 30.8
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 9.6e-06 54.7 160 30.6
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 9.6e-06 54.7 176 30.1
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 9.6e-06 54.7 188 28.7


User provided reference genes

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