Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03169 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 0.0e+00 1585.9 821 100.0
SEGI_00809 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 2.2e-40 171.8 761 26.8
ATR0626G214 Amborella trichopoda HOM05D004847 ORTHO05D005856 3.1e-18 98.2 167 43.1
PSO832G1768 Papaver somniferum HOM05D004847 ORTHO05D005856 5.3e-18 97.4 167 42.5
Gohir.D08G227600 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.5e-17 95.9 162 42.0
Gorai.004G241800 Gossypium raimondii HOM05D004847 ORTHO05D005856 1.5e-17 95.9 162 42.0
PSO210G5284 Papaver somniferum HOM05D004847 ORTHO05D005856 2.0e-17 95.5 167 41.9
Sopen01g042820 Solanum pennellii HOM05D004847 ORTHO05D005856 3.4e-17 94.7 244 34.4
Duzib106G0633 Durio zibethinus HOM05D004847 ORTHO05D005856 4.5e-17 94.4 163 41.7
CiPaw.08G164900 Carya illinoinensis HOM05D004847 ORTHO05D005856 5.8e-17 94.0 165 42.4
Psat0s3135g0240 Pisum sativum HOM05D004847 ORTHO05D005856 5.8e-17 94.0 187 40.1
FAN05G5436 Fragaria x ananassa HOM05D004847 ORTHO05D005856 7.6e-17 93.6 166 44.0
FAN05G5722 Fragaria x ananassa HOM05D004847 ORTHO05D005856 7.6e-17 93.6 166 44.0
Potri.013G022600 Populus trichocarpa HOM05D004847 ORTHO05D005856 7.6e-17 93.6 164 40.9
Actinidia24643 Actinidia chinensis HOM05D004847 ORTHO05D005856 1.0e-16 93.2 164 41.5
Prupe.6G326100 Prunus persica HOM05D004847 ORTHO05D005856 1.0e-16 93.2 219 37.0
COL.COLO4_13475 Corchorus olitorius HOM05D004847 ORTHO05D005856 1.7e-16 92.4 164 39.6
FvH4_6g05820 Fragaria vesca HOM05D004847 ORTHO05D005856 1.7e-16 92.4 166 44.0
FAN14G3900 Fragaria x ananassa HOM05D004847 ORTHO05D005856 1.7e-16 92.4 166 44.0
TAR362G0189 Trochodendron aralioides HOM05D004847 ORTHO05D005856 1.7e-16 92.4 170 40.0
arahy.Tifrunner.gnm1.ann1.91A0PW Arachis hypogaea HOM05D004847 ORTHO05D005856 2.2e-16 92.0 143 43.4
Atru.chr2.410 Acer truncatum HOM05D004847 ORTHO05D005856 3.8e-16 91.3 184 39.7
Cc11_g03560 Coffea canephora HOM05D004847 ORTHO05D005856 3.8e-16 91.3 246 31.7
arahy.Tifrunner.gnm1.ann1.WTPV8B Arachis hypogaea HOM05D004847 ORTHO05D005856 4.9e-16 90.9 166 41.0
Gohir.A11G264800 Gossypium hirsutum HOM05D004847 ORTHO05D005856 4.9e-16 90.9 195 35.9
VMungo0720G3140 Vigna mungo HOM05D004847 ORTHO05D005856 4.9e-16 90.9 186 39.8
Glyma.19G235300 Glycine max HOM05D004847 ORTHO05D005856 6.5e-16 90.5 164 40.9
Glyma.20G234200 Glycine max HOM05D004847 ORTHO05D005856 6.5e-16 90.5 193 37.8
Lalb_Chr04g0260731 Lupinus albus HOM05D004847 ORTHO05D005856 6.5e-16 90.5 164 40.9
Nitab4.5_0000137g0030 Nicotiana tabacum HOM05D004847 ORTHO05D005856 6.5e-16 90.5 164 39.0
Solyc01g099270.2 Solanum lycopersicum HOM05D004847 ORTHO05D005856 6.5e-16 90.5 332 30.7
Peaxi162Scf00037g00632 Petunia axillaris HOM05D004847 ORTHO05D005856 8.4e-16 90.1 162 38.9
CAN.G1034.25 Capsicum annuum HOM05D004847 ORTHO05D005856 1.1e-15 89.7 325 29.5
Ca_10113_v3 Cicer arietinum L. HOM05D004847 ORTHO05D005856 1.1e-15 89.7 143 43.4
Haze_04198 Corylus avellana HOM05D004847 ORTHO05D005856 1.1e-15 89.7 166 41.6
MD12G1219500 Malus domestica HOM05D004847 ORTHO05D005856 1.1e-15 89.7 163 42.9
Nitab4.5_0003156g0010 Nicotiana tabacum HOM05D004847 ORTHO05D005856 1.1e-15 89.7 164 39.0
Duzib128G0091 Durio zibethinus HOM05D004847 ORTHO05D005856 1.4e-15 89.4 165 37.6
Eucgr.L01544 Eucalyptus grandis HOM05D004847 ORTHO05D005856 1.4e-15 89.4 166 39.8
Nn4g26247 Nelumbo nucifera HOM05D004847 ORTHO05D005856 1.4e-15 89.4 162 39.5
CSS0017838 Camellia sinensis var. sinensis HOM05D004847 ORTHO05D005856 1.9e-15 89.0 165 43.6
Migut.B01038 Erythranthe guttata HOM05D004847 ORTHO05D005856 1.9e-15 89.0 180 37.8
Hma1.2p1_0928F.1_g237810 Hydrangea macrophylla HOM05D004847 ORTHO05D005856 1.9e-15 89.0 164 40.9
MBI19_g05601_MAGBIO Magnolia biondii HOM05D004847 ORTHO05D005856 2.5e-15 88.6 165 40.0
PGR083G0144 Punica granatum HOM05D004847 ORTHO05D005856 2.5e-15 88.6 201 37.3
MD04G1205400 Malus domestica HOM05D004847 ORTHO05D005856 3.2e-15 88.2 163 41.7
SalBow3G4161 Salvia bowleyana HOM05D004847 ORTHO05D005856 3.2e-15 88.2 219 33.3
Sed0004129 Sechium edule HOM05D004847 ORTHO05D005856 3.2e-15 88.2 166 37.3
Dinv23942 Davidia involucrata HOM05D004847 ORTHO05D005856 4.2e-15 87.8 174 39.1
Potri.005G033200 Populus trichocarpa HOM05D004847 ORTHO05D005856 4.2e-15 87.8 180 37.2
TWI56G1294 Tripterygium wilfordii HOM05D004847 ORTHO05D005856 4.2e-15 87.8 378 28.6
CANSAT54G0893 Cannabis sativa HOM05D004847 ORTHO05D005856 5.5e-15 87.4 208 36.1
CsaV3_2G005250 Cucumis sativus L. HOM05D004847 ORTHO05D005856 5.5e-15 87.4 168 36.3
TWI12G0805 Tripterygium wilfordii HOM05D004847 ORTHO05D005856 5.5e-15 87.4 178 37.6
QL03p006978 Quercus lobata HOM05D004847 ORTHO05D005856 7.1e-15 87.0 141 42.6
GSVIVG01000048001 Vitis vinifera HOM05D004847 ORTHO05D005856 7.1e-15 87.0 162 40.1
CSS0010861 Camellia sinensis var. sinensis HOM05D004847 ORTHO05D005856 9.3e-15 86.7 175 39.4
Manes.09G166900 Manihot esculenta HOM05D004847 ORTHO05D005856 9.3e-15 86.7 163 40.5
Phvul.007G179800 Phaseolus vulgaris HOM05D004847 ORTHO05D005856 9.3e-15 86.7 143 42.7
Thecc.05G303800 Theobroma cacao HOM05D004847 ORTHO05D005856 9.3e-15 86.7 384 27.9
TAR633G0229 Trochodendron aralioides HOM05D004847 ORTHO05D005856 9.3e-15 86.7 162 40.7
MSTRG.27999 Avicennia marina HOM05D004847 ORTHO05D005856 1.2e-14 86.3 172 36.0
PGSC0003DMG401024742 Solanum tuberosum HOM05D004847 ORTHO05D005856 1.2e-14 86.3 326 29.8
Sabra05G0035400 Salix brachista HOM05D004847 ORTHO05D005856 2.1e-14 85.5 164 37.8
Aqoxy5G00505 Aquilegia oxysepala HOM05D004847 ORTHO05D005856 4.6e-14 84.3 165 39.4
Glyma.10G154100 Glycine max HOM05D004847 ORTHO05D005856 4.6e-14 84.3 194 36.6
Phvul.006G091600 Phaseolus vulgaris HOM05D004847 ORTHO05D005856 4.6e-14 84.3 165 38.2
RcHm_v2.0_Chr3g0454731 Rosa chinensis HOM05D004847 ORTHO05D005856 4.6e-14 84.3 166 41.6
TPR.G33190 Trifolium pratense HOM05D004847 ORTHO05D005856 4.6e-14 84.3 188 34.6
Medtr7g113510 Medicago truncatula HOM05D004847 ORTHO05D005856 6.0e-14 84.0 164 38.4
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 6.0e-14 84.0 189 36.5
BraSC132t45510Z Brassica rapa HOM05D004847 ORTHO05D005856 7.9e-14 83.6 167 37.1
Ciclev10003680m.g Citrus clementina HOM05D004847 ORTHO05D001311 1.8e-13 82.4 143 41.3
Gohir.D11G275000 Gossypium hirsutum HOM05D004847 ORTHO05D005856 1.8e-13 82.4 373 29.0
Gorai.007G296800 Gossypium raimondii HOM05D004847 ORTHO05D005856 1.8e-13 82.4 373 29.0
Sc16g0008460 Simmondsia chinensis HOM05D004847 ORTHO05D005856 1.8e-13 82.4 395 28.1
Gohir.A08G210800 Gossypium hirsutum HOM05D004847 ORTHO05D005856 5.1e-13 80.9 396 26.3
Sp3g04200 Schrenkiella parvula HOM05D004847 ORTHO05D005856 5.1e-13 80.9 172 33.7
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 8.7e-13 80.1 70 60.0
AT3G05330 Arabidopsis thaliana HOM05D004847 ORTHO05D005856 1.1e-12 79.7 172 34.9
BolC1t05700H Brassica oleracea HOM05D004847 ORTHO05D005856 1.5e-12 79.3 169 35.5
Lsat_1_v5_gn_9_123520 Lactuca sativa HOM05D004847 ORTHO05D005856 1.5e-12 79.3 188 34.6
MELO3C004268.2 Cucumis melo HOM05D004847 ORTHO05D005856 1.9e-12 79.0 170 35.9
Lj5A533T17 Lonicera japonica HOM05D004847 ORTHO05D005856 1.9e-12 79.0 164 36.6
A05p42290 Brassica napus HOM05D004847 ORTHO05D005856 2.5e-12 78.6 151 37.1
BraA05t23024Z Brassica rapa HOM05D004847 ORTHO05D005856 3.3e-12 78.2 151 37.1
Thhalv10020613m.g Eutrema salsugineum HOM05D004847 ORTHO05D005856 3.3e-12 78.2 171 33.3
CARHR079680 Cardamine hirsuta HOM05D004847 ORTHO05D005856 5.7e-12 77.4 163 34.4
Sabra13G0024700 Salix brachista HOM05D004847 ORTHO05D005856 7.4e-12 77.0 133 42.1
BcaC05g30154 Brassica carinata HOM05D004847 ORTHO05D005856 9.7e-12 76.6 147 35.4
Carub.0003s0461 Capsella rubella HOM05D004847 ORTHO05D005856 9.7e-12 76.6 172 33.7
HPP92_003277 Vanilla planifolia HOM05D004847 ORTHO05D005856 9.7e-12 76.6 139 38.1
Medtr1g082940 Medicago truncatula HOM05D004847 ORTHO05D005856 1.6e-11 75.9 130 41.5
AL3G15780 Arabidopsis lyrata HOM05D004847 ORTHO05D005856 2.1e-11 75.5 150 36.0
C05p61870 Brassica napus HOM05D004847 ORTHO05D005856 2.8e-11 75.1 151 37.7
BolC5t34847H Brassica oleracea HOM05D004847 ORTHO05D005856 2.8e-11 75.1 151 37.7
Hund07068 Selenicereus undatus HOM05D004847 ORTHO05D005856 3.7e-11 74.7 162 36.4
THA.LOC104818696 Tarenaya hassleriana HOM05D004847 ORTHO05D005856 3.7e-11 74.7 249 28.9
BcaC05g30136 Brassica carinata HOM05D004847 ORTHO05D005856 6.3e-11 73.9 123 38.2
AUR62000830 Chenopodium quinoa HOM05D004847 ORTHO05D005856 8.2e-11 73.6 185 33.5
BNapus_Darmor_BZH_scaffold_114p00170 Brassica napus HOM05D004847 ORTHO05D005856 1.8e-10 72.4 440 27.3
Ah.06g189340 Amaranthus hybridus HOM05D004847 ORTHO05D005856 3.1e-10 71.6 183 31.1
EL10Ac4g09352 Beta vulgaris HOM05D004847 ORTHO05D005856 4.1e-10 71.2 161 34.2
Lalb_Chr02g0148231 Lupinus albus HOM05D004847 ORTHO05D005856 5.3e-10 70.9 163 35.6
Glyma.03G237700 Glycine max HOM05D004847 ORTHO05D005856 6.9e-10 70.5 152 40.1
CiPaw.07G017600 Carya illinoinensis HOM05D004847 ORTHO05D005856 9.0e-10 70.1 130 40.8
AUR62005144 Chenopodium quinoa HOM05D004847 ORTHO05D005856 1.5e-09 69.3 163 35.0
vmacro19624 Vaccinium macrocarpon HOM05D004847 ORTHO05D005856 1.5e-09 69.3 509 25.1
HanXRQChr09g0248411 Helianthus annuus HOM05D004847 ORTHO05D005856 2.0e-09 68.9 161 31.1
DCAR_029413 Daucus carota HOM05D004847 ORTHO05D005856 4.5e-09 67.8 346 26.9
Migut.O00711 Erythranthe guttata HOM05D004847 ORTHO05D005856 7.6e-09 67.0 177 29.9
Zm00001eb286860 Zea mays HOM05D004847 ORTHO05D005856 7.6e-09 67.0 167 35.3
Lj5g0019148 Lotus japonicus HOM05D004847 ORTHO05D005856 2.9e-08 65.1 143 34.3
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 3.8e-08 64.7 115 39.1
DCAR_003332 Daucus carota HOM05D004847 ORTHO05D005856 6.5e-08 63.9 370 26.2
Migut.N02003 Erythranthe guttata HOM05D004847 ORTHO05D005856 2.5e-07 62.0 357 23.8
SGA_v2.0_scaffold80G25911 Striga asiatica HOM05D004847 ORTHO05D005856 3.2e-07 61.6 146 34.2
ECA240G3864 Erigeron canadensis HOM05D004847 ORTHO05D005856 1.2e-06 59.7 343 29.2
ClCG02G015810 Citrullus lanatus HOM05D000141 ORTHO05D001311 3.6e-06 58.2 116 37.1
CDE10G0375 Ceratophyllum demersum HOM05D004847 ORTHO05D005856 6.1e-06 57.4 130 38.5
VMungo0540G0069 Vigna mungo HOM05D004847 ORTHO05D005856 6.1e-06 57.4 164 28.7


User provided reference genes

Program Settings