Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.7e-194 681.0 345 100.0
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.0e-152 542.7 283 98.2
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.3e-103 380.6 305 63.3
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.7e-103 380.2 292 62.3
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.3e-100 369.8 293 61.4
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.0e-100 369.4 304 61.2
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 8.8e-100 367.9 305 61.0
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.2e-99 367.5 303 61.7
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.4e-99 365.5 305 60.7
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 5.7e-99 365.2 305 60.7
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.3e-98 364.0 305 59.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.3e-98 364.0 305 61.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.3e-98 364.0 305 61.3
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.7e-98 363.6 305 62.0
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.7e-98 363.6 305 61.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.7e-98 362.5 305 60.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 4.8e-98 362.1 304 61.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 6.3e-98 361.7 304 59.9
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.2e-98 361.3 303 60.1
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 8.2e-98 361.3 304 59.2
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 8.2e-98 361.3 305 60.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.2e-98 361.3 305 60.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.1e-97 360.9 304 58.6
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-97 360.5 306 59.5
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.4e-97 359.8 305 59.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 2.4e-97 359.8 305 59.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 3.1e-97 359.4 297 61.3
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 7.0e-97 358.2 305 60.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 9.1e-97 357.8 303 60.1
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 9.1e-97 357.8 305 59.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.2e-96 357.5 305 59.7
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.6e-96 357.1 304 60.9
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.6e-96 357.1 305 58.7
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.6e-96 357.1 306 60.1
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.6e-96 357.1 305 58.7
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 2.0e-96 356.7 304 60.5
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.5e-96 355.5 304 58.9
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 4.5e-96 355.5 304 59.9
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.5e-96 355.5 305 59.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.3e-95 354.0 305 59.3
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.3e-95 354.0 305 59.3
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.7e-95 353.6 304 59.5
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 2.2e-95 353.2 304 61.5
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.0e-95 352.1 304 58.6
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 5.0e-95 352.1 304 58.9
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 6.5e-95 351.7 304 57.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 6.5e-95 351.7 305 59.7
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 8.5e-95 351.3 306 58.2
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.1e-94 350.9 306 57.8
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.5e-94 350.5 306 59.8
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.5e-94 350.5 304 59.2
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.5e-94 350.5 306 60.1
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.5e-94 349.7 305 57.4
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.5e-94 349.7 305 57.4
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.2e-94 349.4 298 60.4
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 3.2e-94 349.4 304 58.6
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.2e-93 347.4 299 58.2
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.1e-93 346.7 300 57.7
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.6e-93 345.9 304 57.6
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 3.6e-93 345.9 304 57.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 3.6e-93 345.9 301 58.1
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 4.7e-93 345.5 304 59.9
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 6.1e-93 345.1 306 57.5
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 6.1e-93 345.1 304 57.9
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 8.0e-93 344.7 306 57.2
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 8.0e-93 344.7 306 56.9
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 8.0e-93 344.7 306 57.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 8.0e-93 344.7 306 57.2
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 8.0e-93 344.7 304 57.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.4e-92 344.0 298 60.1
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.8e-92 343.6 306 56.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.8e-92 343.6 306 56.9
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 2.3e-92 343.2 300 57.0
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.3e-92 343.2 305 57.0
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 4.0e-92 342.4 304 59.2
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 6.8e-92 341.7 304 57.2
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.2e-91 340.9 304 56.2
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 2.0e-91 340.1 298 59.4
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.6e-91 339.7 306 56.5
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 3.4e-91 339.3 300 57.0
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 4.4e-91 339.0 305 54.8
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.4e-91 339.0 306 57.8
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 4.4e-91 339.0 304 56.6
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 2.2e-90 336.7 306 57.2
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.2e-90 336.7 303 56.8
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 3.7e-90 335.9 306 56.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 4.8e-90 335.5 303 56.4
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 3.1e-89 332.8 306 56.5
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 5.9e-88 328.6 300 56.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 4.2e-86 322.4 286 59.4
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 8.0e-85 318.2 306 51.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 4.0e-84 315.8 293 54.3
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.0e-83 313.5 282 57.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.8e-82 309.7 304 53.0
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.3e-79 300.1 263 58.6
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 3.0e-76 289.7 247 59.9
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 8.9e-76 288.1 258 56.6
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.9e-74 283.1 248 57.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 4.1e-73 279.3 266 56.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 5.0e-71 272.3 263 54.4
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.2e-69 267.7 255 54.5
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.1e-68 264.6 228 60.1
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.7e-63 247.3 298 49.3
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.0e-60 236.1 196 59.2
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 4.4e-59 232.6 194 58.8
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.2e-57 226.5 296 44.6
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 7.1e-57 225.3 323 39.0
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 2.7e-56 223.4 219 54.3
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 7.3e-54 215.3 209 56.5
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.2e-51 208.0 364 34.6
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 4.4e-51 206.1 162 59.3
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 8.4e-42 175.3 309 36.2
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 3.4e-35 153.3 295 35.3
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.5e-32 143.3 145 56.6
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.1e-31 139.4 144 56.9
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-29 134.0 145 53.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.2e-27 128.3 104 55.8
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.9e-27 125.2 91 60.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.3e-26 124.8 330 28.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-26 124.4 140 55.0
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.5e-22 110.5 80 67.5
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 3.3e-22 110.2 259 32.8
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 9.3e-09 65.5 54 53.7


User provided reference genes

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