Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03047 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 2.0e-30 135.2 72 100.0
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 2.0e-09 65.5 47 72.3
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 2.5e-09 65.1 47 74.5
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 4.3e-09 64.3 47 68.1
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 4.3e-09 64.3 47 70.2
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 4.3e-09 64.3 47 70.2
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 4.3e-09 64.3 47 70.2
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 5.7e-09 63.9 47 72.3
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 5.7e-09 63.9 47 70.2
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 5.7e-09 63.9 47 70.2
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 5.7e-09 63.9 47 70.2
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 7.4e-09 63.5 47 70.2
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 7.4e-09 63.5 47 70.2
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.3e-08 62.8 47 68.1
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 1.7e-08 62.4 47 70.2
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 1.7e-08 62.4 47 70.2
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 1.7e-08 62.4 47 70.2
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 1.7e-08 62.4 47 70.2
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 1.7e-08 62.4 47 68.1
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 2.2e-08 62.0 47 68.1
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 2.2e-08 62.0 47 68.1
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 2.2e-08 62.0 47 68.1
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 2.8e-08 61.6 47 68.1
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 2.8e-08 61.6 47 80.9
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 3.7e-08 61.2 47 68.1
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 3.7e-08 61.2 47 68.1
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 4.8e-08 60.8 47 66.0
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 4.8e-08 60.8 47 68.1
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 4.8e-08 60.8 47 66.0
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 6.3e-08 60.5 47 68.1
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 8.2e-08 60.1 47 63.8
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 8.2e-08 60.1 47 63.8
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 8.2e-08 60.1 47 66.0
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.1e-07 59.7 47 72.3
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 1.4e-07 59.3 46 65.2
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 1.4e-07 59.3 48 70.8
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 1.8e-07 58.9 47 63.8
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 2.4e-07 58.5 47 63.8
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 2.4e-07 58.5 47 78.7
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 3.1e-07 58.2 47 68.1
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 3.1e-07 58.2 47 63.8
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 3.1e-07 58.2 47 68.1
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 3.1e-07 58.2 47 74.5
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 4.1e-07 57.8 48 68.8
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 5.3e-07 57.4 47 70.2
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 6.9e-07 57.0 47 59.6
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 9.1e-07 56.6 47 63.8
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 1.2e-06 56.2 33 78.8
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 2.6e-06 55.1 47 74.5
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 2.6e-06 55.1 47 74.5
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 3.4e-06 54.7 47 59.6
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 4.5e-06 54.3 47 66.0
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 5.9e-06 53.9 30 83.3
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 5.9e-06 53.9 47 74.5
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 5.9e-06 53.9 47 74.5
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 7.7e-06 53.5 47 74.5
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 7.7e-06 53.5 47 66.0


User provided reference genes

Program Settings