Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 6.3e-146 521.2 348 100.0
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 6.7e-39 165.6 75 98.7
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.2e-19 101.7 72 55.6
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 1.7e-18 97.8 72 55.6
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 2.9e-18 97.1 72 54.2
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 3.8e-18 96.7 72 54.2
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 6.5e-18 95.9 72 56.9
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 8.5e-18 95.5 72 52.8
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.1e-17 95.1 72 55.6
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.1e-17 95.1 72 54.2
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.1e-17 95.1 72 51.4
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 1.5e-17 94.7 72 52.8
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.5e-17 94.7 72 54.2
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 1.5e-17 94.7 72 54.2
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 55.6
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 55.6
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 52.8
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 52.8
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 56.9
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 52.8
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 52.8
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.9e-17 94.4 72 54.2
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 2.5e-17 94.0 72 52.8
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 2.5e-17 94.0 72 51.4
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 2.5e-17 94.0 72 52.8
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 3.2e-17 93.6 72 52.8
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 3.2e-17 93.6 72 52.8
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.2e-17 93.6 72 52.8
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.2e-17 93.6 72 52.8
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 3.2e-17 93.6 72 51.4
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 3.2e-17 93.6 72 51.4
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 52.8
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 52.8
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 52.8
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 52.8
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 50.0
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 52.8
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 4.2e-17 93.2 72 52.8
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 5.5e-17 92.8 72 52.8
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 5.5e-17 92.8 72 54.2
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 5.5e-17 92.8 72 50.0
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 7.2e-17 92.4 72 52.8
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 9.4e-17 92.0 63 58.7
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 9.4e-17 92.0 72 52.8
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 9.4e-17 92.0 72 51.4
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 9.4e-17 92.0 72 51.4
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 1.2e-16 91.7 72 51.4
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.2e-16 91.7 72 48.6
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.2e-16 91.7 72 48.6
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.6e-16 91.3 72 51.4
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 1.6e-16 91.3 72 50.0
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.6e-16 91.3 72 50.0
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 2.1e-16 90.9 72 51.4
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 2.1e-16 90.9 72 50.0
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 2.7e-16 90.5 72 48.6
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 2.7e-16 90.5 72 50.0
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 2.7e-16 90.5 72 52.8
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.7e-16 90.5 72 51.4
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 2.7e-16 90.5 72 48.6
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 3.6e-16 90.1 72 50.0
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.6e-16 90.1 72 52.8
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 3.6e-16 90.1 72 50.0
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 4.7e-16 89.7 72 47.2
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.7e-16 89.7 72 52.8
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 4.7e-16 89.7 72 50.0
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.1e-16 89.4 154 33.1
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 6.1e-16 89.4 154 33.1
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 6.1e-16 89.4 72 50.0
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 8.0e-16 89.0 154 34.4
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 1.0e-15 88.6 72 51.4
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.0e-15 88.6 72 51.4
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.0e-15 88.6 72 51.4
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.0e-15 88.6 154 33.1
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.0e-15 88.6 72 50.0
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.8e-15 87.8 72 48.6
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 1.8e-15 87.8 72 45.8
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.8e-15 87.8 154 32.5
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 2.3e-15 87.4 143 36.4
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 3.0e-15 87.0 72 51.4
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 3.0e-15 87.0 72 47.2
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 4.0e-15 86.7 72 47.2
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 4.0e-15 86.7 206 32.0
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 4.0e-15 86.7 66 59.1
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 5.2e-15 86.3 63 55.6
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.2e-14 85.1 72 50.0
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.2e-14 85.1 210 31.0
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 4.4e-14 83.2 206 29.6
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.3e-13 81.6 74 51.4
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 2.2e-13 80.9 74 47.3
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 8.2e-13 79.0 72 45.8
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 1.4e-12 78.2 72 45.8
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 7.0e-12 75.9 111 36.0
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 9.1e-12 75.5 84 41.7
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.7e-11 72.4 71 49.3
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 8.5e-10 68.9 121 30.6
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 8.0e-08 62.4 48 54.2
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.0e-07 62.0 81 37.0
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.6e-06 57.4 134 29.9


User provided reference genes

Program Settings