Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.2e-186 656.4 321 100.0
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.2e-186 656.4 321 100.0
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.1e-11 75.1 317 26.2
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.0e-09 68.6 222 26.6
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.8e-09 67.8 222 26.6
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 3.0e-09 67.0 216 27.3
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 6.7e-09 65.9 222 24.8
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 8.7e-09 65.5 233 28.8
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 8.7e-09 65.5 317 25.9
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.1e-08 65.1 225 26.7
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 1.5e-08 64.7 218 28.0
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.9e-08 64.3 326 23.3
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 3.3e-08 63.5 224 26.8
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.3e-08 63.5 222 26.6
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 3.3e-08 63.5 250 25.6
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 5.6e-08 62.8 266 25.2
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.6e-08 62.0 222 25.2
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 9.6e-08 62.0 226 26.1
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.3e-07 61.6 185 28.1
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.3e-07 61.6 233 26.6
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.6e-07 61.2 223 27.4
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 2.1e-07 60.8 263 24.0
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 3.7e-07 60.1 222 25.7
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.8e-07 59.7 216 24.5
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 4.8e-07 59.7 222 25.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 4.8e-07 59.7 246 26.8
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 6.2e-07 59.3 254 26.8
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 6.2e-07 59.3 226 24.8
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 8.1e-07 58.9 268 24.6
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 8.1e-07 58.9 214 24.3
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 8.1e-07 58.9 222 27.5
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.1e-06 58.5 222 25.2
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.1e-06 58.5 222 25.2
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.1e-06 58.5 221 24.9
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 1.4e-06 58.2 220 27.7
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.4e-06 58.2 224 25.4
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.8e-06 57.8 314 22.0
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 3.1e-06 57.0 223 26.0
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 5.3e-06 56.2 292 22.9
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 6.9e-06 55.8 260 25.0
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 9.0e-06 55.5 278 23.7
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 9.0e-06 55.5 217 26.7


User provided reference genes

Program Settings