Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 6.7e-213 743.8 389 100.0
SEGI_21803 Sequoiadendron giganteum HOM05D010022 ORTHO05D006570 3.5e-81 306.2 253 70.0
SEGI_31854 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 3.8e-59 233.0 262 50.4
SEGI_31457 Sequoiadendron giganteum HOM05D010022 ORTHO05D037593 3.0e-56 223.4 297 49.5
SEGI_13976 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 4.0e-56 223.0 276 52.2
SEGI_30336 Sequoiadendron giganteum HOM05D010022 ORTHO05D006570 1.2e-52 211.5 140 81.4
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 5.7e-39 166.0 105 76.2
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 5.7e-39 166.0 105 78.1
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 1.3e-38 164.9 105 77.1
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 1.3e-38 164.9 105 77.1
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 1.7e-38 164.5 98 79.6
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 1.7e-38 164.5 92 85.9
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 2.2e-38 164.1 105 75.2
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 2.2e-38 164.1 138 63.8
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 3.7e-38 163.3 92 83.7
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 3.7e-38 163.3 92 83.7
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 6.3e-38 162.5 95 81.1
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 8.3e-38 162.2 92 82.6
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 8.3e-38 162.2 92 82.6
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 1.1e-37 161.8 92 83.7
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 1.4e-37 161.4 92 82.6
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 2.4e-37 160.6 94 80.9
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 2.4e-37 160.6 92 84.8
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 2.4e-37 160.6 92 84.8
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 2.4e-37 160.6 92 81.5
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 3.1e-37 160.2 92 83.7
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 3.1e-37 160.2 92 82.6
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 4.1e-37 159.8 92 83.7
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 5.4e-37 159.5 92 82.6
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 9.1e-37 158.7 94 80.9
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 1.2e-36 158.3 94 79.8
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 1.6e-36 157.9 92 83.7
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 1.6e-36 157.9 92 83.7
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 1.6e-36 157.9 92 81.5
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 2.0e-36 157.5 105 73.3
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 2.0e-36 157.5 101 75.2
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 2.0e-36 157.5 116 69.8
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 2.7e-36 157.1 93 81.7
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 2.7e-36 157.1 98 77.6
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 3.5e-36 156.8 92 82.6
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 3.5e-36 156.8 92 80.4
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 4.5e-36 156.4 92 82.6
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 4.5e-36 156.4 92 83.7
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 5.9e-36 156.0 92 81.5
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 7.7e-36 155.6 134 61.9
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 7.7e-36 155.6 105 71.4
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 1.0e-35 155.2 105 73.3
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 1.0e-35 155.2 105 73.3
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 1.0e-35 155.2 105 73.3
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 1.0e-35 155.2 92 81.5
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.3e-35 154.8 92 79.3
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.3e-35 154.8 92 81.5
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 2.3e-35 154.1 105 72.4
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 2.3e-35 154.1 101 76.2
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 2.9e-35 153.7 101 76.2
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 2.9e-35 153.7 101 76.2
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 2.9e-35 153.7 117 67.5
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 3.8e-35 153.3 105 71.4
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 3.8e-35 153.3 92 80.4
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 5.0e-35 152.9 92 78.3
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 5.0e-35 152.9 106 72.6
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 6.6e-35 152.5 92 77.2
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 8.6e-35 152.1 105 71.4
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 1.1e-34 151.8 125 65.6
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 1.5e-34 151.4 92 78.3
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.5e-34 151.4 92 77.2
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 1.9e-34 151.0 105 72.4
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 1.9e-34 151.0 92 81.5
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 2.5e-34 150.6 116 64.7
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 3.3e-34 150.2 92 77.2
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 3.3e-34 150.2 92 77.2
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 3.3e-34 150.2 92 80.4
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 4.3e-34 149.8 118 65.3
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 5.6e-34 149.4 92 79.3
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 7.2e-34 149.1 130 60.8
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 9.5e-34 148.7 92 80.4
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 9.5e-34 148.7 92 78.3
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 9.5e-34 148.7 92 78.3
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 1.2e-33 148.3 92 77.2
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 1.2e-33 148.3 93 77.4
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 1.6e-33 147.9 92 80.4
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 2.1e-33 147.5 167 52.1
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 6.1e-33 146.0 92 79.3
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 3.0e-32 143.7 92 76.1
SEGI_02094 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 6.8e-32 142.5 93 79.6
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 2.0e-31 141.0 78 87.2
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 2.0e-31 141.0 95 72.6
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 2.9e-30 137.1 121 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 8.3e-30 135.6 82 80.5
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 7.0e-29 132.5 76 81.6
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 7.0e-29 132.5 83 78.3
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 9.2e-29 132.1 74 85.1
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 4.6e-28 129.8 77 83.1
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 1.0e-27 128.6 110 62.7
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 1.3e-27 128.3 77 83.1
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 3.0e-27 127.1 98 63.3
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.6e-25 121.3 77 77.9
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 4.7e-25 119.8 69 82.6
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 6.2e-25 119.4 76 77.6
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 8.9e-24 115.5 92 66.3
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.6e-23 114.0 67 83.6
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 1.7e-22 111.3 98 60.2
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.9e-22 110.5 65 83.1
SEGI_25681 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 1.1e-21 108.6 74 71.6
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 1.9e-21 107.8 75 68.0
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.9e-21 107.8 70 75.7
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 6.0e-20 102.8 77 70.1
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 3.3e-18 97.1 77 63.6
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 4.3e-18 96.7 61 80.3
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 4.3e-18 96.7 61 80.3
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 4.3e-18 96.7 61 80.3
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 1.2e-15 88.6 46 93.5
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 1.5e-15 88.2 53 71.7
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 4.4e-15 86.7 92 53.3
SEGI_00062 Sequoiadendron giganteum HOM05D001366 ORTHO05D016210 1.4e-13 81.6 172 32.6
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 2.4e-13 80.9 130 42.3
SEGI_21884 Sequoiadendron giganteum HOM05D009727 ORTHO05D001636 2.4e-13 80.9 141 37.6
SEGI_00703 Sequoiadendron giganteum HOM05D010022 ORTHO05D037593 3.0e-11 73.9 137 41.6
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.5e-10 71.6 42 81.0
SEGI_24647 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 8.1e-09 65.9 59 54.2
SEGI_03555 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 2.0e-07 61.2 59 52.5
SEGI_40973 Sequoiadendron giganteum HOM05D010022 ORTHO05D001636 2.0e-07 61.2 57 54.4
SEGI_39586 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 9.9e-07 58.9 49 53.1
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 1.3e-06 58.5 102 42.2


User provided reference genes

Program Settings