Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02888 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 2.0e-127 459.1 232 100.0
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 1.3e-41 174.1 224 44.6
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 1.6e-41 173.7 229 43.2
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 1.1e-40 171.0 223 43.0
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 3.1e-40 169.5 214 43.0
MBI11_g36316_MAGBIO Magnolia biondii HOM05D005223 ORTHO05D006449 7.6e-39 164.9 227 41.4
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 6.0e-36 155.2 220 40.9
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 1.0e-35 154.5 221 38.5
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 3.0e-35 152.9 225 40.0
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 2.5e-34 149.8 222 39.6
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 4.3e-34 149.1 216 39.4
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 9.6e-34 147.9 224 38.4
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 9.6e-34 147.9 224 38.4
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 9.6e-34 147.9 195 44.6
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 9.6e-34 147.9 223 40.4
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 2.1e-33 146.7 220 40.9
CSS0005553 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 2.8e-33 146.4 224 38.8
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 2.8e-33 146.4 221 40.7
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 2.8e-33 146.4 221 38.5
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 3.7e-33 146.0 220 38.6
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 4.8e-33 145.6 216 39.4
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 8.2e-33 144.8 226 38.1
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 1.1e-32 144.4 230 37.4
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 1.4e-32 144.1 220 38.2
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 2.4e-32 143.3 216 38.4
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 2.4e-32 143.3 222 36.5
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 3.1e-32 142.9 225 38.2
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 3.1e-32 142.9 256 35.5
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 4.0e-32 142.5 222 38.7
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 4.0e-32 142.5 222 38.7
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 5.3e-32 142.1 224 37.9
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 5.3e-32 142.1 221 37.6
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 6.9e-32 141.7 220 37.7
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 9.0e-32 141.4 221 39.4
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 1.5e-31 140.6 211 38.9
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 5.8e-31 138.7 222 35.6
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 5.8e-31 138.7 227 38.3
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 1.0e-30 137.9 221 38.0
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 1.0e-30 137.9 220 37.7
Actinidia19387 Actinidia chinensis HOM05D005223 ORTHO05D006449 1.3e-30 137.5 221 36.7
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 3.8e-30 136.0 224 35.7
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 3.8e-30 136.0 222 37.4
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 8.4e-30 134.8 220 38.6
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 1.4e-29 134.0 219 37.0
Oeu057221.1 Olea europaea HOM05D005223 ORTHO05D006449 1.4e-29 134.0 219 36.1
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 1.4e-29 134.0 208 36.5
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 4.2e-29 132.5 228 36.8
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 5.5e-29 132.1 222 35.6
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 1.2e-28 131.0 220 36.4
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 1.2e-28 131.0 219 36.1
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 2.1e-28 130.2 233 36.1
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 2.7e-28 129.8 223 33.6
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 2.7e-28 129.8 234 35.5
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 3.5e-28 129.4 219 37.9
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 3.5e-28 129.4 222 35.1
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 7.9e-28 128.3 223 34.1
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 1.0e-27 127.9 219 37.9
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 1.8e-27 127.1 215 37.2
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 2.3e-27 126.7 223 35.4
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 3.0e-27 126.3 223 33.2
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 3.0e-27 126.3 220 33.6
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 3.0e-27 126.3 220 35.5
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 3.0e-27 126.3 222 36.9
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 3.9e-27 125.9 223 33.2
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 3.9e-27 125.9 220 35.0
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 6.7e-27 125.2 231 32.5
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 6.7e-27 125.2 220 34.1
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 8.7e-27 124.8 223 35.0
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 8.7e-27 124.8 220 35.5
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 1.1e-26 124.4 220 35.0
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 1.9e-26 123.6 227 32.2
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 2.5e-26 123.2 223 34.5
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 3.3e-26 122.9 211 34.6
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 4.3e-26 122.5 219 36.1
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 4.3e-26 122.5 217 32.3
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 1.3e-25 120.9 220 34.1
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 2.8e-25 119.8 223 30.5
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 2.8e-25 119.8 223 34.5
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 2.8e-25 119.8 223 34.5
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 3.7e-25 119.4 224 33.9
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 6.3e-25 118.6 220 30.9
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 6.3e-25 118.6 219 36.1
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 4.1e-24 115.9 220 33.6
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 2.0e-23 113.6 221 31.2
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 7.6e-23 111.7 220 30.9
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 7.6e-23 111.7 220 34.1
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 4.2e-21 105.9 142 40.8
Pp3c24_17160 Physcomitrium patens HOM05D005223 ORTHO05D006449 3.6e-20 102.8 249 31.7
Aa31LG4G17050 Aethionema arabicum HOM05D005223 ORTHO05D006449 1.4e-19 100.9 187 32.1
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 1.8e-19 100.5 142 38.0
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 3.0e-19 99.8 222 32.4
Cpa.g.sc52.34 Carica papaya HOM05D005223 ORTHO05D006449 2.5e-18 96.7 164 34.1
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 7.4e-18 95.1 130 41.5
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 9.7e-18 94.7 251 30.7
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 1.3e-17 94.4 220 31.4
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 2.8e-17 93.2 221 30.3
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.1e-16 91.3 133 42.1
Mapoly0075s0016 Marchantia polymorpha HOM05D005223 ORTHO05D006449 2.4e-16 90.1 265 29.1
AagrBONN_evm.TU.Sc2ySwM_228.970 Anthoceros agrestis HOM05D005223 ORTHO05D006449 1.5e-15 87.4 243 29.6
FvH4_3g25520 Fragaria vesca HOM05D005223 ORTHO05D006449 5.9e-15 85.5 151 37.1
FvH4_5g07460 Fragaria vesca HOM05D005223 ORTHO05D006449 5.9e-15 85.5 231 28.6
SMO367G0489 Selaginella moellendorffii HOM05D005223 ORTHO05D006449 8.5e-14 81.6 126 39.7
FvH4_5g07361 Fragaria vesca HOM05D005223 ORTHO05D006449 1.8e-11 73.9 143 35.7
CBR_g52378 Chara braunii HOM05D005223 ORTHO05D006449 9.7e-10 68.2 199 29.6
CBR_g45764 Chara braunii HOM05D005223 ORTHO05D006449 3.7e-09 66.2 199 28.6
QL10p005098 Quercus lobata HOM05D005223 ORTHO05D006449 3.1e-08 63.2 177 28.8
RcHm_v2.0_Chr1g0339741 Rosa chinensis HOM05D005223 ORTHO05D006449 8.5e-06 55.1 66 45.5


User provided reference genes

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