Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02854 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 3.3e-104 381.7 193 100.0
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 6.2e-18 95.1 70 67.1
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 8.1e-18 94.7 70 67.1
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 1.1e-17 94.4 70 67.1
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 3.1e-17 92.8 70 65.7
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 3.1e-17 92.8 70 65.7
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 4.0e-17 92.4 79 57.0
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 4.0e-17 92.4 70 65.7
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 6.8e-17 91.7 70 65.7
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 6.8e-17 91.7 70 64.3
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 1.2e-16 90.9 70 64.3
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 2.0e-16 90.1 70 64.3
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.6e-16 89.7 70 65.7
Cpa.g.sc1346.1 Carica papaya HOM05D004252 ORTHO05D005101 2.6e-16 89.7 70 65.7
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 2.6e-16 89.7 70 62.9
Sopen00g013550 Solanum pennellii HOM05D004252 ORTHO05D005101 2.6e-16 89.7 70 62.9
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 2.6e-16 89.7 70 64.3
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 3.4e-16 89.4 70 64.3
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 3.4e-16 89.4 70 64.3
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 3.4e-16 89.4 70 62.9
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 3.4e-16 89.4 70 64.3
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 4.4e-16 89.0 70 64.3
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 5.8e-16 88.6 70 61.4
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 5.8e-16 88.6 70 64.3
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 5.8e-16 88.6 70 64.3
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 5.8e-16 88.6 70 64.3
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 5.8e-16 88.6 70 62.9
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 5.8e-16 88.6 70 64.3
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 7.5e-16 88.2 70 64.3
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 9.8e-16 87.8 73 61.6
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 1.3e-15 87.4 70 62.9
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 1.7e-15 87.0 69 60.9
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 2.2e-15 86.7 70 62.9
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 2.2e-15 86.7 70 61.4
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 2.2e-15 86.7 70 64.3
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 2.2e-15 86.7 70 62.9
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 2.2e-15 86.7 70 62.9
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 2.9e-15 86.3 70 62.9
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 2.9e-15 86.3 70 61.4
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 2.9e-15 86.3 70 62.9
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 3.7e-15 85.9 69 59.4
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 3.7e-15 85.9 70 62.9
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 4.9e-15 85.5 69 63.8
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 4.9e-15 85.5 70 58.6
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 4.9e-15 85.5 70 61.4
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 61.4
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 58.6
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 8.3e-15 84.7 69 59.4
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 8.3e-15 84.7 69 58.0
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 60.0
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 64.3
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 61.4
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 61.4
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 8.3e-15 84.7 70 61.4
CAN.G1116.5 Capsicum annuum HOM05D004252 ORTHO05D005101 1.1e-14 84.3 70 58.6
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 1.4e-14 84.0 69 62.3
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 1.9e-14 83.6 70 60.0
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 1.9e-14 83.6 70 60.0
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 2.4e-14 83.2 70 60.0
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 2.4e-14 83.2 70 60.0
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 2.4e-14 83.2 70 55.7
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 2.4e-14 83.2 70 62.9
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 3.2e-14 82.8 75 54.7
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 3.2e-14 82.8 69 60.9
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 4.1e-14 82.4 77 58.4
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 4.1e-14 82.4 77 58.4
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 4.1e-14 82.4 70 55.7
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 4.1e-14 82.4 75 54.7
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 4.1e-14 82.4 75 54.7
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 4.1e-14 82.4 76 55.3
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 4.1e-14 82.4 75 54.7
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 5.4e-14 82.0 75 54.7
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 5.4e-14 82.0 75 54.7
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 5.4e-14 82.0 70 55.7
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 5.4e-14 82.0 75 54.7
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 7.1e-14 81.6 77 55.8
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 7.1e-14 81.6 71 60.6
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 9.2e-14 81.3 75 53.3
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 9.2e-14 81.3 69 56.5
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 1.2e-13 80.9 70 58.6
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 1.2e-13 80.9 70 58.6
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 1.2e-13 80.9 75 53.3
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 1.2e-13 80.9 70 54.3
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 1.2e-13 80.9 71 59.2
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 2.1e-13 80.1 70 60.0
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 2.1e-13 80.1 71 60.6
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 2.1e-13 80.1 71 57.7
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 2.7e-13 79.7 92 47.8
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 2.7e-13 79.7 75 57.3
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 3.5e-13 79.3 70 55.7
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 3.5e-13 79.3 71 59.2
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 3.5e-13 79.3 66 63.6
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 3.5e-13 79.3 75 52.0
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 4.6e-13 79.0 76 52.6
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 6.0e-13 78.6 71 56.3
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 6.0e-13 78.6 71 56.3
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 6.0e-13 78.6 71 56.3
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 7.8e-13 78.2 80 56.2
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 1.0e-12 77.8 70 54.3
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.0e-12 77.8 69 56.5
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.0e-12 77.8 69 56.5
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 1.0e-12 77.8 71 56.3
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.0e-12 77.8 71 54.9
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 1.0e-12 77.8 70 51.4
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 2.3e-12 76.6 69 56.5
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 2.3e-12 76.6 78 56.4
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 2.3e-12 76.6 79 50.6
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 3.0e-12 76.3 75 50.7
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 3.9e-12 75.9 90 50.0
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 3.9e-12 75.9 82 51.2
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 8.6e-12 74.7 67 62.7
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 1.9e-11 73.6 79 49.4
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 5.6e-11 72.0 69 52.2
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.6e-10 70.5 58 62.1
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 2.3e-09 66.6 66 57.6
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 8.9e-09 64.7 63 58.7
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 1.2e-08 64.3 83 45.8
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 1.2e-08 64.3 63 54.0
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 2.6e-08 63.2 63 57.1


User provided reference genes

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