Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 2.1e-299 1031.6 510 100.0
SEGI_41596 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.1e-77 293.5 178 83.7
SEGI_26766 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.7e-63 246.1 193 66.3
SEGI_04397 Sequoiadendron giganteum HOM05D000200 ORTHO05D000262 1.0e-40 172.2 248 44.0
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 3.9e-27 127.1 161 44.1
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 4.3e-26 123.6 86 68.6
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 5.6e-26 123.2 147 49.7
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 9.5e-26 122.5 86 68.6
SEGI_02211 Sequoiadendron giganteum HOM05D009239 ORTHO05D026139 1.2e-25 122.1 389 30.1
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.1e-25 121.3 86 67.4
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.6e-25 120.6 87 66.7
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 3.6e-25 120.6 180 42.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 4.7e-25 120.2 87 65.5
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.7e-25 120.2 91 63.7
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.1e-24 119.0 88 67.0
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.1e-24 119.0 84 66.7
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.4e-24 118.6 87 64.4
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.8e-24 118.2 84 66.7
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.8e-24 118.2 84 66.7
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 2.3e-24 117.9 84 65.5
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.3e-24 117.9 154 44.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 2.3e-24 117.9 86 67.4
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 3.1e-24 117.5 86 65.1
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 3.1e-24 117.5 87 64.4
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 3.1e-24 117.5 86 65.1
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 4.0e-24 117.1 86 62.8
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 5.2e-24 116.7 115 54.8
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 5.2e-24 116.7 87 64.4
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 5.2e-24 116.7 89 61.8
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 5.2e-24 116.7 96 59.4
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 8.9e-24 115.9 86 64.0
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 8.9e-24 115.9 96 60.4
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 8.9e-24 115.9 86 66.3
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 8.9e-24 115.9 84 65.5
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 8.9e-24 115.9 159 45.3
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.2e-23 115.5 128 51.6
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.2e-23 115.5 96 60.4
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.5e-23 115.2 86 65.1
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.5e-23 115.2 86 65.1
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.5e-23 115.2 84 64.3
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 2.0e-23 114.8 86 62.8
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 2.0e-23 114.8 87 60.9
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 2.6e-23 114.4 86 65.1
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.6e-23 114.4 86 65.1
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 2.6e-23 114.4 84 64.3
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.6e-23 114.4 84 64.3
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.6e-23 114.4 181 41.4
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 3.4e-23 114.0 86 61.6
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.4e-23 114.0 84 63.1
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 3.4e-23 114.0 84 63.1
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.4e-23 114.0 134 47.8
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 3.4e-23 114.0 86 65.1
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.4e-23 113.6 120 52.5
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 4.4e-23 113.6 87 63.2
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 4.4e-23 113.6 86 64.0
SEGI_19161 Sequoiadendron giganteum HOM05D009239 ORTHO05D014795 4.4e-23 113.6 405 28.6
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 5.8e-23 113.2 96 59.4
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 5.8e-23 113.2 84 63.1
SEGI_34916 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 5.8e-23 113.2 334 30.2
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 7.5e-23 112.8 86 62.8
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 9.9e-23 112.5 86 61.6
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.3e-22 112.1 86 61.6
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.3e-22 112.1 84 63.1
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.3e-22 112.1 121 52.1
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.7e-22 111.7 84 61.9
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 1.7e-22 111.7 87 58.6
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.7e-22 111.7 86 61.6
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.7e-22 111.7 189 40.2
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.2e-22 111.3 87 60.9
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.2e-22 111.3 87 59.8
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.2e-22 111.3 86 62.8
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 2.2e-22 111.3 84 61.9
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 2.9e-22 110.9 86 61.6
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.9e-22 110.9 86 61.6
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 2.9e-22 110.9 86 61.6
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 3.7e-22 110.5 96 57.3
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 3.7e-22 110.5 89 57.3
SEGI_40446 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.7e-22 110.5 79 70.9
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 1.1e-21 109.0 103 54.4
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.4e-21 108.6 86 60.5
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.4e-21 108.6 86 60.5
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.9e-21 108.2 87 60.9
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 4.1e-21 107.1 125 44.8
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.1e-21 106.3 92 58.7
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 9.2e-21 105.9 104 53.8
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.2e-20 105.5 86 60.5
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.6e-20 105.1 124 46.8
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.6e-20 105.1 142 44.4
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 3.5e-20 104.0 82 59.8
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 4.6e-20 103.6 88 58.0
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 4.6e-20 103.6 86 58.1
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 6.0e-20 103.2 88 59.1
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 7.8e-20 102.8 86 55.8
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 7.8e-20 102.8 86 59.3
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.3e-19 102.1 89 59.6
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.3e-19 102.1 80 61.2
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.7e-19 101.7 86 58.1
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.7e-19 101.7 84 57.1
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 2.3e-19 101.3 128 42.2
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 2.3e-19 101.3 86 55.8
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 3.9e-19 100.5 89 52.8
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.1e-18 99.0 92 52.2
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.5e-18 98.6 112 46.4
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 4.3e-18 97.1 112 45.5
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 5.6e-18 96.7 88 54.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 5.6e-18 96.7 88 54.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 5.6e-18 96.7 88 54.5
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 7.3e-18 96.3 115 47.8
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 7.3e-18 96.3 115 47.8
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.2e-17 95.5 114 46.5
SEGI_12076 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 4.7e-17 93.6 89 57.3
SEGI_28566 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 3.1e-16 90.9 99 51.5
SEGI_35863 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 4.0e-16 90.5 89 55.1
SEGI_01165 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 8.9e-16 89.4 87 56.3
SEGI_35495 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 1.5e-15 88.6 89 52.8
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 4.4e-15 87.0 66 62.1
SEGI_17545 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 5.8e-15 86.7 79 59.5
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 7.6e-15 86.3 86 52.3
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 7.6e-15 86.3 91 50.5
SEGI_23597 Sequoiadendron giganteum HOM05D009239 ORTHO05D005806 7.6e-15 86.3 87 55.2
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 6.4e-14 83.2 83 47.0
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.5e-12 77.4 108 43.5
SEGI_05454 Sequoiadendron giganteum HOM05D001144 ORTHO05D003139 2.3e-11 74.7 105 40.0
SEGI_08500 Sequoiadendron giganteum HOM05D000238 ORTHO05D001156 8.7e-11 72.8 77 53.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 1.4e-08 65.5 64 48.4
SEGI_30859 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.1e-08 64.3 91 31.9
SEGI_04939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 5.3e-08 63.5 83 32.5
SEGI_12759 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.0e-07 61.6 135 28.9
SEGI_03795 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.6e-07 61.2 91 30.8
SEGI_25885 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.6e-07 61.2 60 51.7
SEGI_24147 Sequoiadendron giganteum HOM05D003314 ORTHO05D026139 3.4e-07 60.8 115 40.9
SEGI_18611 Sequoiadendron giganteum HOM05D004235 ORTHO05D005157 4.4e-07 60.5 87 46.0
SEGI_24229 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 9.9e-07 59.3 59 52.5
SEGI_17736 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.9e-06 57.0 105 27.6
SEGI_18998 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 6.4e-06 56.6 91 30.8


User provided reference genes

Program Settings